Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g032840 Solanum pennellii HOM05D006936 ORTHO05D008273 1.1e-90 336.7 168 100.0
PGSC0003DMG401022215 Solanum tuberosum HOM05D006936 ORTHO05D008273 3.1e-90 335.1 168 98.8
Solyc07g064640.3 Solanum lycopersicum HOM05D006936 ORTHO05D008273 1.5e-89 332.8 168 97.6
CAN.G337.138 Capsicum annuum HOM05D006936 ORTHO05D008273 6.0e-70 267.7 168 81.0
Peaxi162Scf00235g00220 Petunia axillaris HOM05D006936 ORTHO05D008273 1.9e-68 262.7 197 72.1
Nitab4.5_0003495g0030 Nicotiana tabacum HOM05D006936 ORTHO05D008273 1.7e-64 249.6 133 91.0
Nitab4.5_0007360g0030 Nicotiana tabacum HOM05D006936 ORTHO05D008273 1.9e-63 246.1 133 88.0
Thecc.07G035400 Theobroma cacao HOM05D006936 ORTHO05D008273 1.0e-61 240.4 178 68.0
Gorai.002G089200 Gossypium raimondii HOM05D006936 ORTHO05D008273 3.0e-61 238.8 178 68.5
Manes.03G129900 Manihot esculenta HOM05D006936 ORTHO05D008273 3.9e-61 238.4 169 70.4
Gohir.D01G067300 Gossypium hirsutum HOM05D006936 ORTHO05D008273 8.7e-61 237.3 178 68.5
BcaC07g38260 Brassica carinata HOM05D006936 ORTHO05D008273 2.5e-60 235.7 186 64.5
Duzib213G0701 Durio zibethinus HOM05D006936 ORTHO05D008273 2.5e-60 235.7 178 69.7
Hma1.2p1_0738F.1_g211120 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 5.7e-60 234.6 188 64.4
Hma1.2p1_2518F.1_g323766 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 5.7e-60 234.6 188 64.4
AL7G25870 Arabidopsis lyrata HOM05D006936 ORTHO05D008273 1.3e-59 233.4 185 64.3
MSTRG.12976 Avicennia marina HOM05D006936 ORTHO05D008273 2.8e-59 232.3 192 65.6
Carub.0007s1390 Capsella rubella HOM05D006936 ORTHO05D008273 2.8e-59 232.3 186 64.0
AT4G26965 Arabidopsis thaliana HOM05D006936 ORTHO05D008273 3.7e-59 231.9 185 64.3
Cpa.g.sc12.300 Carica papaya HOM05D006936 ORTHO05D008273 3.7e-59 231.9 183 66.1
Sp7g24910 Schrenkiella parvula HOM05D006936 ORTHO05D008273 6.3e-59 231.1 186 64.5
THA.LOC104813424 Tarenaya hassleriana HOM05D006936 ORTHO05D008273 8.2e-59 230.7 189 63.0
GSVIVG01037658001 Vitis vinifera HOM05D006936 ORTHO05D008273 1.4e-58 229.9 175 69.7
CSS0049611 Camellia sinensis var. sinensis HOM05D006936 ORTHO05D008273 4.1e-58 228.4 187 64.2
C08p10070 Brassica napus HOM05D006936 ORTHO05D008273 5.3e-58 228.0 186 64.0
BolC8t48685H Brassica oleracea HOM05D006936 ORTHO05D008273 5.3e-58 228.0 186 64.0
Migut.H01824 Erythranthe guttata HOM05D006936 ORTHO05D008273 9.0e-58 227.3 181 64.6
Gohir.A01G080100 Gossypium hirsutum HOM05D006936 ORTHO05D008273 9.0e-58 227.3 178 67.4
Potri.003G122100 Populus trichocarpa HOM05D006936 ORTHO05D008273 1.2e-57 226.9 184 64.1
BcaNung03571 Brassica carinata HOM05D006936 ORTHO05D008273 2.0e-57 226.1 186 62.4
BcaB03g12517 Brassica carinata HOM05D006936 ORTHO05D008273 4.5e-57 224.9 188 63.3
Haze_09683 Corylus avellana HOM05D006936 ORTHO05D008273 4.5e-57 224.9 186 64.0
Cc05_g13850 Coffea canephora HOM05D006936 ORTHO05D008273 7.7e-57 224.2 187 62.0
TAR624G1327 Trochodendron aralioides HOM05D006936 ORTHO05D008273 1.0e-56 223.8 190 64.2
TWI39G1260 Tripterygium wilfordii HOM05D006936 ORTHO05D008273 1.3e-56 223.4 184 64.1
CiPaw.11G190300 Carya illinoinensis HOM05D006936 ORTHO05D008273 1.7e-56 223.0 185 64.3
Ciclev10009642m.g Citrus clementina HOM05D006936 ORTHO05D008273 3.8e-56 221.9 183 65.6
DCAR_022566 Daucus carota HOM05D006936 ORTHO05D008273 3.8e-56 221.9 187 61.0
C01p23100 Brassica napus HOM05D006936 ORTHO05D008273 5.0e-56 221.5 186 62.4
unitig_8.g4785 Utricularia gibba HOM05D006936 ORTHO05D008273 5.0e-56 221.5 170 64.1
Eucgr.F03471 Eucalyptus grandis HOM05D006936 ORTHO05D008273 1.4e-55 219.9 184 60.3
MD11G1216700 Malus domestica HOM05D006936 ORTHO05D008273 1.9e-55 219.5 184 62.0
SGA_v2.0_scaffold8G04322 Striga asiatica HOM05D006936 ORTHO05D008273 2.5e-55 219.2 187 62.6
HPP92_004131 Vanilla planifolia HOM05D006936 ORTHO05D008273 2.5e-55 219.2 174 63.8
A01p18140 Brassica napus HOM05D006936 ORTHO05D008273 5.5e-55 218.0 189 60.8
PSO210G5704 Papaver somniferum HOM05D006936 ORTHO05D008273 5.5e-55 218.0 183 62.8
Aqoxy3G01790 Aquilegia oxysepala HOM05D006936 ORTHO05D008273 7.2e-55 217.6 195 62.1
PSO832G3825 Papaver somniferum HOM05D006936 ORTHO05D008273 7.2e-55 217.6 174 64.9
BolC1t02244H Brassica oleracea HOM05D006936 ORTHO05D008273 1.2e-54 216.9 200 58.5
Ca_19852_v3 Cicer arietinum L. HOM05D006936 ORTHO05D008273 1.2e-54 216.9 185 61.1
RcHm_v2.0_Chr5g0040171 Rosa chinensis HOM05D006936 ORTHO05D008273 2.7e-54 215.7 183 61.2
HanXRQChr03g0076461 Helianthus annuus HOM05D006936 ORTHO05D008273 3.6e-54 215.3 188 60.1
BraA01t01769Z Brassica rapa HOM05D006936 ORTHO05D008273 6.1e-54 214.5 197 58.4
Lj6g0001928 Lotus japonicus HOM05D006936 ORTHO05D008273 6.1e-54 214.5 184 64.1
VMungo0540G1312 Vigna mungo HOM05D006936 ORTHO05D008273 6.1e-54 214.5 184 62.5
ClCG10G005400 Citrullus lanatus HOM05D006936 ORTHO05D008273 1.4e-53 213.4 184 61.4
Phvul.006G044500 Phaseolus vulgaris HOM05D006936 ORTHO05D008273 2.3e-53 212.6 184 61.4
Medtr3g052260 Medicago truncatula HOM05D006936 ORTHO05D008273 3.0e-53 212.2 184 59.8
Glyma.18G095900 Glycine max HOM05D006936 ORTHO05D008273 5.1e-53 211.5 183 60.7
Prupe.4G214700 Prunus persica HOM05D006936 ORTHO05D008273 5.1e-53 211.5 184 59.2
FvH4_3g22870 Fragaria vesca HOM05D006936 ORTHO05D008273 6.7e-53 211.1 180 62.2
FAN11G3489 Fragaria x ananassa HOM05D006936 ORTHO05D008273 6.7e-53 211.1 180 62.2
Glyma.08G317000 Glycine max HOM05D006936 ORTHO05D008273 8.8e-53 210.7 184 62.0
Lsat_1_v5_gn_9_93840 Lactuca sativa HOM05D006936 ORTHO05D008273 8.8e-53 210.7 183 58.5
TPR.G33779 Trifolium pratense HOM05D006936 ORTHO05D008273 2.0e-52 209.5 185 58.9
CsaV3_3G005130 Cucumis sativus L. HOM05D006936 ORTHO05D008273 3.3e-52 208.8 184 60.9
PGR031G2182 Punica granatum HOM05D006936 ORTHO05D008273 3.3e-52 208.8 184 58.7
FAN21G0204 Fragaria x ananassa HOM05D006936 ORTHO05D008273 4.3e-52 208.4 180 60.0
TWI38G2356 Tripterygium wilfordii HOM05D006936 ORTHO05D008273 4.3e-52 208.4 183 61.2
Sc16g0005990 Simmondsia chinensis HOM05D006936 ORTHO05D008273 1.3e-51 206.8 189 58.7
Lalb_Chr20g0113821 Lupinus albus HOM05D006936 ORTHO05D008273 2.8e-51 205.7 187 60.4
Potri.001G109600 Populus trichocarpa HOM05D006936 ORTHO05D008273 2.8e-51 205.7 183 61.7
BraA08t34018Z Brassica rapa HOM05D006936 ORTHO05D008273 6.3e-51 204.5 225 53.3
Psat5g178440 Pisum sativum HOM05D006936 ORTHO05D008273 8.2e-51 204.1 186 57.0
Thhalv10026517m.g Eutrema salsugineum HOM05D006936 ORTHO05D008273 1.4e-50 203.4 134 73.9
ECA240G2843 Erigeron canadensis HOM05D006936 ORTHO05D008273 1.8e-50 203.0 172 62.8
EL10Ac4g07798 Beta vulgaris HOM05D006936 ORTHO05D008273 4.1e-50 201.8 188 59.0
A08p20640 Brassica napus HOM05D006936 ORTHO05D008273 6.9e-50 201.1 152 68.4
Os09g0500200 Oryza sativa ssp. japonica HOM05D006936 ORTHO05D008273 4.5e-49 198.4 182 60.4
Rhsim06G0217500 Rhododendron simsii HOM05D000228 ORTHO05D001122 4.5e-49 198.4 151 68.2
Oeu048401.1 Olea europaea HOM05D006936 ORTHO05D008273 1.3e-48 196.8 128 74.2
QL08p009960 Quercus lobata HOM05D006936 ORTHO05D008273 9.4e-47 190.7 230 47.8
arahy.Tifrunner.gnm1.ann1.MX8M57 Arachis hypogaea HOM05D006936 ORTHO05D008273 1.6e-46 189.9 151 62.9
arahy.Tifrunner.gnm1.ann1.HAV09U Arachis hypogaea HOM05D006936 ORTHO05D008273 3.6e-46 188.7 151 62.9
Cfa020336 Carpinus fangiana HOM05D000228 ORTHO05D001122 2.3e-45 186.0 171 58.5
Hma1.2p1_0738F.1_g211130 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 3.9e-45 185.3 137 70.1
Zm00001eb102230 Zea mays HOM05D006936 ORTHO05D008273 5.1e-45 184.9 182 57.7
FAN16G3045 Fragaria x ananassa HOM05D006936 ORTHO05D008273 2.0e-44 183.0 202 54.0
Sed0005355 Sechium edule HOM05D006936 ORTHO05D008273 2.6e-44 182.6 128 69.5
Sabra01G0082900 Salix brachista HOM05D006936 ORTHO05D008273 5.7e-44 181.4 150 64.0
ATR1094G005 Amborella trichopoda HOM05D006936 ORTHO05D008273 4.1e-42 175.3 143 63.6
CARHR234570 Cardamine hirsuta HOM05D006936 ORTHO05D008273 5.3e-42 174.9 151 60.9
Aa31LG5G12010 Aethionema arabicum HOM05D006936 ORTHO05D008273 2.6e-41 172.6 183 54.6
Nn1g03514 Nelumbo nucifera HOM05D006936 ORTHO05D008273 5.9e-41 171.4 189 52.4
CDE05G0574 Ceratophyllum demersum HOM05D006936 ORTHO05D008273 7.7e-41 171.0 132 66.7
MELO3C025377.2 Cucumis melo HOM05D006936 ORTHO05D008273 8.5e-40 167.5 189 51.3
MBI02_g21871_MAGBIO Magnolia biondii HOM05D006936 ORTHO05D008273 2.1e-38 162.9 218 46.3
Atru.chr2.3444 Acer truncatum HOM05D006936 ORTHO05D008273 2.7e-38 162.5 98 77.6
CANSAT11G0469 Cannabis sativa HOM05D006936 ORTHO05D008273 1.8e-37 159.8 187 50.8
Sabra18G0079500 Salix brachista HOM05D006936 ORTHO05D008273 2.8e-35 152.5 118 62.7
vmacro02233 Vaccinium macrocarpon HOM05D006936 ORTHO05D008273 2.8e-35 152.5 93 74.2
Dinv40761 Davidia involucrata HOM05D006936 ORTHO05D008273 9.1e-34 147.5 135 60.7
Hund23239 Selenicereus undatus HOM05D006936 ORTHO05D008273 1.9e-31 139.8 189 43.4
Actinidia24797 Actinidia chinensis HOM05D006936 ORTHO05D008273 3.2e-31 139.0 126 61.9
Hma1.2p1_0738F.1_g211110 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 3.0e-29 132.5 74 75.7
Os05g0538900 Oryza sativa ssp. japonica HOM05D006936 ORTHO05D008273 1.8e-26 123.2 90 68.9
AUR62020430 Chenopodium quinoa HOM05D006936 ORTHO05D008273 1.2e-25 120.6 218 40.4
Hma1.2p1_0738F.1_g211140 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 2.7e-22 109.4 122 54.1
Hma1.2p1_2518F.1_g323762 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 2.7e-22 109.4 122 54.1
Mapoly0093s0007 Marchantia polymorpha HOM05D006936 ORTHO05D008273 1.8e-21 106.7 163 40.5
Pp3c15_25830 Physcomitrium patens HOM05D006936 ORTHO05D008273 1.3e-19 100.5 154 39.0
Ah.06g185850 Amaranthus hybridus HOM05D006936 ORTHO05D008273 4.3e-15 85.5 112 51.8
arahy.Tifrunner.gnm1.ann1.XX62UZ Arachis hypogaea HOM05D006936 ORTHO05D008273 3.6e-14 82.4 111 51.4
AUR62015785 Chenopodium quinoa HOM05D000355 ORTHO05D000227 1.7e-08 63.5 109 41.3
SEGI_32271 Sequoiadendron giganteum HOM05D006301 ORTHO05D008273 1.5e-07 60.5 45 62.2
DCAR_000990 Daucus carota HOM05D006936 ORTHO05D008273 4.3e-07 58.9 66 56.1
Cre09.g401150 Chlamydomonas reinhardtii HOM05D006936 ORTHO05D008273 1.6e-06 57.0 160 27.5


User provided reference genes

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