Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g031690 Solanum pennellii HOM05D000461 ORTHO05D009768 7.6e-261 903.3 450 100.0
Solyc07g063510.3 Solanum lycopersicum HOM05D000461 ORTHO05D009768 3.5e-258 894.4 450 99.1
PGSC0003DMG400019289 Solanum tuberosum HOM05D000461 ORTHO05D009768 6.2e-255 883.6 450 97.8
Peaxi162Scf01111g00017 Petunia axillaris HOM05D000461 ORTHO05D009768 4.5e-245 850.9 450 92.7
Nitab4.5_0002565g0060 Nicotiana tabacum HOM05D000461 ORTHO05D009768 3.9e-241 837.8 447 93.1
CAN.G162.98 Capsicum annuum HOM05D000461 ORTHO05D009768 2.8e-239 831.6 481 87.5
Dinv08334 Davidia involucrata HOM05D000461 ORTHO05D009768 4.2e-219 764.6 446 84.1
RcHm_v2.0_Chr5g0035161 Rosa chinensis HOM05D000461 ORTHO05D009768 2.3e-217 758.8 455 82.0
Hma1.2p1_1003F.1_g246700 Hydrangea macrophylla HOM05D000461 ORTHO05D009768 8.8e-217 756.9 455 82.6
MD03G1220100 Malus domestica HOM05D000461 ORTHO05D009768 2.6e-216 755.4 453 82.1
Potri.011G127400 Populus trichocarpa HOM05D000461 ORTHO05D009768 3.3e-216 755.0 451 82.3
Cc05_g12580 Coffea canephora HOM05D000461 ORTHO05D009768 5.7e-216 754.2 423 86.8
Lj3g0022224 Lotus japonicus HOM05D000461 ORTHO05D009768 5.7e-216 754.2 449 82.9
Manes.03G115700 Manihot esculenta HOM05D000461 ORTHO05D009768 9.7e-216 753.4 450 83.1
Prupe.4G188800 Prunus persica HOM05D000461 ORTHO05D009768 3.7e-215 751.5 453 81.7
TAR626G0736 Trochodendron aralioides HOM05D000461 ORTHO05D009768 8.2e-215 750.4 449 82.9
Nitab4.5_0000297g0070 Nicotiana tabacum HOM05D000461 ORTHO05D009768 1.4e-214 749.6 447 85.9
QL93p2023_0115 Quercus lobata HOM05D000461 ORTHO05D009768 4.1e-214 748.0 466 80.3
arahy.Tifrunner.gnm1.ann1.QNW6LA Arachis hypogaea HOM05D000461 ORTHO05D009768 2.0e-213 745.7 472 79.0
Cfa020516 Carpinus fangiana HOM05D000461 ORTHO05D009768 2.0e-213 745.7 450 82.2
Gorai.002G075600 Gossypium raimondii HOM05D000461 ORTHO05D009768 4.5e-213 744.6 450 82.2
Gohir.D01G055500 Gossypium hirsutum HOM05D000461 ORTHO05D009768 7.7e-213 743.8 450 82.0
arahy.Tifrunner.gnm1.ann1.58XN2N Arachis hypogaea HOM05D000461 ORTHO05D009768 1.3e-212 743.0 472 78.8
Nn1g03933 Nelumbo nucifera HOM05D000461 ORTHO05D009768 1.9e-211 739.2 462 79.7
FvH4_3g20850 Fragaria vesca HOM05D000461 ORTHO05D009768 3.2e-211 738.4 453 81.0
Ca_17659_v3 Cicer arietinum L. HOM05D000461 ORTHO05D009768 9.4e-211 736.9 450 80.7
Lalb_Chr19g0134451 Lupinus albus HOM05D000461 ORTHO05D009768 9.4e-211 736.9 453 80.1
Migut.M00870 Erythranthe guttata HOM05D000461 ORTHO05D009768 2.7e-210 735.3 455 79.3
Sed0023337 Sechium edule HOM05D000461 ORTHO05D009768 6.1e-210 734.2 442 81.9
TWI39G0712 Tripterygium wilfordii HOM05D000461 ORTHO05D009768 6.1e-210 734.2 450 80.9
MSTRG.6849 Avicennia marina HOM05D000461 ORTHO05D009768 2.3e-209 732.3 443 81.0
Phvul.011G154500 Phaseolus vulgaris HOM05D000461 ORTHO05D009768 3.0e-209 731.9 410 86.6
Atru.chr2.2833 Acer truncatum HOM05D000461 ORTHO05D009768 4.0e-209 731.5 413 85.5
Medtr8g093250 Medicago truncatula HOM05D000461 ORTHO05D009768 8.8e-209 730.3 450 80.4
HanXRQChr11g0330921 Helianthus annuus HOM05D000461 ORTHO05D009768 1.2e-208 729.9 424 82.8
TPR.G37406 Trifolium pratense HOM05D000461 ORTHO05D009768 1.2e-208 729.9 447 81.0
VMungo1127G1042 Vigna mungo HOM05D000461 ORTHO05D009768 3.3e-208 728.4 429 83.2
COL.COLO4_09469 Corchorus olitorius HOM05D000461 ORTHO05D009768 7.5e-208 727.2 448 80.6
ECA236G2753 Erigeron canadensis HOM05D000461 ORTHO05D009768 2.8e-207 725.3 442 80.8
MBI02_g10553_MAGBIO Magnolia biondii HOM05D000461 ORTHO05D009768 2.8e-207 725.3 468 78.0
QL08p018730 Quercus lobata HOM05D000461 ORTHO05D009768 3.7e-207 724.9 515 72.6
Glyma.12G147900 Glycine max HOM05D000461 ORTHO05D009768 1.1e-206 723.4 451 80.0
SGA_v2.0_scaffold34G13718 Striga asiatica HOM05D000461 ORTHO05D009768 4.1e-206 721.5 457 77.9
Rhsim04G0018400 Rhododendron simsii HOM05D000461 ORTHO05D009768 5.3e-206 721.1 476 76.5
Lsat_1_v5_gn_7_106360 Lactuca sativa HOM05D000461 ORTHO05D009768 7.0e-206 720.7 450 79.8
CsaV3_3G044400 Cucumis sativus L. HOM05D000461 ORTHO05D009768 9.1e-206 720.3 446 79.8
Cpa.g.sc80.105 Carica papaya HOM05D000461 ORTHO05D009768 1.6e-205 719.5 405 86.2
Eucgr.H00422 Eucalyptus grandis HOM05D000461 ORTHO05D009768 1.7e-204 716.1 446 80.7
Ah.04g164990 Amaranthus hybridus HOM05D000461 ORTHO05D009768 3.6e-202 708.4 450 78.0
vmacro09551 Vaccinium macrocarpon HOM05D000461 ORTHO05D009768 1.0e-201 706.8 504 72.2
Sc03g0009640 Simmondsia chinensis HOM05D000461 ORTHO05D009768 8.8e-201 703.7 441 78.0
CANSAT11G0348 Cannabis sativa HOM05D000461 ORTHO05D009768 2.0e-200 702.6 478 75.3
Haze_09517 Corylus avellana HOM05D000461 ORTHO05D009768 1.3e-196 689.9 450 77.6
HPP92_016586 Vanilla planifolia HOM05D000461 ORTHO05D009768 3.8e-196 688.3 451 75.2
Duzib213G0388 Durio zibethinus HOM05D000461 ORTHO05D009768 1.6e-194 682.9 430 79.1
SalBow8G3533 Salvia bowleyana HOM05D000461 ORTHO05D009768 2.3e-193 679.1 460 74.3
Thecc.07G073000 Theobroma cacao HOM05D000461 ORTHO05D009768 4.0e-193 678.3 449 76.6
AUR62015610 Chenopodium quinoa HOM05D000461 ORTHO05D009768 4.4e-192 674.9 494 69.8
unitig_747.g21565 Utricularia gibba HOM05D000461 ORTHO05D009768 1.0e-188 663.7 446 74.9
DCAR_013076 Daucus carota HOM05D000461 ORTHO05D009768 1.7e-188 662.9 434 78.1
ClCG11G018420 Citrullus lanatus HOM05D000461 ORTHO05D009768 2.9e-188 662.1 444 75.5
CiPaw.11G175300 Carya illinoinensis HOM05D000461 ORTHO05D009768 1.5e-187 659.8 368 86.1
Lj1C852T3 Lonicera japonica HOM05D000461 ORTHO05D009768 1.5e-187 659.8 442 76.5
EL10Ac4g08080 Beta vulgaris HOM05D000461 ORTHO05D009768 2.3e-185 652.5 432 75.7
SEGI_18811 Sequoiadendron giganteum HOM05D000461 ORTHO05D009768 2.0e-184 649.4 408 75.2
Zm00001eb069190 Zea mays HOM05D000461 ORTHO05D009768 1.1e-182 643.7 411 75.4
AUR62029323 Chenopodium quinoa HOM05D000461 ORTHO05D009768 4.1e-182 641.7 450 71.6
Mapoly0032s0012 Marchantia polymorpha HOM05D000461 ORTHO05D009768 6.2e-178 627.9 433 68.8
Hund27427 Selenicereus undatus HOM05D000461 ORTHO05D009768 6.8e-177 624.4 442 71.9
Pp3c15_6180 Physcomitrium patens HOM05D000461 ORTHO05D009768 7.5e-176 620.9 426 70.0
MELO3C018201.2 Cucumis melo HOM05D000461 ORTHO05D009768 4.9e-175 618.2 444 71.8
Oeu019359.1 Olea europaea HOM05D000461 ORTHO05D009768 4.0e-169 598.6 358 84.1
AagrBONN_evm.TU.Sc2ySwM_344.1693 Anthoceros agrestis HOM05D000461 ORTHO05D009768 8.3e-167 590.9 437 65.4
SMO137G0173 Selaginella moellendorffii HOM05D000461 ORTHO05D009768 1.0e-164 583.9 408 68.9
Psat7g047120 Pisum sativum HOM05D000461 ORTHO05D009768 2.4e-161 572.8 363 78.8
CBR_g31136 Chara braunii HOM05D000461 ORTHO05D009768 1.6e-157 560.1 411 65.2
CDE12G0333 Ceratophyllum demersum HOM05D000461 ORTHO05D009768 4.7e-154 548.5 362 73.8
Cre06.g301650 Chlamydomonas reinhardtii HOM05D000461 ORTHO05D009768 2.4e-129 466.5 398 58.0
PRCOL_00003908 Prasinoderma coloniale HOM05D000461 ORTHO05D009768 8.2e-122 441.4 434 53.0
Glyma.06G253602 Glycine max HOM05D000461 ORTHO05D009768 2.6e-107 393.3 243 79.0
GSVIVG01014420001 Vitis vinifera HOM05D000461 ORTHO05D009768 1.1e-105 387.9 228 82.0
Gohir.A01G068201 Gossypium hirsutum HOM05D000461 ORTHO05D009768 4.8e-90 335.9 233 75.5
Zm00001eb291490 Zea mays HOM05D000461 ORTHO05D009768 9.5e-78 295.0 183 78.1
Zm00001eb057620 Zea mays HOM05D000461 ORTHO05D009768 2.8e-77 293.5 183 77.6
Zm00001eb222780 Zea mays HOM05D000461 ORTHO05D009768 2.8e-77 293.5 183 77.6
Zm00001eb308580 Zea mays HOM05D000461 ORTHO05D009768 2.8e-77 293.5 183 77.6
ATR0274G001 Amborella trichopoda HOM05D000461 ORTHO05D009768 3.2e-65 253.4 146 82.9
Gohir.A01G068251 Gossypium hirsutum HOM05D000461 ORTHO05D009768 3.0e-63 246.9 140 85.7
SEGI_34047 Sequoiadendron giganteum HOM05D000461 ORTHO05D009768 9.9e-51 205.3 177 59.3
Os04g0636300 Oryza sativa ssp. japonica HOM05D000461 ORTHO05D009768 5.4e-49 199.5 140 70.7
GSVIVG01014419001 Vitis vinifera HOM05D000461 ORTHO05D009768 9.0e-36 155.6 131 66.4
arahy.Tifrunner.gnm1.ann1.AV15VC Arachis hypogaea HOM05D000296 ORTHO05D000175 2.3e-15 87.8 44 93.2
Lalb_Chr19g0134431 Lupinus albus HOM05D000461 ORTHO05D038317 2.9e-10 70.9 87 49.4
ATR0693G093 Amborella trichopoda HOM05D000461 ORTHO05D038317 2.7e-08 64.3 77 51.9
SEGI_16587 Sequoiadendron giganteum HOM05D000415 ORTHO05D385778 3.9e-07 60.5 47 55.3


User provided reference genes

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