Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g031330 Solanum pennellii HOM05D006497 ORTHO05D008263 1.7e-73 279.3 141 100.0
Solyc07g063140.1 Solanum lycopersicum HOM05D006497 ORTHO05D008263 2.1e-71 272.3 141 96.5
PGSC0003DMG400012416 Solanum tuberosum HOM05D006497 ORTHO05D008263 4.6e-71 271.2 141 97.2
Nitab4.5_0000318g0100 Nicotiana tabacum HOM05D006497 ORTHO05D008263 3.9e-54 214.9 142 79.6
Nitab4.5_0002021g0040 Nicotiana tabacum HOM05D006497 ORTHO05D008263 4.3e-53 211.5 142 77.5
Peaxi162Scf00840g00427 Petunia axillaris HOM05D006497 ORTHO05D008263 7.4e-53 210.7 145 77.2
CAN.G162.59 Capsicum annuum HOM05D006497 ORTHO05D008263 9.0e-51 203.8 141 75.2
Hma1.2p1_0049F.1_g028230 Hydrangea macrophylla HOM05D006497 ORTHO05D008263 9.0e-43 177.2 120 75.8
Actinidia18207 Actinidia chinensis HOM05D006497 ORTHO05D008263 2.6e-42 175.6 141 65.2
Migut.E01547 Erythranthe guttata HOM05D006497 ORTHO05D008263 1.3e-41 173.3 122 69.7
CANSAT54G2618 Cannabis sativa HOM05D006497 ORTHO05D008263 1.7e-41 172.9 125 70.4
PSO210G2909 Papaver somniferum HOM05D006497 ORTHO05D008263 2.2e-41 172.6 122 71.3
Potri.018G058200 Populus trichocarpa HOM05D006497 ORTHO05D008263 2.2e-41 172.6 145 63.4
GSVIVG01035327001 Vitis vinifera HOM05D006497 ORTHO05D008263 2.9e-41 172.2 143 67.8
Cpa.g.sc27.217 Carica papaya HOM05D006497 ORTHO05D008263 3.8e-41 171.8 104 76.9
COL.COLO4_21011 Corchorus olitorius HOM05D006497 ORTHO05D008263 3.8e-41 171.8 124 70.2
Nn8g39006 Nelumbo nucifera HOM05D006497 ORTHO05D008263 6.5e-41 171.0 105 81.9
SalBow1G7152 Salvia bowleyana HOM05D006497 ORTHO05D008263 1.1e-40 170.2 122 72.1
CSS0028638 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 2.5e-40 169.1 145 62.8
QL12p040844 Quercus lobata HOM05D006497 ORTHO05D008263 3.2e-40 168.7 133 66.9
Rhsim05G0006000 Rhododendron simsii HOM05D006497 ORTHO05D008263 3.2e-40 168.7 133 66.2
Atru.chr7.2042 Acer truncatum HOM05D006497 ORTHO05D008263 5.5e-40 167.9 124 68.5
Duzib168G0301 Durio zibethinus HOM05D006497 ORTHO05D008263 5.5e-40 167.9 106 77.4
PSO210G1815 Papaver somniferum HOM05D006497 ORTHO05D008263 5.5e-40 167.9 104 77.9
CSS0007660 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 1.6e-39 166.4 140 62.1
CSS0049899 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 1.6e-39 166.4 140 62.1
Eucgr.C00622 Eucalyptus grandis HOM05D006497 ORTHO05D008263 2.1e-39 166.0 113 71.7
Nn8g40951 Nelumbo nucifera HOM05D006497 ORTHO05D008263 2.1e-39 166.0 106 78.3
TAR636G3582 Trochodendron aralioides HOM05D006497 ORTHO05D008263 2.7e-39 165.6 98 79.6
AUR62040211 Chenopodium quinoa HOM05D006497 ORTHO05D008263 3.5e-39 165.2 104 70.2
Thecc.09G049300 Theobroma cacao HOM05D006497 ORTHO05D008263 3.5e-39 165.2 113 71.7
Sabra18G0054600 Salix brachista HOM05D006497 ORTHO05D008263 4.6e-39 164.9 145 60.0
CiPaw.08G027800 Carya illinoinensis HOM05D006497 ORTHO05D008263 6.0e-39 164.5 98 82.7
Gohir.A07G022176 Gossypium hirsutum HOM05D006497 ORTHO05D008263 1.0e-38 163.7 106 74.5
ClCG11G014990 Citrullus lanatus HOM05D006497 ORTHO05D008263 1.8e-38 162.9 98 78.6
Migut.A00169 Erythranthe guttata HOM05D006497 ORTHO05D008263 2.3e-38 162.5 141 58.2
Gorai.001G024500 Gossypium raimondii HOM05D006497 ORTHO05D008263 3.0e-38 162.2 106 73.6
FvH4_2g35131 Fragaria vesca HOM05D006497 ORTHO05D008263 3.9e-38 161.8 102 74.5
FAN15G0473 Fragaria x ananassa HOM05D006497 ORTHO05D008263 3.9e-38 161.8 99 76.8
RcHm_v2.0_Chr6g0306821 Rosa chinensis HOM05D006497 ORTHO05D008263 3.9e-38 161.8 124 65.3
AUR62009213 Chenopodium quinoa HOM05D006497 ORTHO05D008263 5.1e-38 161.4 130 59.2
Cc08_g10030 Coffea canephora HOM05D006497 ORTHO05D008263 6.7e-38 161.0 102 72.5
EL10Ac2g03958 Beta vulgaris HOM05D006497 ORTHO05D008263 8.7e-38 160.6 129 59.7
Sed0009640 Sechium edule HOM05D006497 ORTHO05D008263 8.7e-38 160.6 144 56.9
Ah.10g034670 Amaranthus hybridus HOM05D006497 ORTHO05D008263 1.5e-37 159.8 130 60.8
Aqoxy6G00985 Aquilegia oxysepala HOM05D006497 ORTHO05D008263 1.5e-37 159.8 106 74.5
MSTRG.11681 Avicennia marina HOM05D006497 ORTHO05D008263 1.5e-37 159.8 124 71.0
Prupe.1G443400 Prunus persica HOM05D006497 ORTHO05D008263 1.5e-37 159.8 104 74.0
MELO3C003479.2 Cucumis melo HOM05D006497 ORTHO05D008263 1.9e-37 159.5 149 59.1
MD08G1108800 Malus domestica HOM05D006497 ORTHO05D008263 3.3e-37 158.7 103 73.8
PGR031G1870 Punica granatum HOM05D006497 ORTHO05D008263 4.3e-37 158.3 104 73.1
CsaV3_3G048400 Cucumis sativus L. HOM05D006497 ORTHO05D008263 9.6e-37 157.1 99 74.7
Haze_01965 Corylus avellana HOM05D006497 ORTHO05D008263 1.3e-36 156.8 104 75.0
THA.LOC104803742 Tarenaya hassleriana HOM05D006497 ORTHO05D008263 1.6e-36 156.4 99 74.7
Cfa005390 Carpinus fangiana HOM05D006497 ORTHO05D008263 2.1e-36 156.0 104 75.0
Ciclev10009788m.g Citrus clementina HOM05D006497 ORTHO05D008263 2.1e-36 156.0 102 72.5
Lsat_1_v5_gn_3_27161 Lactuca sativa HOM05D006497 ORTHO05D008263 4.8e-36 154.8 149 59.7
Sed0025405 Sechium edule HOM05D006497 ORTHO05D008263 4.8e-36 154.8 141 59.6
Sc09g0009540 Simmondsia chinensis HOM05D006497 ORTHO05D008263 1.4e-35 153.3 99 71.7
DCAR_003057 Daucus carota HOM05D006497 ORTHO05D008263 1.8e-35 152.9 98 73.5
ECA246G5018 Erigeron canadensis HOM05D006497 ORTHO05D008263 1.8e-35 152.9 98 76.5
CDE10G0177 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 1.2e-34 150.2 105 69.5
arahy.Tifrunner.gnm1.ann1.0Y6FKJ Arachis hypogaea HOM05D006497 ORTHO05D008263 3.4e-34 148.7 108 68.5
CDE10G1018 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 4.5e-34 148.3 105 69.5
Os03g0651000 Oryza sativa ssp. japonica HOM05D006497 ORTHO05D008263 5.9e-34 147.9 100 71.0
Sp7g30690 Schrenkiella parvula HOM05D006497 ORTHO05D008263 7.6e-34 147.5 120 61.7
arahy.Tifrunner.gnm1.ann1.E0CW41 Arachis hypogaea HOM05D006497 ORTHO05D008263 1.3e-33 146.7 121 62.0
Thhalv10026449m.g Eutrema salsugineum HOM05D006497 ORTHO05D008263 2.2e-33 146.0 143 54.5
Oeu011793.1 Olea europaea HOM05D006497 ORTHO05D008263 3.8e-33 145.2 146 56.2
BcaB03g12770 Brassica carinata HOM05D006497 ORTHO05D008263 5.0e-33 144.8 98 70.4
Hund19485 Selenicereus undatus HOM05D006497 ORTHO05D008263 5.0e-33 144.8 169 46.7
unitig_32.g11478 Utricularia gibba HOM05D006497 ORTHO05D008263 5.0e-33 144.8 105 69.5
AT4G32915 Arabidopsis thaliana HOM05D006497 ORTHO05D008263 8.5e-33 144.1 139 54.0
Glyma.20G177400 Glycine max HOM05D006497 ORTHO05D008263 8.5e-33 144.1 122 59.8
A08p17840 Brassica napus HOM05D006497 ORTHO05D008263 1.4e-32 143.3 98 70.4
C03p86910 Brassica napus HOM05D006497 ORTHO05D008263 1.4e-32 143.3 98 70.4
BolC3t20984H Brassica oleracea HOM05D006497 ORTHO05D008263 1.4e-32 143.3 98 70.4
CARHR240920 Cardamine hirsuta HOM05D006497 ORTHO05D008263 1.4e-32 143.3 135 54.1
BcaNung02143 Brassica carinata HOM05D006497 ORTHO05D008263 3.2e-32 142.1 128 55.5
BraA08t33734Z Brassica rapa HOM05D006497 ORTHO05D008263 5.5e-32 141.4 98 69.4
Carub.0007s0757 Capsella rubella HOM05D006497 ORTHO05D008263 5.5e-32 141.4 107 65.4
Glyma.10G214200 Glycine max HOM05D006497 ORTHO05D008263 7.2e-32 141.0 110 63.6
Zm00001eb218450 Zea mays HOM05D006497 ORTHO05D008263 7.2e-32 141.0 134 56.7
ATR0749G075 Amborella trichopoda HOM05D006497 ORTHO05D008263 9.3e-32 140.6 121 61.2
AL7G18780 Arabidopsis lyrata HOM05D006497 ORTHO05D008263 9.3e-32 140.6 99 66.7
Ca_10596_v3 Cicer arietinum L. HOM05D006497 ORTHO05D008263 1.6e-31 139.8 104 64.4
VMungo0720G1877 Vigna mungo HOM05D006497 ORTHO05D008263 1.6e-31 139.8 104 63.5
C07p59400 Brassica napus HOM05D006497 ORTHO05D008263 2.1e-31 139.4 128 55.5
Medtr1g095920 Medicago truncatula HOM05D006497 ORTHO05D008263 2.1e-31 139.4 127 56.7
Psat6g186080 Pisum sativum HOM05D006497 ORTHO05D008263 2.1e-31 139.4 119 59.7
ATR0304G027 Amborella trichopoda HOM05D006497 ORTHO05D008263 4.6e-31 138.3 132 58.3
BolC7t46384H Brassica oleracea HOM05D006497 ORTHO05D008263 4.6e-31 138.3 128 55.5
Phvul.007G091500 Phaseolus vulgaris HOM05D006497 ORTHO05D008263 4.6e-31 138.3 104 62.5
TPR.G11934 Trifolium pratense HOM05D006497 ORTHO05D008263 1.0e-30 137.1 98 68.4
A03p61670 Brassica napus HOM05D006497 ORTHO05D008263 3.9e-30 135.2 93 67.7
BraA03t15206Z Brassica rapa HOM05D006497 ORTHO05D008263 3.9e-30 135.2 93 67.7
TPR.G1790 Trifolium pratense HOM05D006497 ORTHO05D008263 8.7e-30 134.0 97 67.0
HPP92_013944 Vanilla planifolia HOM05D006497 ORTHO05D008263 1.1e-29 133.7 101 58.4
Lj5g0021165 Lotus japonicus HOM05D006497 ORTHO05D008263 2.5e-29 132.5 145 49.0
SGA_v2.0_scaffold163G38048 Striga asiatica HOM05D006497 ORTHO05D008263 7.4e-29 131.0 196 39.8
Lalb_Chr06g0162131 Lupinus albus HOM05D006497 ORTHO05D008263 1.3e-28 130.2 93 63.4
Aa31LG2G18050 Aethionema arabicum HOM05D006497 ORTHO05D008263 2.2e-28 129.4 92 67.4
FAN27G1249 Fragaria x ananassa HOM05D006497 ORTHO05D008263 3.4e-26 122.1 115 58.3
SEGI_35319 Sequoiadendron giganteum HOM05D006497 ORTHO05D008263 1.0e-25 120.6 103 57.3
TWI32G0413 Tripterygium wilfordii HOM05D006497 ORTHO05D008263 5.0e-25 118.2 77 71.4
HanXRQChr17g0538891 Helianthus annuus HOM05D006497 ORTHO05D008263 8.5e-25 117.5 81 74.1
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea HOM05D006497 ORTHO05D009640 1.9e-24 116.3 200 39.0
Dinv27945 Davidia involucrata HOM05D006497 ORTHO05D008263 1.1e-21 107.1 55 92.7
SGA_v2.0_scaffold169G38673 Striga asiatica HOM05D006497 ORTHO05D008263 1.1e-21 107.1 98 57.1
vmacro08276 Vaccinium macrocarpon HOM05D006497 ORTHO05D008263 4.4e-21 105.1 61 78.7
MBI13_g05466_MAGBIO Magnolia biondii HOM05D006497 ORTHO05D008263 2.2e-20 102.8 64 78.1
Manes.03G057500 Manihot esculenta HOM05D006497 ORTHO05D008263 6.3e-20 101.3 107 57.0
Mapoly0154s0030 Marchantia polymorpha HOM05D006497 ORTHO05D008263 1.4e-19 100.1 96 50.0
CBR_g31997 Chara braunii HOM05D006497 ORTHO05D008263 6.9e-19 97.8 102 46.1
Cre08.g364650 Chlamydomonas reinhardtii HOM05D001184 ORTHO05D007940 2.7e-15 85.9 103 41.7
Pp3c2_33430 Physcomitrium patens HOM05D006497 ORTHO05D008263 2.7e-15 85.9 99 37.4
Gohir.D07G023800 Gossypium hirsutum HOM05D006497 ORTHO05D008263 1.4e-14 83.6 57 70.2
SMO146G0150 Selaginella moellendorffii HOM05D006497 ORTHO05D008263 1.4e-14 83.6 96 42.7
MCO07G547 Micromonas commoda HOM05D001184 ORTHO05D007940 1.2e-10 70.5 95 41.1
Rhsim07G0144900 Rhododendron simsii HOM05D006497 ORTHO05D008263 6.5e-09 64.7 42 66.7
PRCOL_00005999 Prasinoderma coloniale HOM05D006497 ORTHO05D008263 5.5e-08 61.6 96 34.4
MBI13_g38674_MAGBIO Magnolia biondii HOM05D006497 ORTHO05D008263 1.2e-07 60.5 126 36.5


User provided reference genes

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