Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g031710 Solanum pennellii HOM05D000461 ORTHO05D009042 1.5e-92 342.8 170 100.0
Solyc07g063530.3 Solanum lycopersicum HOM05D000461 ORTHO05D009042 4.3e-92 341.3 170 99.4
Nitab4.5_0000297g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 7.5e-76 287.3 178 79.2
Dinv08335 Davidia involucrata HOM05D000461 ORTHO05D009042 1.5e-71 273.1 170 76.5
Cfa020516 Carpinus fangiana HOM05D000461 ORTHO05D009768 5.2e-69 264.6 170 73.5
CSS0025788 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 8.8e-69 263.8 170 74.1
Nitab4.5_0002565g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 1.7e-67 259.6 155 81.9
Hma1.2p1_1003F.1_g246730 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 1.4e-66 256.5 169 71.6
Dinv22369 Davidia involucrata HOM05D000461 ORTHO05D009042 1.8e-66 256.1 172 71.5
QL93p2023_0091 Quercus lobata HOM05D000461 ORTHO05D009042 7.0e-66 254.2 169 71.6
QL08p018706 Quercus lobata HOM05D000461 ORTHO05D009042 1.2e-65 253.4 169 71.0
Eucgr.F03352 Eucalyptus grandis HOM05D000461 ORTHO05D009042 2.0e-65 252.7 169 72.2
Nn1g03924 Nelumbo nucifera HOM05D000461 ORTHO05D009042 2.7e-65 252.3 170 73.5
CiPaw.11G175500 Carya illinoinensis HOM05D000461 ORTHO05D009042 6.5e-64 247.7 170 70.0
Prupe.4G189000 Prunus persica HOM05D000461 ORTHO05D009042 2.5e-63 245.7 169 71.0
MSTRG.15210 Avicennia marina HOM05D000461 ORTHO05D009042 4.2e-63 245.0 170 68.2
Cpa.g.sc80.106 Carica papaya HOM05D000461 ORTHO05D009042 4.2e-63 245.0 170 66.5
THA.LOC104799911 Tarenaya hassleriana HOM05D000461 ORTHO05D009042 7.2e-63 244.2 170 68.8
Manes.03G116000 Manihot esculenta HOM05D000461 ORTHO05D009042 1.2e-62 243.4 177 68.4
RcHm_v2.0_Chr5g0035191 Rosa chinensis HOM05D000461 ORTHO05D009042 1.2e-62 243.4 170 68.8
PGR031G2091 Punica granatum HOM05D000461 ORTHO05D009042 2.1e-62 242.7 172 68.6
Cc05_g12620 Coffea canephora HOM05D000461 ORTHO05D009042 4.7e-62 241.5 148 78.4
TWI39G0508 Tripterygium wilfordii HOM05D000461 ORTHO05D009042 8.0e-62 240.7 171 66.7
TAR626G1568 Trochodendron aralioides HOM05D000461 ORTHO05D009042 8.0e-62 240.7 159 73.0
Ah.04g164980 Amaranthus hybridus HOM05D000461 ORTHO05D009042 3.0e-61 238.8 171 66.7
Ca_29614_v3 Cicer arietinum L. HOM05D000461 ORTHO05D009042 4.0e-61 238.4 170 67.6
Medtr2g080290 Medicago truncatula HOM05D000461 ORTHO05D009042 1.2e-60 236.9 170 67.1
Ciclev10009303m.g Citrus clementina HOM05D000461 ORTHO05D009042 2.0e-60 236.1 170 65.3
COL.COLO4_09469 Corchorus olitorius HOM05D000461 ORTHO05D009768 2.6e-60 235.7 171 66.7
Duzib213G0849 Durio zibethinus HOM05D000461 ORTHO05D009042 2.6e-60 235.7 176 65.9
ClCG10G006570 Citrullus lanatus HOM05D000461 ORTHO05D009042 3.4e-60 235.3 171 67.8
GSVIVG01014422001 Vitis vinifera HOM05D000461 ORTHO05D009042 3.4e-60 235.3 148 71.6
Thecc.07G072900 Theobroma cacao HOM05D000461 ORTHO05D009042 4.4e-60 235.0 173 65.3
Lsat_1_v5_gn_7_106400 Lactuca sativa HOM05D000461 ORTHO05D009042 5.7e-60 234.6 148 72.3
Thhalv10026109m.g Eutrema salsugineum HOM05D000461 ORTHO05D009042 7.5e-60 234.2 152 73.7
BcaC06g32696 Brassica carinata HOM05D000461 ORTHO05D009042 9.8e-60 233.8 157 72.6
FAN11G0265 Fragaria x ananassa HOM05D000461 ORTHO05D009042 1.3e-59 233.4 174 66.1
Lalb_Chr25g0286691 Lupinus albus HOM05D000461 ORTHO05D009042 1.3e-59 233.4 167 67.7
AT4G27390 Arabidopsis thaliana HOM05D000461 ORTHO05D009042 1.7e-59 233.0 149 74.5
CANSAT11G1238 Cannabis sativa HOM05D000461 ORTHO05D009042 1.7e-59 233.0 172 64.5
Glyma.13G281300 Glycine max HOM05D000461 ORTHO05D009042 1.7e-59 233.0 170 67.1
BolC7t46022H Brassica oleracea HOM05D000461 ORTHO05D009042 3.7e-59 231.9 157 72.0
MD03G1219800 Malus domestica HOM05D000461 ORTHO05D009042 3.7e-59 231.9 147 72.1
A03p57230 Brassica napus HOM05D000461 ORTHO05D009042 6.3e-59 231.1 157 72.0
BraA03t14789Z Brassica rapa HOM05D000461 ORTHO05D009042 6.3e-59 231.1 157 72.0
Phvul.005G086500 Phaseolus vulgaris HOM05D000461 ORTHO05D009042 6.3e-59 231.1 170 65.3
FAN21G1502 Fragaria x ananassa HOM05D000461 ORTHO05D009042 1.1e-58 230.3 169 64.5
Sed0008890 Sechium edule HOM05D000461 ORTHO05D009042 1.1e-58 230.3 171 64.3
C07p55420 Brassica napus HOM05D000461 ORTHO05D009042 1.4e-58 229.9 157 71.3
MD11G1238100 Malus domestica HOM05D000461 ORTHO05D009042 1.8e-58 229.6 173 65.3
Glyma.12G220000 Glycine max HOM05D000461 ORTHO05D009042 3.1e-58 228.8 169 67.5
Psat5g246400 Pisum sativum HOM05D000461 ORTHO05D009042 3.1e-58 228.8 170 65.3
Migut.M00872 Erythranthe guttata HOM05D000461 ORTHO05D009042 5.4e-58 228.0 176 65.9
FAN16G2536 Fragaria x ananassa HOM05D000461 ORTHO05D009042 5.4e-58 228.0 171 63.2
CDE05G1014 Ceratophyllum demersum HOM05D000461 ORTHO05D009042 7.0e-58 227.6 156 70.5
Lalb_Chr01g0017011 Lupinus albus HOM05D000461 ORTHO05D009042 7.0e-58 227.6 171 64.3
Rhsim04G0018200 Rhododendron simsii HOM05D000461 ORTHO05D009042 7.0e-58 227.6 177 62.1
CARHR235060 Cardamine hirsuta HOM05D000461 ORTHO05D009042 1.2e-57 226.9 170 67.1
Potri.001G405800 Populus trichocarpa HOM05D000461 ORTHO05D009042 1.6e-57 226.5 174 64.4
CsaV3_3G006020 Cucumis sativus L. HOM05D000461 ORTHO05D009042 4.5e-57 224.9 174 64.4
Sp7g25320 Schrenkiella parvula HOM05D000461 ORTHO05D009042 5.9e-57 224.6 170 66.5
Carub.0007s1348 Capsella rubella HOM05D000461 ORTHO05D009042 7.7e-57 224.2 157 70.7
TPR.G32851 Trifolium pratense HOM05D000461 ORTHO05D009042 1.3e-56 223.4 170 63.5
Atru.chr2.2831 Acer truncatum HOM05D000461 ORTHO05D009042 1.7e-56 223.0 170 64.1
Gohir.D01G055600 Gossypium hirsutum HOM05D000461 ORTHO05D009042 2.3e-56 222.6 146 70.5
Aa31LG5G10130 Aethionema arabicum HOM05D000461 ORTHO05D009042 5.0e-56 221.5 141 74.5
Peaxi162Scf01216g00058 Petunia axillaris HOM05D000461 ORTHO05D009042 1.1e-55 220.3 153 73.9
Sabra16G0269500 Salix brachista HOM05D000461 ORTHO05D009042 1.1e-55 220.3 203 56.2
Aqoxy1G02771 Aquilegia oxysepala HOM05D000461 ORTHO05D009042 2.5e-55 219.2 156 69.2
AL7G25410 Arabidopsis lyrata HOM05D000461 ORTHO05D009042 3.3e-55 218.8 151 71.5
Sabra16G0267700 Salix brachista HOM05D000461 ORTHO05D009042 3.3e-55 218.8 203 56.2
Sc03g0009630 Simmondsia chinensis HOM05D000461 ORTHO05D009042 3.3e-55 218.8 167 61.7
Lj3g0027305 Lotus japonicus HOM05D000461 ORTHO05D009042 4.3e-55 218.4 148 68.2
Gohir.A01G068300 Gossypium hirsutum HOM05D000461 ORTHO05D009042 5.6e-55 218.0 170 62.9
Gorai.002G075700 Gossypium raimondii HOM05D000461 ORTHO05D009042 1.6e-54 216.5 149 69.1
SGA_v2.0_scaffold73G24312 Striga asiatica HOM05D000461 ORTHO05D009042 1.6e-54 216.5 171 64.3
PSO210G3087 Papaver somniferum HOM05D000461 ORTHO05D009042 2.1e-54 216.1 171 60.8
arahy.Tifrunner.gnm1.ann1.20QRXD Arachis hypogaea HOM05D000461 ORTHO05D009042 2.8e-54 215.7 145 68.3
Oeu005436.1 Olea europaea HOM05D000461 ORTHO05D009042 3.6e-54 215.3 125 76.8
Actinidia25643 Actinidia chinensis HOM05D000461 ORTHO05D009042 4.7e-54 214.9 178 62.9
arahy.Tifrunner.gnm1.ann1.IDBP1F Arachis hypogaea HOM05D000461 ORTHO05D009042 1.5e-52 209.9 147 66.7
DCAR_013076 Daucus carota HOM05D000461 ORTHO05D009768 2.2e-51 206.1 157 65.6
ECA236G1699 Erigeron canadensis HOM05D003383 ORTHO05D003890 8.3e-51 204.1 145 63.4
PSO832G2223 Papaver somniferum HOM05D000461 ORTHO05D009042 2.0e-49 199.5 172 58.1
Actinidia18752 Actinidia chinensis HOM05D000461 ORTHO05D009042 3.9e-48 195.3 178 57.9
EL10Ac4g08079 Beta vulgaris HOM05D000461 ORTHO05D009042 5.0e-48 194.9 229 45.4
HanXRQChr11g0330871 Helianthus annuus HOM05D000461 ORTHO05D009042 1.1e-47 193.7 143 62.9
PGSC0003DMG400019287 Solanum tuberosum HOM05D000461 ORTHO05D009042 4.0e-45 185.3 89 96.6
AUR62029322 Chenopodium quinoa HOM05D000461 ORTHO05D009042 8.9e-45 184.1 172 55.8
vmacro09553 Vaccinium macrocarpon HOM05D000461 ORTHO05D009042 2.2e-43 179.5 264 40.5
HPP92_001809 Vanilla planifolia HOM05D000461 ORTHO05D009042 1.4e-42 176.8 148 60.8
Zm00001eb352790 Zea mays HOM05D000461 ORTHO05D009042 2.0e-41 172.9 158 56.3
Actinidia35273 Actinidia chinensis HOM05D000461 ORTHO05D009042 2.7e-41 172.6 171 56.7
Os05g0502500 Oryza sativa ssp. japonica HOM05D000461 ORTHO05D009042 4.6e-41 171.8 143 62.2
FvH4_3g20860 Fragaria vesca HOM05D000461 ORTHO05D009042 1.0e-40 170.6 120 65.0
AUR62015609 Chenopodium quinoa HOM05D000461 ORTHO05D009042 3.9e-40 168.7 174 52.9
RcHm_v2.0_Chr5g0035211 Rosa chinensis HOM05D000461 ORTHO05D009042 4.3e-39 165.2 110 71.8
Mapoly0059s0039 Marchantia polymorpha HOM05D000461 ORTHO05D009042 1.1e-37 160.6 165 48.5
Haze_09518 Corylus avellana HOM05D000461 ORTHO05D009042 1.5e-36 156.8 199 47.2
Hund28424 Selenicereus undatus HOM05D000461 ORTHO05D009042 2.6e-36 156.0 194 45.9
Hund28429 Selenicereus undatus HOM05D000461 ORTHO05D009042 2.6e-36 156.0 194 45.9
MELO3C016549.2 Cucumis melo HOM05D000461 ORTHO05D009042 2.1e-33 146.4 99 67.7
Hma1.2p1_1003F.1_g246740 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 3.9e-32 142.1 82 75.6
SMO347G0332 Selaginella moellendorffii HOM05D000461 ORTHO05D009042 3.1e-29 132.5 158 42.4
Manes.15G162800 Manihot esculenta HOM05D000461 ORTHO05D009042 4.9e-27 125.2 88 70.5
CSS0035681 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 8.4e-27 124.4 87 70.1
Pp3c5_7600 Physcomitrium patens HOM05D000461 ORTHO05D009042 8.4e-27 124.4 171 43.9
CBR_g3118 Chara braunii HOM05D000461 ORTHO05D009042 4.1e-26 122.1 147 42.9
VMungo1080G0679 Vigna mungo HOM05D000461 ORTHO05D009042 2.1e-25 119.8 85 65.9
ATR0693G207 Amborella trichopoda HOM05D000461 ORTHO05D009042 8.9e-21 104.4 78 64.1
unitig_85.g27405 Utricularia gibba HOM05D000461 ORTHO05D009042 5.1e-16 88.6 146 39.7
FAN25G1192 Fragaria x ananassa HOM05D000461 ORTHO05D009042 2.4e-10 69.7 55 70.9
MBI18_g11113_MAGBIO Magnolia biondii HOM05D000461 ORTHO05D009042 4.6e-09 65.5 82 46.3
MELO3C030131.2 Cucumis melo HOM05D004229 ORTHO05D025211 5.1e-08 62.0 92 44.6
AagrBONN_evm.TU.Sc2ySwM_117.739 Anthoceros agrestis HOM05D000461 ORTHO05D009042 7.4e-07 58.2 79 40.5


User provided reference genes

Program Settings