Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g023830 Solanum pennellii HOM05D006836 ORTHO05D008691 6.9e-153 543.9 265 100.0
PGSC0003DMG400017381 Solanum tuberosum HOM05D006836 ORTHO05D008691 7.9e-149 530.4 265 97.0
Solyc07g045300.4 Solanum lycopersicum HOM05D006836 ORTHO05D008691 5.6e-147 524.2 265 97.4
Nitab4.5_0004852g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 1.7e-130 469.5 266 86.5
Nitab4.5_0005354g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 1.4e-116 423.3 266 80.8
Dinv21313 Davidia involucrata HOM05D006836 ORTHO05D008691 5.2e-116 421.4 255 78.4
Peaxi162Scf00612g00142 Petunia axillaris HOM05D006836 ORTHO05D008691 1.4e-113 413.3 266 77.1
Actinidia09801 Actinidia chinensis HOM05D006836 ORTHO05D008691 7.0e-113 411.0 257 76.3
Rhsim06G0178100 Rhododendron simsii HOM05D006836 ORTHO05D008691 2.0e-112 409.5 260 73.5
CSS0020520 Camellia sinensis var. sinensis HOM05D006836 ORTHO05D008691 7.7e-112 407.5 265 72.8
GSVIVG01030118001 Vitis vinifera HOM05D006836 ORTHO05D008691 4.2e-110 401.7 248 75.8
vmacro12068 Vaccinium macrocarpon HOM05D006836 ORTHO05D008691 3.6e-109 398.7 255 73.3
PSO675G1370 Papaver somniferum HOM05D006836 ORTHO05D008691 6.1e-109 397.9 257 71.2
Duzib133G0147 Durio zibethinus HOM05D006836 ORTHO05D008691 1.4e-108 396.7 265 71.3
TAR629G0496 Trochodendron aralioides HOM05D006836 ORTHO05D008691 1.4e-108 396.7 260 72.7
PSO541G5262 Papaver somniferum HOM05D006836 ORTHO05D008691 2.3e-108 396.0 257 70.4
Lalb_Chr10g0094621 Lupinus albus HOM05D006836 ORTHO05D008691 6.7e-108 394.4 248 73.4
DCAR_012739 Daucus carota HOM05D006836 ORTHO05D008691 1.5e-107 393.3 256 73.4
Glyma.13G010200 Glycine max HOM05D006836 ORTHO05D008691 4.4e-107 391.7 253 73.9
QL04p067653 Quercus lobata HOM05D006836 ORTHO05D008691 5.7e-107 391.3 250 73.2
Manes.13G060700 Manihot esculenta HOM05D006836 ORTHO05D008691 7.5e-107 391.0 262 71.0
Oeu037218.2 Olea europaea HOM05D000879 ORTHO05D008691 9.7e-107 390.6 241 75.1
Thecc.01G198300 Theobroma cacao HOM05D006836 ORTHO05D008691 9.7e-107 390.6 258 71.3
Phvul.L001691 Phaseolus vulgaris HOM05D006836 ORTHO05D008691 2.2e-106 389.4 253 72.7
MBI14_g24036_MAGBIO Magnolia biondii HOM05D006836 ORTHO05D008691 1.1e-105 387.1 233 76.4
CiPaw.03G283000 Carya illinoinensis HOM05D006836 ORTHO05D008691 1.4e-105 386.7 257 70.4
Ciclev10015848m.g Citrus clementina HOM05D006836 ORTHO05D008691 3.1e-105 385.6 238 76.1
VMungo0647G0281 Vigna mungo HOM05D006836 ORTHO05D008691 5.3e-105 384.8 253 72.3
ClCG02G009110 Citrullus lanatus HOM05D006836 ORTHO05D008691 7.0e-105 384.4 250 72.4
Glyma.20G060000 Glycine max HOM05D006836 ORTHO05D008691 7.0e-105 384.4 253 73.5
Gohir.A07G192900 Gossypium hirsutum HOM05D006836 ORTHO05D008691 5.9e-104 381.3 259 69.5
RcHm_v2.0_Chr2g0155731 Rosa chinensis HOM05D006836 ORTHO05D008691 5.9e-104 381.3 248 72.6
Gorai.001G223100 Gossypium raimondii HOM05D006836 ORTHO05D008691 1.7e-103 379.8 259 69.1
Sed0023251 Sechium edule HOM05D006836 ORTHO05D008691 2.2e-103 379.4 226 77.9
Migut.M00056 Erythranthe guttata HOM05D006836 ORTHO05D008691 2.9e-103 379.0 236 76.3
Lj6g0007987 Lotus japonicus HOM05D006836 ORTHO05D008691 3.8e-103 378.6 235 73.2
Gohir.D07G199300 Gossypium hirsutum HOM05D006836 ORTHO05D008691 5.0e-103 378.3 259 68.7
Nn1g07540 Nelumbo nucifera HOM05D006836 ORTHO05D008691 5.0e-103 378.3 255 71.4
Eucgr.K01397 Eucalyptus grandis HOM05D006836 ORTHO05D008691 8.5e-103 377.5 261 70.5
Potri.014G169200 Populus trichocarpa HOM05D006836 ORTHO05D008691 8.5e-103 377.5 258 70.2
Cfa014210 Carpinus fangiana HOM05D006836 ORTHO05D008691 1.9e-102 376.3 251 70.5
TPR.G16170 Trifolium pratense HOM05D006836 ORTHO05D008691 4.2e-102 375.2 255 69.4
MD09G1129600 Malus domestica HOM05D006836 ORTHO05D008691 4.7e-101 371.7 264 66.3
SGA_v2.0_scaffold73G24492 Striga asiatica HOM05D006836 ORTHO05D008691 8.0e-101 370.9 235 73.6
Ca_16339_v3 Cicer arietinum L. HOM05D006836 ORTHO05D008691 1.4e-100 370.2 257 68.9
CANSAT64G2876 Cannabis sativa HOM05D006836 ORTHO05D008691 2.3e-100 369.4 261 68.2
Zm00001eb176810 Zea mays HOM05D006836 ORTHO05D008691 2.3e-100 369.4 263 66.5
arahy.Tifrunner.gnm1.ann1.GSTV0Y Arachis hypogaea HOM05D006836 ORTHO05D008691 5.2e-100 368.2 266 66.5
arahy.Tifrunner.gnm1.ann1.M09JG2 Arachis hypogaea HOM05D006836 ORTHO05D008691 6.8e-100 367.9 266 66.2
MSTRG.14912 Avicennia marina HOM05D006836 ORTHO05D008691 8.8e-100 367.5 235 72.3
PGR031G1777 Punica granatum HOM05D006836 ORTHO05D008691 2.6e-99 365.9 248 70.6
Hund15463 Selenicereus undatus HOM05D006836 ORTHO05D008691 3.4e-99 365.5 246 72.0
Aqoxy1G03080 Aquilegia oxysepala HOM05D006836 ORTHO05D008691 1.3e-98 363.6 239 72.0
Psat5g104760 Pisum sativum HOM05D006836 ORTHO05D008691 4.8e-98 361.7 235 70.2
Medtr3g082680 Medicago truncatula HOM05D006836 ORTHO05D008691 3.1e-97 359.0 229 72.9
AUR62014994 Chenopodium quinoa HOM05D006836 ORTHO05D008691 5.4e-97 358.2 248 70.6
Os08g0345400 Oryza sativa ssp. japonica HOM05D006836 ORTHO05D008691 5.4e-97 358.2 238 68.1
Cc00_g01020 Coffea canephora HOM05D006836 ORTHO05D008691 1.2e-96 357.1 238 69.7
THA.LOC104808842 Tarenaya hassleriana HOM05D006836 ORTHO05D008691 2.7e-96 355.9 245 66.5
Haze_12601 Corylus avellana HOM05D006836 ORTHO05D008691 1.0e-95 354.0 281 63.7
BcaB06g26781 Brassica carinata HOM05D006836 ORTHO05D008691 5.0e-95 351.7 236 67.8
TWI75G1319 Tripterygium wilfordii HOM05D006836 ORTHO05D008691 8.6e-95 350.9 236 68.6
SEGI_40154 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 1.9e-94 349.7 245 65.7
Carub.0003s2604 Capsella rubella HOM05D006836 ORTHO05D008691 2.5e-94 349.4 235 67.7
AL3G42030 Arabidopsis lyrata HOM05D006836 ORTHO05D008691 4.2e-94 348.6 222 71.6
CARHR102220 Cardamine hirsuta HOM05D006836 ORTHO05D008691 4.2e-94 348.6 236 68.6
BcaC06g35865 Brassica carinata HOM05D006836 ORTHO05D008691 5.5e-94 348.2 237 67.9
C07p10290 Brassica napus HOM05D006836 ORTHO05D008691 5.5e-94 348.2 237 67.9
BolC7t41479H Brassica oleracea HOM05D006836 ORTHO05D008691 5.5e-94 348.2 237 67.9
Thhalv10002607m.g Eutrema salsugineum HOM05D006836 ORTHO05D008691 7.2e-94 347.8 235 68.5
BraA07t28465Z Brassica rapa HOM05D006836 ORTHO05D008691 4.7e-93 345.1 237 67.5
Ah.01g002500 Amaranthus hybridus HOM05D006836 ORTHO05D008691 1.0e-92 344.0 212 76.9
A07p06710 Brassica napus HOM05D006836 ORTHO05D008691 1.0e-92 344.0 237 67.5
Lsat_1_v5_gn_7_97361 Lactuca sativa HOM05D006836 ORTHO05D008691 1.8e-92 343.2 227 70.5
Sp3g23200 Schrenkiella parvula HOM05D006836 ORTHO05D008691 2.3e-92 342.8 235 66.8
EL10Ac9g22661 Beta vulgaris HOM05D006836 ORTHO05D008691 5.2e-92 341.7 251 66.1
ATR0751G245 Amborella trichopoda HOM05D006836 ORTHO05D008691 1.5e-91 340.1 221 69.7
Lj8A137G50 Lonicera japonica HOM05D006836 ORTHO05D008691 1.3e-90 337.0 209 76.1
Sabra14G0129000 Salix brachista HOM05D006836 ORTHO05D008691 9.2e-89 330.9 348 52.3
AUR62029127 Chenopodium quinoa HOM05D006836 ORTHO05D008691 1.0e-87 327.4 214 73.4
FvH4_6g40480 Fragaria vesca HOM05D006836 ORTHO05D008691 5.0e-87 325.1 197 74.6
COL.COLO4_19642 Corchorus olitorius HOM05D006836 ORTHO05D008691 9.5e-86 320.9 258 63.2
HanXRQChr11g0329431 Helianthus annuus HOM05D006836 ORTHO05D008691 4.0e-84 315.5 216 68.1
CsaV3_6G009720 Cucumis sativus L. HOM05D006836 ORTHO05D008691 8.9e-84 314.3 237 66.2
FAN10G4054 Fragaria x ananassa HOM05D006836 ORTHO05D008691 8.9e-84 314.3 263 59.7
FAN14G0130 Fragaria x ananassa HOM05D006836 ORTHO05D008691 8.9e-84 314.3 263 59.7
ECA236G0162 Erigeron canadensis HOM05D006836 ORTHO05D008691 2.0e-83 313.2 199 73.4
unitig_62.g23534 Utricularia gibba HOM05D000211 ORTHO05D002682 1.1e-78 297.4 233 62.2
CDE10G1136 Ceratophyllum demersum HOM05D006836 ORTHO05D008691 5.8e-75 285.0 174 71.3
Pp3c23_16310 Physcomitrium patens HOM05D006836 ORTHO05D008691 2.3e-71 273.1 258 49.6
AagrBONN_evm.TU.Sc2ySwM_117.1494 Anthoceros agrestis HOM05D006836 ORTHO05D008691 1.1e-70 270.8 223 55.6
MELO3C025942.2 Cucumis melo HOM05D006836 ORTHO05D008691 7.3e-70 268.1 188 71.8
Mapoly0098s0007 Marchantia polymorpha HOM05D006836 ORTHO05D008691 2.0e-67 260.0 240 51.2
Cpa.g.sc136.39 Carica papaya HOM05D006836 ORTHO05D008691 3.7e-66 255.8 264 52.7
Sc21g0000470 Simmondsia chinensis HOM05D006836 ORTHO05D008691 1.9e-65 253.4 170 70.0
AT2G04360 Arabidopsis thaliana HOM05D006836 ORTHO05D008691 5.4e-65 251.9 181 65.7
MD07G1016400 Malus domestica HOM05D006836 ORTHO05D008691 1.2e-64 250.8 228 54.8
MD17G1118400 Malus domestica HOM05D006836 ORTHO05D008691 1.2e-64 250.8 228 54.8
SMO270G0068 Selaginella moellendorffii HOM05D006836 ORTHO05D008691 6.0e-64 248.4 222 51.4
Aa31sc202G50 Aethionema arabicum HOM05D006836 ORTHO05D008691 1.2e-61 240.7 198 60.1
FAN02G3194 Fragaria x ananassa HOM05D006836 ORTHO05D008691 4.4e-59 232.3 142 75.4
Prupe.3G195700 Prunus persica HOM05D006836 ORTHO05D008691 1.6e-56 223.8 154 71.4
Haze_12612 Corylus avellana HOM05D006836 ORTHO05D008691 1.4e-52 210.7 144 70.8
Cre05.g234750 Chlamydomonas reinhardtii HOM05D006836 ORTHO05D008691 5.4e-49 198.7 233 43.3
CBR_g3513 Chara braunii HOM05D006836 ORTHO05D000407 4.5e-43 179.1 215 42.3
FAN05G5431 Fragaria x ananassa HOM05D006836 ORTHO05D008691 2.1e-37 160.2 108 66.7
FAN09G0369 Fragaria x ananassa HOM05D006836 ORTHO05D008691 4.0e-36 156.0 108 65.7
HPP92_003030 Vanilla planifolia HOM05D006836 ORTHO05D008691 3.2e-33 146.4 103 66.0
SEGI_21977 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 5.1e-31 139.0 98 67.3
HPP92_003031 Vanilla planifolia HOM05D006836 ORTHO05D008691 4.3e-30 136.0 97 59.8
PRCOL_00003549 Prasinoderma coloniale HOM05D006836 ORTHO05D008691 7.4e-22 108.6 167 41.3
Haze_12595 Corylus avellana HOM05D006836 ORTHO05D008691 1.1e-12 78.2 50 70.0
MCO08G347 Micromonas commoda HOM05D006836 ORTHO05D008691 4.1e-12 76.3 226 30.1
Solyc07g045280.3 Solanum lycopersicum HOM05D006836 ORTHO05D008691 7.7e-11 72.0 32 93.8
arahy.Tifrunner.gnm1.ann1.FY93PX Arachis hypogaea HOM05D006836 ORTHO05D000230 2.2e-10 70.5 47 68.1
Mapoly0098s0053 Marchantia polymorpha HOM05D001007 ORTHO05D008005 6.1e-08 62.4 105 35.2
Hma1.2p1_0599F.1_g187040 Hydrangea macrophylla HOM05D006836 ORTHO05D008691 3.9e-07 59.7 46 65.2
Oeu037216.1 Olea europaea HOM05D006836 ORTHO05D049434 3.3e-06 56.6 38 57.9
Oeu037217.1 Olea europaea HOM05D006836 ORTHO05D049434 3.3e-06 56.6 38 57.9


User provided reference genes

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