Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g029030 Solanum pennellii HOM05D007152 ORTHO05D008912 3.1e-92 342.0 208 100.0
PGSC0003DMG400017287 Solanum tuberosum HOM05D007152 ORTHO05D008912 1.2e-88 330.1 209 90.4
Solyc07g055660.2 Solanum lycopersicum HOM05D007152 ORTHO05D008912 2.4e-76 289.3 208 78.4
Nitab4.5_0007965g0010 Nicotiana tabacum HOM05D007152 ORTHO05D008912 3.5e-59 232.3 207 70.0
Nitab4.5_0000306g0360 Nicotiana tabacum HOM05D007152 ORTHO05D008912 5.4e-52 208.4 202 71.3
Peaxi162Scf00065g10111 Petunia axillaris HOM05D007152 ORTHO05D008912 1.2e-46 190.7 214 65.4
Dinv44343 Davidia involucrata HOM05D007152 ORTHO05D008912 4.3e-41 172.2 198 59.6
TAR362G0707 Trochodendron aralioides HOM05D007152 ORTHO05D008912 1.4e-36 157.1 206 54.9
CANSAT78G0935 Cannabis sativa HOM05D007152 ORTHO05D008912 2.7e-35 152.9 209 56.5
Hma1.2p1_1352F.1_g277500 Hydrangea macrophylla HOM05D007152 ORTHO05D008912 7.8e-35 151.4 205 55.1
Nn6g34202 Nelumbo nucifera HOM05D007152 ORTHO05D008912 5.1e-34 148.7 206 52.4
Thecc.04G290300 Theobroma cacao HOM05D007152 ORTHO05D008912 1.9e-33 146.7 212 47.6
Gorai.011G193700 Gossypium raimondii HOM05D007152 ORTHO05D008912 9.5e-33 144.4 210 47.6
Gohir.A10G167100 Gossypium hirsutum HOM05D007152 ORTHO05D008912 2.4e-31 139.8 210 46.7
Gohir.D10G173100 Gossypium hirsutum HOM05D007152 ORTHO05D008912 2.4e-31 139.8 210 45.7
GSVIVG01035097001 Vitis vinifera HOM05D007152 ORTHO05D008912 2.4e-31 139.8 206 48.1
Cc03_g01440 Coffea canephora HOM05D007152 ORTHO05D008912 4.4e-30 135.6 212 48.6
Duzib151G0510 Durio zibethinus HOM05D007152 ORTHO05D008912 5.8e-30 135.2 210 52.9
Prupe.1G130200 Prunus persica HOM05D007152 ORTHO05D008912 3.8e-29 132.5 206 50.5
TWI73G1002 Tripterygium wilfordii HOM05D007152 ORTHO05D008912 1.4e-28 130.6 208 52.4
QL06p010801 Quercus lobata HOM05D007152 ORTHO05D008912 1.6e-27 127.1 206 46.6
MD16G1162700 Malus domestica HOM05D007152 ORTHO05D008912 2.1e-27 126.7 206 48.1
Aqoxy2G02883 Aquilegia oxysepala HOM05D007152 ORTHO05D008912 6.0e-27 125.2 214 48.6
Haze_01149 Corylus avellana HOM05D007152 ORTHO05D008912 6.0e-27 125.2 206 50.0
Duzib212G0417 Durio zibethinus HOM05D007152 ORTHO05D008912 3.9e-26 122.5 213 44.1
MBI18_g04558_MAGBIO Magnolia biondii HOM05D000387 ORTHO05D008912 1.1e-25 120.9 217 39.6
Lsat_1_v5_gn_3_21801 Lactuca sativa HOM05D007152 ORTHO05D008912 2.5e-25 119.8 209 49.3
COL.COLO4_13806 Corchorus olitorius HOM05D007152 ORTHO05D008912 3.3e-25 119.4 206 39.3
CSS0046950 Camellia sinensis var. sinensis HOM05D007152 ORTHO05D008912 9.6e-25 117.9 198 51.0
Carub.0003s0633 Capsella rubella HOM05D007152 ORTHO05D008912 9.6e-25 117.9 209 51.7
CARHR081420 Cardamine hirsuta HOM05D007152 ORTHO05D008912 9.6e-25 117.9 206 49.0
Migut.G00085 Erythranthe guttata HOM05D007152 ORTHO05D008912 2.1e-24 116.7 213 45.5
CSS0044056 Camellia sinensis var. sinensis HOM05D007152 ORTHO05D008912 8.1e-24 114.8 198 50.0
Thhalv10022432m.g Eutrema salsugineum HOM05D007152 ORTHO05D008912 8.1e-24 114.8 208 51.9
Migut.G00124 Erythranthe guttata HOM05D007152 ORTHO05D008912 1.1e-23 114.4 212 44.3
MELO3C021305.2 Cucumis melo HOM05D007152 ORTHO05D008912 2.4e-23 113.2 207 43.0
THA.LOC104818902 Tarenaya hassleriana HOM05D007152 ORTHO05D008912 3.1e-23 112.8 204 37.7
ClCG06G004920 Citrullus lanatus HOM05D007152 ORTHO05D008912 6.9e-23 111.7 199 41.7
Aa31LG5G17390 Aethionema arabicum HOM05D007152 ORTHO05D008912 9.0e-23 111.3 208 46.6
AT3G06780 Arabidopsis thaliana HOM05D007152 ORTHO05D008912 2.6e-22 109.8 205 46.8
C05p60530 Brassica napus HOM05D007152 ORTHO05D008912 2.6e-22 109.8 203 48.8
BolC5t34707H Brassica oleracea HOM05D007152 ORTHO05D008912 2.6e-22 109.8 203 48.8
Cfa015435 Carpinus fangiana HOM05D007152 ORTHO05D008912 5.8e-22 108.6 206 46.6
Actinidia14275 Actinidia chinensis HOM05D007152 ORTHO05D008912 1.1e-20 104.4 201 45.8
Nn4g25735 Nelumbo nucifera HOM05D007152 ORTHO05D008912 1.9e-20 103.6 165 46.7
RcHm_v2.0_Chr4g0423591 Rosa chinensis HOM05D007152 ORTHO05D008912 1.9e-20 103.6 207 43.5
PSO407G0318 Papaver somniferum HOM05D007152 ORTHO05D008912 2.4e-20 103.2 210 49.0
Glyma.07G244800 Glycine max HOM05D007152 ORTHO05D008912 3.2e-20 102.8 208 47.6
AL3G17910 Arabidopsis lyrata HOM05D007152 ORTHO05D008912 5.4e-20 102.1 194 47.4
CsaV3_6G022730 Cucumis sativus L. HOM05D007152 ORTHO05D008912 7.1e-20 101.7 194 41.2
Sp3g05760 Schrenkiella parvula HOM05D007152 ORTHO05D008912 1.2e-19 100.9 206 49.5
DCAR_027047 Daucus carota HOM05D007152 ORTHO05D008912 1.6e-19 100.5 160 54.4
SalBow2G3473 Salvia bowleyana HOM05D007152 ORTHO05D008912 2.1e-19 100.1 213 39.4
Glyma.17G029000 Glycine max HOM05D007152 ORTHO05D008912 4.6e-19 99.0 208 44.7
VMungo1215G1115 Vigna mungo HOM05D007152 ORTHO05D008912 4.6e-19 99.0 207 43.0
A05p41300 Brassica napus HOM05D007152 ORTHO05D008912 6.0e-19 98.6 207 49.3
ECA246G2204 Erigeron canadensis HOM05D007152 ORTHO05D008912 6.0e-19 98.6 202 41.6
Manes.03G199400 Manihot esculenta HOM05D007152 ORTHO05D008912 6.0e-19 98.6 208 40.4
Eucgr.H03966 Eucalyptus grandis HOM05D007152 ORTHO05D008912 1.0e-18 97.8 215 45.1
BraA05t22853Z Brassica rapa HOM05D007152 ORTHO05D008912 3.0e-18 96.3 207 48.8
Nn2g11629 Nelumbo nucifera HOM05D000191 ORTHO05D000122 5.1e-18 95.5 178 39.3
CiPaw.01G144800 Carya illinoinensis HOM05D007152 ORTHO05D008912 1.1e-17 94.4 207 42.5
CiPaw.02G079300 Carya illinoinensis HOM05D007152 ORTHO05D008912 1.1e-17 94.4 220 36.8
Phvul.003G108000 Phaseolus vulgaris HOM05D007152 ORTHO05D008912 1.1e-17 94.4 210 43.8
PGR004G0508 Punica granatum HOM05D007152 ORTHO05D008912 3.3e-17 92.8 206 36.9
FvH4_4g18790 Fragaria vesca HOM05D007152 ORTHO05D008912 4.3e-17 92.4 207 42.0
FAN12G2857 Fragaria x ananassa HOM05D007152 ORTHO05D008912 4.3e-17 92.4 207 42.0
FAN12G4239 Fragaria x ananassa HOM05D007152 ORTHO05D008912 9.6e-17 91.3 207 41.5
Lj4g0009216 Lotus japonicus HOM05D007152 ORTHO05D008912 2.8e-16 89.7 151 45.7
Dinv29715 Davidia involucrata HOM05D007152 ORTHO05D008912 1.4e-15 87.4 165 49.7
FAN17G1647 Fragaria x ananassa HOM05D007152 ORTHO05D008912 1.8e-15 87.0 207 42.5
BNapus_Darmor_BZH_scaffold_117p00080 Brassica napus HOM05D007152 ORTHO05D008912 2.0e-14 83.6 205 42.0
FAN07G1963 Fragaria x ananassa HOM05D007152 ORTHO05D008912 2.6e-14 83.2 207 40.1
Potri.008G211000 Populus trichocarpa HOM05D007152 ORTHO05D008912 2.6e-14 83.2 212 45.8
BraA01t04415Z Brassica rapa HOM05D007152 ORTHO05D008912 3.4e-14 82.8 205 43.4
Lsat_1_v5_gn_6_76040 Lactuca sativa HOM05D007152 ORTHO05D008912 3.4e-14 82.8 202 44.6
HanXRQChr07g0199211 Helianthus annuus HOM05D007152 ORTHO05D008912 4.5e-14 82.4 208 44.2
Lalb_Chr12g0201151 Lupinus albus HOM05D007152 ORTHO05D008912 5.8e-14 82.0 202 43.1
Sed0011406 Sechium edule HOM05D007152 ORTHO05D008912 7.6e-14 81.6 210 39.0
Eucgr.B01571 Eucalyptus grandis HOM05D007152 ORTHO05D008912 9.9e-14 81.3 201 38.8
Sc13g0003130 Simmondsia chinensis HOM05D007152 ORTHO05D008912 1.7e-13 80.5 149 47.0
BolC3t16516H Brassica oleracea HOM05D007152 ORTHO05D008912 3.8e-13 79.3 205 36.6
A03p34880 Brassica napus HOM05D007152 ORTHO05D008912 1.4e-12 77.4 204 41.2
SGA_v2.0_scaffold18G08363 Striga asiatica HOM05D007152 ORTHO05D008912 3.2e-12 76.3 211 39.8
Atru.chr4.2916 Acer truncatum HOM05D007152 ORTHO05D008912 7.1e-12 75.1 210 37.1
Actinidia13384 Actinidia chinensis HOM05D007152 ORTHO05D008912 1.2e-11 74.3 212 33.5
C03p42450 Brassica napus HOM05D007152 ORTHO05D008912 1.6e-11 73.9 188 37.8
Ca_21475_v3 Cicer arietinum L. HOM05D007152 ORTHO05D008912 1.6e-11 73.9 202 39.6
Medtr4g120400 Medicago truncatula HOM05D007152 ORTHO05D008912 1.6e-11 73.9 207 39.6
Potri.010G006600 Populus trichocarpa HOM05D007152 ORTHO05D008912 2.1e-11 73.6 210 41.0
EL10Ac3g06653 Beta vulgaris HOM05D007152 ORTHO05D008912 7.9e-11 71.6 169 46.7
ECA240G1188 Erigeron canadensis HOM05D007152 ORTHO05D008912 7.9e-11 71.6 194 35.6
CDE02G4694 Ceratophyllum demersum HOM05D007152 ORTHO05D008912 1.3e-10 70.9 165 41.2
Ciclev10006039m.g Citrus clementina HOM05D007152 ORTHO05D008912 2.3e-10 70.1 207 37.7
Sabra08G0151100 Salix brachista HOM05D007152 ORTHO05D008912 3.0e-10 69.7 49 67.3
Eucgr.G02139 Eucalyptus grandis HOM05D007152 ORTHO05D008912 3.9e-10 69.3 64 57.8
Lalb_Chr20g0121161 Lupinus albus HOM05D007152 ORTHO05D008912 3.9e-10 69.3 140 45.7
Sabra10G0005500 Salix brachista HOM05D007152 ORTHO05D008912 8.7e-10 68.2 206 36.9
Eucgr.G02132 Eucalyptus grandis HOM05D007152 ORTHO05D008912 1.5e-09 67.4 64 57.8
AUR62018060 Chenopodium quinoa HOM05D007152 ORTHO05D008912 3.3e-09 66.2 56 57.1
Manes.15G009801 Manihot esculenta HOM05D007152 ORTHO05D008912 1.3e-08 64.3 60 55.0
CDE09G0901 Ceratophyllum demersum HOM05D007152 ORTHO05D008912 3.7e-08 62.8 164 47.0
RcHm_v2.0_Chr7g0221621 Rosa chinensis HOM05D007152 ORTHO05D008912 8.1e-08 61.6 48 56.2
PSO170G2244 Papaver somniferum HOM05D007152 ORTHO05D008912 2.4e-07 60.1 173 46.8
Dinv28193 Davidia involucrata HOM05D007152 ORTHO05D008912 3.1e-07 59.7 30 76.7
ATR0693G346 Amborella trichopoda HOM05D007152 ORTHO05D008912 4.0e-07 59.3 207 39.1


User provided reference genes

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