Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g024260 Solanum pennellii HOM05D037802 ORTHO05D004423 6.7e-61 237.3 129 100.0
Solyc07g047827.1 Solanum lycopersicum HOM05D037802 ORTHO05D004423 5.3e-58 227.6 129 93.0
CAN.G1397.7 Capsicum annuum HOM05D037802 ORTHO05D004423 1.2e-44 183.3 135 80.7
CAN.G294.21 Capsicum annuum HOM05D004793 ORTHO05D004423 3.4e-12 75.5 112 44.6
Manes.13G062900 Manihot esculenta HOM05D004793 ORTHO05D004423 9.8e-12 73.9 130 40.8
Manes.03G138300 Manihot esculenta HOM05D004793 ORTHO05D004423 7.0e-10 67.8 117 44.4
Sabra14G0125700 Salix brachista HOM05D004793 ORTHO05D004423 3.5e-09 65.5 125 40.8
Glyma.14G007800 Glycine max HOM05D004793 ORTHO05D004423 6.0e-09 64.7 115 39.1
Thecc.01G191000 Theobroma cacao HOM05D004793 ORTHO05D004423 6.0e-09 64.7 116 44.0
COL.COLO4_08493 Corchorus olitorius HOM05D004793 ORTHO05D004423 6.6e-08 61.2 127 40.9
Cpa.g.sc211.5 Carica papaya HOM05D004793 ORTHO05D004423 1.1e-07 60.5 122 37.7
Gohir.A07G190700 Gossypium hirsutum HOM05D004793 ORTHO05D004423 1.1e-07 60.5 120 40.8
Gohir.D07G197000 Gossypium hirsutum HOM05D004793 ORTHO05D004423 1.1e-07 60.5 120 40.8
Gorai.001G220800 Gossypium raimondii HOM05D004793 ORTHO05D004423 1.1e-07 60.5 120 40.8
PGR142G2586 Punica granatum HOM05D004793 ORTHO05D004423 1.1e-07 60.5 111 41.4
RcHm_v2.0_Chr2g0156651 Rosa chinensis HOM05D004793 ORTHO05D004423 1.1e-07 60.5 116 39.7
CiPaw.03G278900 Carya illinoinensis HOM05D004793 ORTHO05D004423 1.5e-07 60.1 121 39.7
Duzib138G1142 Durio zibethinus HOM05D004793 ORTHO05D004423 1.5e-07 60.1 116 40.5
Hma1.2p1_1825F.1_g304390 Hydrangea macrophylla HOM05D004793 ORTHO05D004423 1.5e-07 60.1 118 38.1
Hma1.2p1_0133F.1_g061430 Hydrangea macrophylla HOM05D004793 ORTHO05D004423 2.5e-07 59.3 116 37.1
Psat2g004520 Pisum sativum HOM05D004793 ORTHO05D004423 3.3e-07 58.9 135 37.0
TPR.G1320 Trifolium pratense HOM05D004793 ORTHO05D004423 5.6e-07 58.2 113 39.8
Manes.12G061300 Manihot esculenta HOM05D004793 ORTHO05D004423 7.3e-07 57.8 133 36.1
Potri.014G165000 Populus trichocarpa HOM05D004793 ORTHO05D004423 9.5e-07 57.4 127 37.0
Atru.chr6.3360 Acer truncatum HOM05D004793 ORTHO05D004423 1.6e-06 56.6 120 40.0
Ca_06456_v3 Cicer arietinum L. HOM05D004793 ORTHO05D004423 2.8e-06 55.8 114 39.5
Manes.15G062700 Manihot esculenta HOM05D004793 ORTHO05D004423 4.7e-06 55.1 117 43.6
Ciclev10017917m.g Citrus clementina HOM05D004793 ORTHO05D004423 6.2e-06 54.7 119 38.7
Medtr5g097300 Medicago truncatula HOM05D004793 ORTHO05D004423 6.2e-06 54.7 114 37.7
Cc02_g34950 Coffea canephora HOM05D004793 ORTHO05D004423 8.1e-06 54.3 127 33.9
ECA234G3783 Erigeron canadensis HOM05D004793 ORTHO05D004423 8.1e-06 54.3 159 33.3


User provided reference genes

Program Settings