Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g031150 Solanum pennellii HOM05D007784 ORTHO05D008654 1.0e-93 347.1 215 100.0
Solyc07g062960.1 Solanum lycopersicum HOM05D007784 ORTHO05D008654 1.1e-89 333.6 215 97.2
PGSC0003DMG400012442 Solanum tuberosum HOM05D007784 ORTHO05D008654 2.7e-83 312.4 215 92.6
CAN.G162.41 Capsicum annuum HOM05D007784 ORTHO05D008654 3.8e-61 238.8 226 61.9
Peaxi162Scf00069g01710 Petunia axillaris HOM05D007784 ORTHO05D008654 1.5e-41 173.7 183 56.3
Cfa020564 Carpinus fangiana HOM05D007784 ORTHO05D008654 2.8e-19 99.8 214 49.5
CiPaw.11G171500 Carya illinoinensis HOM05D007784 ORTHO05D008654 3.4e-17 92.8 222 43.7
CiPaw.12G119800 Carya illinoinensis HOM05D007784 ORTHO05D008654 4.5e-17 92.4 214 47.2
QL08p022546 Quercus lobata HOM05D007784 ORTHO05D008654 4.5e-17 92.4 214 42.5
CSS0002410 Camellia sinensis var. sinensis HOM05D007784 ORTHO05D008654 9.9e-17 91.3 210 43.8
MSTRG.15239 Avicennia marina HOM05D007784 ORTHO05D008654 1.7e-16 90.5 203 42.9
Hma1.2p1_0387F.1_g141980 Hydrangea macrophylla HOM05D007784 ORTHO05D008654 2.4e-15 86.7 207 37.7
Psat4g131560 Pisum sativum HOM05D007784 ORTHO05D008654 9.3e-15 84.7 212 33.5
Ciclev10010505m.g Citrus clementina HOM05D007784 ORTHO05D008654 1.2e-14 84.3 220 45.0
Migut.M00785 Erythranthe guttata HOM05D007784 ORTHO05D008654 4.6e-14 82.4 213 41.3
Cc05_g11830 Coffea canephora HOM05D007784 ORTHO05D008654 3.9e-13 79.3 219 39.3
Gohir.D01G048300 Gossypium hirsutum HOM05D007784 ORTHO05D008654 3.9e-13 79.3 222 41.0
Gorai.002G068100 Gossypium raimondii HOM05D007784 ORTHO05D008654 3.9e-13 79.3 222 41.0
MD03G1230800 Malus domestica HOM05D007784 ORTHO05D008654 6.7e-13 78.6 216 44.9
Gohir.A01G061700 Gossypium hirsutum HOM05D007784 ORTHO05D008654 1.9e-12 77.0 221 39.8
Cpa.g.c36086 Carica papaya HOM05D007784 ORTHO05D008654 2.5e-12 76.6 224 43.8
Prupe.4G177000 Prunus persica HOM05D007784 ORTHO05D008654 4.3e-12 75.9 220 46.8
Aqoxy1G02344 Aquilegia oxysepala HOM05D007784 ORTHO05D008654 1.3e-11 74.3 212 40.1
Aqoxy5G00008 Aquilegia oxysepala HOM05D007784 ORTHO05D008654 1.6e-11 73.9 212 40.1
COL.COLO4_36703 Corchorus olitorius HOM05D007784 ORTHO05D008654 1.6e-11 73.9 219 40.2
PGR031G1623 Punica granatum HOM05D007784 ORTHO05D008654 3.6e-11 72.8 219 40.2
Actinidia09697 Actinidia chinensis HOM05D007784 ORTHO05D008654 4.8e-11 72.4 208 42.8
ClCG11G017920 Citrullus lanatus HOM05D007784 ORTHO05D008654 4.8e-11 72.4 224 29.9
Nn1g04167 Nelumbo nucifera HOM05D007784 ORTHO05D008654 1.4e-10 70.9 199 43.7
Duzib268G0159 Durio zibethinus HOM05D007784 ORTHO05D008654 1.8e-10 70.5 217 39.6
Gohir.D13G151926 Gossypium hirsutum HOM05D007784 ORTHO05D008654 1.8e-10 70.5 223 38.6
FvH4_3g19630 Fragaria vesca HOM05D007784 ORTHO05D008654 4.0e-10 69.3 219 43.4
FAN11G2265 Fragaria x ananassa HOM05D007784 ORTHO05D008654 4.0e-10 69.3 219 43.4
TAR627G0175 Trochodendron aralioides HOM05D007784 ORTHO05D008654 4.0e-10 69.3 197 42.6
Oeu051079.1 Olea europaea HOM05D007784 ORTHO05D008654 5.3e-10 68.9 205 40.0
Sabra16G0260800 Salix brachista HOM05D007784 ORTHO05D008654 5.3e-10 68.9 219 35.2
Haze_09448 Corylus avellana HOM05D007784 ORTHO05D008654 9.0e-10 68.2 105 65.7
Manes.15G088900 Manihot esculenta HOM05D007784 ORTHO05D008654 9.0e-10 68.2 217 42.4
Potri.011G116600 Populus trichocarpa HOM05D007784 ORTHO05D008654 9.0e-10 68.2 218 36.2
Thecc.07G095100 Theobroma cacao HOM05D007784 ORTHO05D008654 1.2e-09 67.8 217 39.6
Dinv14932 Davidia involucrata HOM05D007784 ORTHO05D008654 2.0e-09 67.0 54 61.1
Lalb_Chr03g0030731 Lupinus albus HOM05D007784 ORTHO05D008654 2.0e-09 67.0 215 38.1
DCAR_017127 Daucus carota HOM05D007784 ORTHO05D008654 2.6e-09 66.6 206 38.3
Lalb_Chr01g0006591 Lupinus albus HOM05D007784 ORTHO05D008654 2.6e-09 66.6 217 38.2
Duzib213G0720 Durio zibethinus HOM05D007784 ORTHO05D008654 3.4e-09 66.2 218 39.4
FAN21G3158 Fragaria x ananassa HOM05D007784 ORTHO05D008654 3.4e-09 66.2 221 42.5
PGR083G0236 Punica granatum HOM05D007784 ORTHO05D008654 7.6e-09 65.1 214 29.4
MELO3C025600.2 Cucumis melo HOM05D007784 ORTHO05D008654 1.3e-08 64.3 221 31.7
Rhsim06G0201400 Rhododendron simsii HOM05D007784 ORTHO05D008654 1.7e-08 63.9 223 40.8
Nn1g06458 Nelumbo nucifera HOM05D007784 ORTHO05D008654 2.2e-08 63.5 195 38.5
Sabra11G0102100 Salix brachista HOM05D007784 ORTHO05D008654 4.9e-08 62.4 221 37.1
TAR627G0444 Trochodendron aralioides HOM05D007784 ORTHO05D008654 6.4e-08 62.0 197 38.6
CARHR090230 Cardamine hirsuta HOM05D009851 ORTHO05D008654 1.4e-07 60.8 219 32.0
Potri.001G398000 Populus trichocarpa HOM05D007784 ORTHO05D008654 1.4e-07 60.8 218 36.7
Phvul.011G165000 Phaseolus vulgaris HOM05D007784 ORTHO05D008654 1.9e-07 60.5 212 34.9
FAN25G3654 Fragaria x ananassa HOM05D007784 ORTHO05D008654 2.4e-07 60.1 219 42.0
C05p51990 Brassica napus HOM05D009851 ORTHO05D008654 4.2e-07 59.3 213 37.1
PSO541G4378 Papaver somniferum HOM05D007784 ORTHO05D008654 5.5e-07 58.9 226 40.3
BcaB06g29548 Brassica carinata HOM05D009851 ORTHO05D008654 7.1e-07 58.5 216 36.6
AL3G27640 Arabidopsis lyrata HOM05D009851 ORTHO05D008654 9.3e-07 58.2 231 32.0
RcHm_v2.0_Chr5g0032821 Rosa chinensis HOM05D007784 ORTHO05D008654 1.2e-06 57.8 221 38.0
VMungo1127G1039 Vigna mungo HOM05D007784 ORTHO05D008654 1.2e-06 57.8 225 32.0
BcaB06g29549 Brassica carinata HOM05D009851 ORTHO05D008654 2.1e-06 57.0 215 37.2
Manes.03G106700 Manihot esculenta HOM05D007784 ORTHO05D008654 2.1e-06 57.0 225 39.6
Atru.chr2.2433 Acer truncatum HOM05D007784 ORTHO05D008654 2.7e-06 56.6 234 42.7
BcaB03g11679 Brassica carinata HOM05D009851 ORTHO05D008654 3.5e-06 56.2 55 60.0
BolC5t33884H Brassica oleracea HOM05D009851 ORTHO05D008654 3.5e-06 56.2 212 36.3
Sp3g13450 Schrenkiella parvula HOM05D009851 ORTHO05D008654 3.5e-06 56.2 217 39.2
CANSAT56G4083 Cannabis sativa HOM05D007784 ORTHO05D008654 6.0e-06 55.5 249 36.1
Medtr0598s0020 Medicago truncatula HOM05D007784 ORTHO05D008654 7.9e-06 55.1 135 46.7


User provided reference genes

Program Settings