Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g028010 Solanum pennellii HOM05D006713 ORTHO05D008601 4.7e-168 594.3 282 100.0
Solyc07g054070.4 Solanum lycopersicum HOM05D006713 ORTHO05D008601 1.7e-165 585.9 281 98.9
PGSC0003DMG400018345 Solanum tuberosum HOM05D006713 ORTHO05D008601 2.6e-158 562.0 281 95.7
CAN.G248.32 Capsicum annuum HOM05D006713 ORTHO05D008601 6.2e-144 514.2 280 86.8
Peaxi162Scf00132g00240 Petunia axillaris HOM05D006713 ORTHO05D008601 4.0e-135 485.0 280 81.8
Nitab4.5_0000512g0100 Nicotiana tabacum HOM05D006713 ORTHO05D008601 4.8e-112 408.3 281 72.6
Dinv26425 Davidia involucrata HOM05D006713 ORTHO05D008601 3.1e-111 405.6 276 68.5
CSS0037354 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 4.5e-110 401.7 276 68.1
Nitab4.5_0002169g0110 Nicotiana tabacum HOM05D006713 ORTHO05D008601 5.9e-110 401.4 281 72.2
RcHm_v2.0_Chr2g0126401 Rosa chinensis HOM05D006713 ORTHO05D008601 1.0e-109 400.6 262 69.5
Atru.chr6.3001 Acer truncatum HOM05D006713 ORTHO05D008601 4.7e-107 391.7 276 65.9
FvH4_6g26190 Fragaria vesca HOM05D006713 ORTHO05D008601 6.1e-107 391.3 277 66.1
CSS0039998 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 7.9e-107 391.0 282 66.3
FAN05G2673 Fragaria x ananassa HOM05D006713 ORTHO05D008601 1.8e-106 389.8 262 68.3
Manes.12G089598 Manihot esculenta HOM05D006713 ORTHO05D008601 2.3e-106 389.4 265 68.7
arahy.Tifrunner.gnm1.ann1.Q4ZJSX Arachis hypogaea HOM05D006713 ORTHO05D008601 3.9e-106 388.7 263 69.2
GSVIVG01020539001 Vitis vinifera HOM05D006713 ORTHO05D008601 5.1e-106 388.3 265 67.2
arahy.Tifrunner.gnm1.ann1.FW5TAU Arachis hypogaea HOM05D006713 ORTHO05D008601 2.0e-105 386.3 263 68.8
Actinidia09856 Actinidia chinensis HOM05D006713 ORTHO05D008601 5.7e-105 384.8 276 64.1
Ciclev10015547m.g Citrus clementina HOM05D006713 ORTHO05D008601 5.7e-105 384.8 280 63.6
FAN09G0901 Fragaria x ananassa HOM05D006713 ORTHO05D008601 5.7e-105 384.8 262 67.6
TAR235G0002 Trochodendron aralioides HOM05D006713 ORTHO05D008601 5.7e-105 384.8 265 64.5
Lalb_Chr14g0366891 Lupinus albus HOM05D006713 ORTHO05D008601 7.4e-105 384.4 260 68.5
HanXRQChr17g0556501 Helianthus annuus HOM05D006713 ORTHO05D008601 9.7e-105 384.0 261 66.3
Glyma.13G297500 Glycine max HOM05D006713 ORTHO05D008601 1.3e-104 383.6 259 67.2
Migut.H01188 Erythranthe guttata HOM05D006713 ORTHO05D008601 1.7e-104 383.3 283 65.7
MD17G1241000 Malus domestica HOM05D006713 ORTHO05D008601 1.7e-104 383.3 268 66.8
Aqoxy1G02470 Aquilegia oxysepala HOM05D006713 ORTHO05D008601 2.2e-104 382.9 283 64.3
Hma1.2p1_1201F.1_g266570 Hydrangea macrophylla HOM05D006713 ORTHO05D008601 2.2e-104 382.9 294 61.9
QL02p049491 Quercus lobata HOM05D006713 ORTHO05D008601 6.3e-104 381.3 265 65.7
QL08p038662 Quercus lobata HOM05D006713 ORTHO05D008601 6.3e-104 381.3 265 65.7
Cpa.g.sc34.156 Carica papaya HOM05D006713 ORTHO05D008601 1.1e-103 380.6 286 63.6
FAN02G3934 Fragaria x ananassa HOM05D006713 ORTHO05D008601 1.1e-103 380.6 276 65.2
Eucgr.A01814 Eucalyptus grandis HOM05D006713 ORTHO05D008601 1.4e-103 380.2 269 63.6
TWI18G1058 Tripterygium wilfordii HOM05D006713 ORTHO05D008601 1.8e-103 379.8 281 63.3
Duzib052G0863 Durio zibethinus HOM05D006713 ORTHO05D008601 4.1e-103 378.6 279 63.8
Nn1g06572 Nelumbo nucifera HOM05D006713 ORTHO05D008601 7.0e-103 377.9 277 65.0
Lj3g0026133 Lotus japonicus HOM05D006713 ORTHO05D008601 9.1e-103 377.5 277 65.0
ECA234G3347 Erigeron canadensis HOM05D006713 ORTHO05D008601 1.5e-102 376.7 260 64.6
MSTRG.12823 Avicennia marina HOM05D006713 ORTHO05D008601 2.6e-102 375.9 279 64.2
Gohir.D02G180200 Gossypium hirsutum HOM05D006713 ORTHO05D008601 5.9e-102 374.8 279 62.7
VMungo1080G0618 Vigna mungo HOM05D006713 ORTHO05D008601 5.9e-102 374.8 259 65.6
Gorai.005G201900 Gossypium raimondii HOM05D006713 ORTHO05D008601 1.7e-101 373.2 280 62.5
Phvul.005G104000 Phaseolus vulgaris HOM05D006713 ORTHO05D008601 5.0e-101 371.7 277 62.5
Cc05_g07100 Coffea canephora HOM05D006713 ORTHO05D008601 6.5e-101 371.3 263 65.0
Gohir.A03G157000 Gossypium hirsutum HOM05D006713 ORTHO05D008601 6.5e-101 371.3 280 62.1
CDE10G0241 Ceratophyllum demersum HOM05D006713 ORTHO05D008601 1.9e-100 369.8 262 65.3
CsaV3_6G012990 Cucumis sativus L. HOM05D006713 ORTHO05D008601 2.5e-100 369.4 262 66.0
Lsat_1_v5_gn_8_133201 Lactuca sativa HOM05D006713 ORTHO05D008601 2.5e-100 369.4 284 60.6
MBI06_g06484_MAGBIO Magnolia biondii HOM05D006713 ORTHO05D008601 3.2e-100 369.0 277 61.7
Potri.013G132100 Populus trichocarpa HOM05D006713 ORTHO05D008601 5.5e-100 368.2 260 64.6
THA.LOC104815960 Tarenaya hassleriana HOM05D006713 ORTHO05D008601 1.6e-99 366.7 275 59.6
Rhsim06G0143600 Rhododendron simsii HOM05D006713 ORTHO05D008601 3.6e-99 365.5 264 63.3
Sc21g0002760 Simmondsia chinensis HOM05D006713 ORTHO05D008601 8.0e-99 364.4 262 61.5
vmacro12297 Vaccinium macrocarpon HOM05D006713 ORTHO05D008601 1.0e-98 364.0 261 64.8
Psat5g271440 Pisum sativum HOM05D006713 ORTHO05D008601 1.4e-98 363.6 278 62.2
Thecc.02G179100 Theobroma cacao HOM05D006713 ORTHO05D008601 1.4e-98 363.6 243 67.9
Medtr2g090335 Medicago truncatula HOM05D006713 ORTHO05D008601 3.0e-98 362.5 264 62.9
Sabra13G0111600 Salix brachista HOM05D006713 ORTHO05D008601 5.2e-98 361.7 303 58.1
Ah.01g015180 Amaranthus hybridus HOM05D006713 ORTHO05D008601 2.0e-97 359.8 265 61.9
CANSAT78G0617 Cannabis sativa HOM05D006713 ORTHO05D008601 2.6e-97 359.4 262 64.5
DCAR_021241 Daucus carota HOM05D006713 ORTHO05D008601 2.0e-94 349.7 280 59.3
CiPaw.03G176500 Carya illinoinensis HOM05D006713 ORTHO05D008601 7.7e-94 347.8 252 66.7
HPP92_023892 Vanilla planifolia HOM05D006713 ORTHO05D008601 1.0e-93 347.4 269 60.2
BcaC07g42233 Brassica carinata HOM05D006713 ORTHO05D008601 1.7e-93 346.7 262 60.3
EL10Ac9g20760 Beta vulgaris HOM05D006713 ORTHO05D008601 2.2e-93 346.3 319 54.2
HPP92_023829 Vanilla planifolia HOM05D006713 ORTHO05D008601 2.9e-93 345.9 269 59.5
BcaC07g42238 Brassica carinata HOM05D006713 ORTHO05D008601 3.8e-93 345.5 263 60.5
BolC8t52795H Brassica oleracea HOM05D006713 ORTHO05D008601 3.8e-93 345.5 263 60.5
Lj8A113G48 Lonicera japonica HOM05D006713 ORTHO05D008601 3.8e-93 345.5 259 62.9
ATR0665G517 Amborella trichopoda HOM05D006713 ORTHO05D008601 5.0e-93 345.1 260 58.1
C08p52690 Brassica napus HOM05D006713 ORTHO05D008601 5.0e-93 345.1 263 60.5
Aa31LG1G20990 Aethionema arabicum HOM05D006713 ORTHO05D008601 1.5e-92 343.6 263 58.9
Sp1g02570 Schrenkiella parvula HOM05D006713 ORTHO05D008601 1.6e-91 340.1 281 57.3
A09p68250 Brassica napus HOM05D006713 ORTHO05D008601 2.1e-91 339.7 263 59.3
BraA09t42160Z Brassica rapa HOM05D006713 ORTHO05D008601 2.1e-91 339.7 263 59.3
Sed0026559 Sechium edule HOM05D006713 ORTHO05D008601 2.1e-91 339.7 249 65.1
AT1G03687 Arabidopsis thaliana HOM05D006713 ORTHO05D008601 4.7e-91 338.6 263 60.1
AL1G13180 Arabidopsis lyrata HOM05D006713 ORTHO05D008601 6.1e-91 338.2 277 57.4
AUR62038189 Chenopodium quinoa HOM05D006713 ORTHO05D008601 6.1e-91 338.2 268 59.7
Thhalv10007899m.g Eutrema salsugineum HOM05D006713 ORTHO05D008601 4.0e-90 335.5 282 56.7
Carub.0001s0279 Capsella rubella HOM05D006713 ORTHO05D008601 5.2e-90 335.1 260 60.0
CARHR003020 Cardamine hirsuta HOM05D006713 ORTHO05D008601 7.5e-89 331.3 284 56.3
Hund01101 Selenicereus undatus HOM05D006713 ORTHO05D008601 2.8e-88 329.3 328 50.9
Zm00001eb273220 Zea mays HOM05D006713 ORTHO05D008601 4.5e-86 322.0 266 57.1
ClCG02G017610 Citrullus lanatus HOM05D006713 ORTHO05D008601 1.6e-83 313.5 245 61.6
PSO541G1719 Papaver somniferum HOM05D006713 ORTHO05D008601 4.7e-83 312.0 277 57.0
PSO675G6747 Papaver somniferum HOM05D006713 ORTHO05D008601 4.0e-82 308.9 277 56.7
unitig_62.g23167 Utricularia gibba HOM05D006713 ORTHO05D008601 3.7e-80 302.4 247 59.5
Os06g0342750 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 7.0e-79 298.1 238 60.5
Haze_13156 Corylus avellana HOM05D006713 ORTHO05D008601 5.0e-77 292.0 280 52.5
Prupe.3G137200 Prunus persica HOM05D006713 ORTHO05D008601 2.0e-73 280.0 262 52.3
Ca_01502_v3 Cicer arietinum L. HOM05D006713 ORTHO05D008601 2.2e-72 276.6 264 52.7
AUR62038063 Chenopodium quinoa HOM05D006713 ORTHO05D008601 2.9e-72 276.2 192 65.6
Glyma.12G203966 Glycine max HOM05D006713 ORTHO05D008601 2.9e-72 276.2 174 70.7
SalBow1G6029 Salvia bowleyana HOM05D006713 ORTHO05D008601 9.2e-71 271.2 170 71.8
AagrBONN_evm.TU.Sc2ySwM_117.1346 Anthoceros agrestis HOM05D006713 ORTHO05D008601 3.9e-69 265.8 274 46.4
Mapoly0088s0019 Marchantia polymorpha HOM05D006713 ORTHO05D008601 2.3e-66 256.5 280 46.4
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 2.5e-60 236.5 320 44.1
SMO117G0197 Selaginella moellendorffii HOM05D006713 ORTHO05D008601 9.8e-57 224.6 211 49.3
MELO3C013617.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.1e-52 211.1 272 41.9
CBR_g35040 Chara braunii HOM05D006713 ORTHO05D008601 1.6e-38 164.1 267 37.8
SalBow1G1793 Salvia bowleyana HOM05D006713 ORTHO05D008601 1.9e-36 157.1 142 54.2
MELO3C001128.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.1e-26 124.8 78 74.4
Oeu045818.1 Olea europaea HOM05D006713 ORTHO05D008601 8.7e-13 78.6 54 63.0
MELO3C013612.2 Cucumis melo HOM05D006713 ORTHO05D008601 3.3e-12 76.6 59 55.9
MELO3C035062.2 Cucumis melo HOM05D006713 ORTHO05D008601 7.6e-09 65.5 38 73.7


User provided reference genes

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