Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g024280 Solanum pennellii HOM05D007430 ORTHO05D009322 2.7e-55 218.4 107 100.0
PGSC0003DMG400006148 Solanum tuberosum HOM05D007430 ORTHO05D009322 7.3e-53 210.3 107 97.2
Solyc07g047840.2 Solanum lycopersicum HOM05D007430 ORTHO05D009322 1.1e-51 206.5 107 94.4
CAN.G854.12 Capsicum annuum HOM05D007430 ORTHO05D009322 2.4e-48 195.3 107 90.7
ECA238G2295 Erigeron canadensis HOM05D007430 ORTHO05D009322 8.1e-36 153.7 108 71.3
Lsat_1_v5_gn_2_89680 Lactuca sativa HOM05D007430 ORTHO05D009322 2.4e-35 152.1 104 71.2
SGA_v2.0_scaffold148G36438 Striga asiatica HOM05D007430 ORTHO05D009322 3.1e-35 151.8 109 68.8
HanXRQChr14g0452451 Helianthus annuus HOM05D007430 ORTHO05D009322 2.6e-34 148.7 109 67.9
Oeu007080.1 Olea europaea HOM05D007430 ORTHO05D009322 2.6e-34 148.7 115 67.0
Hma1.2p1_1502F.1_g287440 Hydrangea macrophylla HOM05D007430 ORTHO05D009322 4.4e-34 147.9 113 68.1
Dinv33859 Davidia involucrata HOM05D007430 ORTHO05D009322 7.6e-34 147.1 115 67.0
MSTRG.3403 Avicennia marina HOM05D007430 ORTHO05D009322 9.9e-34 146.7 114 66.7
Migut.O00383 Erythranthe guttata HOM05D007430 ORTHO05D009322 1.3e-33 146.4 109 68.8
CSS0032789 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 8.4e-33 143.7 114 64.0
CSS0049466 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 8.4e-33 143.7 114 64.0
DCAR_003124 Daucus carota HOM05D007430 ORTHO05D009322 1.1e-32 143.3 114 65.8
Nitab4.5_0009877g0030 Nicotiana tabacum HOM05D007430 ORTHO05D009322 1.9e-32 142.5 79 87.3
Thecc.04G105400 Theobroma cacao HOM05D007430 ORTHO05D009322 2.4e-32 142.1 113 62.8
Eucgr.C00827 Eucalyptus grandis HOM05D007430 ORTHO05D009322 1.2e-31 139.8 108 64.8
Gohir.A07G179900 Gossypium hirsutum HOM05D007430 ORTHO05D009322 2.1e-31 139.0 111 63.1
Cc01_g15140 Coffea canephora HOM05D007430 ORTHO05D009322 2.7e-31 138.7 115 64.3
Duzib138G0563 Durio zibethinus HOM05D007430 ORTHO05D009322 3.5e-31 138.3 113 58.4
Gohir.D07G186800 Gossypium hirsutum HOM05D007430 ORTHO05D009322 3.5e-31 138.3 111 63.1
Gorai.001G207400 Gossypium raimondii HOM05D007430 ORTHO05D009322 3.5e-31 138.3 111 63.1
CANSAT64G0392 Cannabis sativa HOM05D007430 ORTHO05D009322 4.6e-31 137.9 102 66.7
GSVIVG01037660001 Vitis vinifera HOM05D007430 ORTHO05D009322 4.6e-31 137.9 109 63.3
Actinidia36267 Actinidia chinensis HOM05D007430 ORTHO05D009322 6.0e-31 137.5 111 64.0
vmacro05615 Vaccinium macrocarpon HOM05D007430 ORTHO05D009322 7.8e-31 137.1 107 64.5
QL02p065966 Quercus lobata HOM05D007430 ORTHO05D009322 1.7e-30 136.0 109 62.4
TAR371G1216 Trochodendron aralioides HOM05D007430 ORTHO05D009322 2.3e-30 135.6 109 63.3
Nn8g40106 Nelumbo nucifera HOM05D007430 ORTHO05D009322 3.0e-30 135.2 108 61.1
Prupe.3G249500 Prunus persica HOM05D007430 ORTHO05D009322 3.0e-30 135.2 109 65.1
TWI34G0957 Tripterygium wilfordii HOM05D007430 ORTHO05D009322 3.0e-30 135.2 108 63.9
Nitab4.5_0000441g0090 Nicotiana tabacum HOM05D007430 ORTHO05D009322 5.1e-30 134.4 72 88.9
PGR004G1880 Punica granatum HOM05D007430 ORTHO05D009322 5.1e-30 134.4 107 63.6
Ca_14394_v3 Cicer arietinum L. HOM05D007430 ORTHO05D009322 6.6e-30 134.0 109 62.4
THA.LOC104820974 Tarenaya hassleriana HOM05D007430 ORTHO05D009322 6.6e-30 134.0 101 61.4
Potri.017G099600 Populus trichocarpa HOM05D007430 ORTHO05D009322 8.7e-30 133.7 106 63.2
Sabra17G0085900 Salix brachista HOM05D007430 ORTHO05D009322 8.7e-30 133.7 107 63.6
FAN14G5598 Fragaria x ananassa HOM05D007430 ORTHO05D009322 1.9e-29 132.5 109 62.4
RcHm_v2.0_Chr2g0164961 Rosa chinensis HOM05D007430 ORTHO05D009322 2.5e-29 132.1 109 62.4
CiPaw.03G083500 Carya illinoinensis HOM05D007430 ORTHO05D009322 5.6e-29 131.0 108 58.3
MD17G1065300 Malus domestica HOM05D007430 ORTHO05D009322 9.6e-29 130.2 108 63.9
Lalb_Chr02g0158751 Lupinus albus HOM05D007430 ORTHO05D009322 1.3e-28 129.8 110 60.0
unitig_32.g10757 Utricularia gibba HOM05D000600 ORTHO05D000432 1.3e-28 129.8 110 59.1
FAN05G2487 Fragaria x ananassa HOM05D007430 ORTHO05D009322 1.6e-28 129.4 109 60.6
Aqoxy3G00539 Aquilegia oxysepala HOM05D007430 ORTHO05D009322 2.8e-28 128.6 108 59.3
Sc10g0000620 Simmondsia chinensis HOM05D007430 ORTHO05D009322 4.8e-28 127.9 109 60.6
Manes.02G059000 Manihot esculenta HOM05D007430 ORTHO05D009322 8.1e-28 127.1 108 61.1
FAN09G2572 Fragaria x ananassa HOM05D007430 ORTHO05D009322 1.4e-27 126.3 108 60.2
MBI16_g22331_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 1.4e-27 126.3 108 56.5
arahy.Tifrunner.gnm1.ann1.LXP3AQ Arachis hypogaea HOM05D007430 ORTHO05D009322 1.8e-27 125.9 110 58.2
arahy.Tifrunner.gnm1.ann1.T6F203 Arachis hypogaea HOM05D007430 ORTHO05D009322 1.8e-27 125.9 110 58.2
Lj2g0026299 Lotus japonicus HOM05D007430 ORTHO05D009322 1.8e-27 125.9 109 57.8
TPR.G15952 Trifolium pratense HOM05D007430 ORTHO05D009322 1.8e-27 125.9 109 56.9
Atru.chr8.658 Acer truncatum HOM05D007430 ORTHO05D009322 4.0e-27 124.8 109 56.9
Cpa.g.sc14.221 Carica papaya HOM05D007430 ORTHO05D009322 4.0e-27 124.8 113 59.3
Glyma.19G034200 Glycine max HOM05D007430 ORTHO05D009322 5.3e-27 124.4 109 56.0
Medtr6g015965 Medicago truncatula HOM05D007430 ORTHO05D009322 6.9e-27 124.0 109 58.7
TAR629G2042 Trochodendron aralioides HOM05D007430 ORTHO05D009322 6.9e-27 124.0 108 57.4
MELO3C032688.2 Cucumis melo HOM05D007430 ORTHO05D009322 1.5e-26 122.9 105 59.0
PSO478G2979 Papaver somniferum HOM05D007430 ORTHO05D009322 1.5e-26 122.9 108 59.3
SalBow1G0910 Salvia bowleyana HOM05D000293 ORTHO05D000180 1.5e-26 122.9 99 64.6
EL10Ac8g20552 Beta vulgaris HOM05D007430 ORTHO05D009322 2.0e-26 122.5 109 54.1
Os03g0414400 Oryza sativa ssp. japonica HOM05D007430 ORTHO05D009322 2.0e-26 122.5 109 53.2
Aa31LG11G13770 Aethionema arabicum HOM05D007430 ORTHO05D009322 2.6e-26 122.1 100 58.0
Ciclev10013162m.g Citrus clementina HOM05D007430 ORTHO05D009322 2.6e-26 122.1 113 55.8
AUR62023164 Chenopodium quinoa HOM05D007430 ORTHO05D009322 3.4e-26 121.7 109 55.0
PSO017G6770 Papaver somniferum HOM05D007430 ORTHO05D009322 4.5e-26 121.3 108 59.3
VMungo0464G1827 Vigna mungo HOM05D007430 ORTHO05D009322 5.8e-26 120.9 110 55.5
ClCG07G016000 Citrullus lanatus HOM05D007430 ORTHO05D009322 2.2e-25 119.0 106 55.7
CsaV3_4G010120 Cucumis sativus L. HOM05D007430 ORTHO05D009322 2.2e-25 119.0 115 55.7
AUR62009486 Chenopodium quinoa HOM05D007430 ORTHO05D009322 2.9e-25 118.6 105 54.3
C09p61270 Brassica napus HOM05D007430 ORTHO05D009322 6.4e-25 117.5 100 54.0
Phvul.004G041900 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 6.4e-25 117.5 109 51.4
Phvul.004G042100 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 6.4e-25 117.5 108 51.9
AL6G26650 Arabidopsis lyrata HOM05D007430 ORTHO05D009322 1.9e-24 115.9 100 56.0
AT5G15802 Arabidopsis thaliana HOM05D007430 ORTHO05D009322 1.9e-24 115.9 100 56.0
BcaC04g18935 Brassica carinata HOM05D007430 ORTHO05D009322 1.9e-24 115.9 100 53.0
BolC9t58969H Brassica oleracea HOM05D007430 ORTHO05D009322 1.9e-24 115.9 100 53.0
Sed0003360 Sechium edule HOM05D007430 ORTHO05D009322 2.4e-24 115.5 106 56.6
ATR0559G319 Amborella trichopoda HOM05D007430 ORTHO05D009322 3.2e-24 115.2 106 52.8
Thhalv10015108m.g Eutrema salsugineum HOM05D007430 ORTHO05D009322 3.2e-24 115.2 102 55.9
Hund13678 Selenicereus undatus HOM05D007430 ORTHO05D009322 3.2e-24 115.2 106 54.7
CARHR197520 Cardamine hirsuta HOM05D007430 ORTHO05D009322 4.2e-24 114.8 101 55.4
A10p23220 Brassica napus HOM05D007430 ORTHO05D009322 5.4e-24 114.4 100 52.0
BraA10t44390Z Brassica rapa HOM05D007430 ORTHO05D009322 5.4e-24 114.4 100 52.0
Duzib133G1191 Durio zibethinus HOM05D007430 ORTHO05D009322 5.4e-24 114.4 75 70.7
CDE09G0787 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 7.1e-24 114.0 105 57.1
HPP92_007986 Vanilla planifolia HOM05D007430 ORTHO05D009322 2.1e-23 112.5 100 58.0
FvH4_6g46430 Fragaria vesca HOM05D007430 ORTHO05D009322 6.0e-23 110.9 99 60.6
Carub.0006s1396 Capsella rubella HOM05D007430 ORTHO05D009322 2.3e-22 109.0 100 53.0
Duzib138G1572 Durio zibethinus HOM05D007430 ORTHO05D009322 3.9e-22 108.2 117 49.6
MD09G1073800 Malus domestica HOM05D007430 ORTHO05D009322 1.1e-21 106.7 65 80.0
SEGI_38988 Sequoiadendron giganteum HOM05D007430 ORTHO05D009322 8.1e-20 100.5 103 46.6
Sp6g28310 Schrenkiella parvula HOM05D007430 ORTHO05D009322 6.9e-19 97.4 101 49.5
AagrBONN_evm.TU.Sc2ySwM_228.315 Anthoceros agrestis HOM05D007430 ORTHO05D009322 1.2e-18 96.7 103 44.7
Pp3c7_870 Physcomitrium patens HOM05D007430 ORTHO05D009322 3.4e-18 95.1 98 45.9
CDE02G4259 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 5.8e-18 94.4 73 63.0
FAN02G0166 Fragaria x ananassa HOM05D007430 ORTHO05D009322 9.9e-18 93.6 96 56.2
Psat1g066840 Pisum sativum HOM05D007430 ORTHO05D009322 1.3e-17 93.2 72 61.1
MBI16_g39931_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 2.4e-16 89.0 108 44.4
Mapoly0015s0072 Marchantia polymorpha HOM05D007430 ORTHO05D009322 7.1e-16 87.4 99 44.4
Rhsim10G0056400 Rhododendron simsii HOM05D007430 ORTHO05D009322 1.6e-07 59.7 53 58.5
CBR_g37835 Chara braunii HOM05D007430 ORTHO05D009322 4.6e-07 58.2 73 38.4
COL.COLO4_08471 Corchorus olitorius HOM05D007430 ORTHO05D009322 6.0e-07 57.8 36 77.8


User provided reference genes

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