Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g030160 Solanum pennellii HOM05D011950 ORTHO05D009674 1.0e-102 376.7 185 100.0
Solyc07g061890.1 Solanum lycopersicum HOM05D011950 ORTHO05D009674 8.9e-91 337.0 185 89.7
PGSC0003DMG400007050 Solanum tuberosum HOM05D011950 ORTHO05D009674 5.1e-78 294.7 183 80.3
Nitab4.5_0004038g0010 Nicotiana tabacum HOM05D011950 ORTHO05D009674 5.3e-67 258.1 189 71.4
Nitab4.5_0020402g0010 Nicotiana tabacum HOM05D011950 ORTHO05D009674 3.2e-64 248.8 189 70.9
Peaxi162Scf00111g01112 Petunia axillaris HOM05D011950 ORTHO05D009674 6.3e-36 154.8 153 60.1
Peaxi162Scf00000g00523 Petunia axillaris HOM05D011950 ORTHO05D009674 8.2e-28 127.9 186 44.6
Nitab4.5_0000639g0100 Nicotiana tabacum HOM05D011950 ORTHO05D009674 5.9e-26 121.7 189 44.4
Nitab4.5_0007142g0040 Nicotiana tabacum HOM05D011950 ORTHO05D009674 5.5e-24 115.2 189 41.8
PGSC0003DMG400008560 Solanum tuberosum HOM05D011950 ORTHO05D009674 2.7e-23 112.8 184 43.5
Sopen12g006760 Solanum pennellii HOM05D011950 ORTHO05D009674 2.2e-20 103.2 184 41.8
Hma1.2p1_0280F.1_g112890 Hydrangea macrophylla HOM05D008142 ORTHO05D009674 2.4e-19 99.8 184 40.2
Actinidia35170 Actinidia chinensis HOM05D008142 ORTHO05D009674 6.1e-15 85.1 181 35.9
Oeu001311.1 Olea europaea HOM05D008142 ORTHO05D009674 1.4e-14 84.0 188 33.5
PGSC0003DMG401021252 Solanum tuberosum HOM05D011950 ORTHO05D009674 2.3e-14 83.2 183 35.5
Dinv26679 Davidia involucrata HOM05D008142 ORTHO05D009674 2.0e-13 80.1 140 38.6
CSS0003990 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 4.4e-13 79.0 190 35.3
Oeu020029.1 Olea europaea HOM05D008142 ORTHO05D009674 4.4e-13 79.0 189 32.8
Actinidia18850 Actinidia chinensis HOM05D008142 ORTHO05D009674 1.3e-12 77.4 177 34.5
Dinv13326 Davidia involucrata HOM05D000230 ORTHO05D000176 1.7e-12 77.0 178 36.0
Nn3g20734 Nelumbo nucifera HOM05D008142 ORTHO05D009674 1.7e-12 77.0 189 32.8
QL04p069987 Quercus lobata HOM05D008142 ORTHO05D009674 1.7e-12 77.0 169 34.3
CSS0032813 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 2.2e-12 76.6 186 33.3
MSTRG.15018 Avicennia marina HOM05D008142 ORTHO05D009674 1.4e-11 73.9 190 34.2
Prupe.4G151500 Prunus persica HOM05D015893 ORTHO05D019166 1.4e-11 73.9 190 30.0
CSS0017983 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 3.1e-11 72.8 190 35.8
Lsat_1_v5_gn_7_100541 Lactuca sativa HOM05D008142 ORTHO05D009674 4.1e-11 72.4 184 31.0
RhsimUnG0205200 Rhododendron simsii HOM05D008142 ORTHO05D009674 1.6e-10 70.5 181 35.4
RhsimUnG0205300 Rhododendron simsii HOM05D008142 ORTHO05D009674 2.7e-10 69.7 186 35.5
ECA236G2480 Erigeron canadensis HOM05D002418 ORTHO05D002572 4.5e-10 68.9 184 31.0
MD11G1276300 Malus domestica HOM05D015893 ORTHO05D019166 1.0e-09 67.8 196 29.6
MD03G1255600 Malus domestica HOM05D015893 ORTHO05D019166 2.9e-09 66.2 170 31.2
Migut.M00615 Erythranthe guttata HOM05D019704 ORTHO05D009674 3.2e-08 62.8 177 34.5
Eucgr.F03213 Eucalyptus grandis HOM05D008142 ORTHO05D009674 7.2e-08 61.6 187 32.6
Nitab4.5_0002209g0210 Nicotiana tabacum HOM05D011950 ORTHO05D009674 1.2e-07 60.8 91 42.9
RcHm_v2.0_Chr5g0028181 Rosa chinensis HOM05D008142 ORTHO05D009674 1.2e-07 60.8 175 30.9
FvH4_3g16930 Fragaria vesca HOM05D015893 ORTHO05D019166 1.6e-07 60.5 189 29.1
FAN11G0710 Fragaria x ananassa HOM05D015893 ORTHO05D019166 1.6e-07 60.5 189 29.1
Cc05_g10420 Coffea canephora HOM05D011950 ORTHO05D009674 2.1e-07 60.1 166 36.1
FAN16G3477 Fragaria x ananassa HOM05D015893 ORTHO05D019166 2.1e-07 60.1 189 29.1
Aqoxy1G01721 Aquilegia oxysepala HOM05D008142 ORTHO05D009674 3.6e-07 59.3 180 28.9
Nitab4.5_0020402g0020 Nicotiana tabacum HOM05D026636 ORTHO05D022967 3.6e-07 59.3 136 36.0
Potri.001G379400 Populus trichocarpa HOM05D008142 ORTHO05D009674 3.6e-07 59.3 184 31.5
FAN21G1907 Fragaria x ananassa HOM05D015893 ORTHO05D019166 4.7e-07 58.9 189 28.0
TAR629G2490 Trochodendron aralioides HOM05D008142 ORTHO05D009674 4.7e-07 58.9 139 35.3
Nn4g26546 Nelumbo nucifera HOM05D008142 ORTHO05D009674 6.1e-07 58.5 181 30.9
QL04p069966 Quercus lobata HOM05D008142 ORTHO05D009674 6.1e-07 58.5 168 32.1
Gohir.D01G033700 Gossypium hirsutum HOM05D008142 ORTHO05D009674 1.0e-06 57.8 184 28.3
Thecc.07G144200 Theobroma cacao HOM05D008142 ORTHO05D009674 1.8e-06 57.0 184 29.3
RcHm_v2.0_Chr5g0028161 Rosa chinensis HOM05D015893 ORTHO05D019166 2.3e-06 56.6 177 28.8
Nitab4.5_0004038g0030 Nicotiana tabacum HOM05D026636 ORTHO05D022967 3.0e-06 56.2 185 32.4
DCAR_017570 Daucus carota HOM05D019704 ORTHO05D009674 6.8e-06 55.1 194 30.4
Gorai.002G040900 Gossypium raimondii HOM05D008142 ORTHO05D009674 6.8e-06 55.1 182 28.0
DCAR_021049 Daucus carota HOM05D008142 ORTHO05D009674 8.8e-06 54.7 190 28.4
Gorai.002G040800 Gossypium raimondii HOM05D008142 ORTHO05D009674 8.8e-06 54.7 184 27.7


User provided reference genes

Program Settings