Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g022630 Solanum pennellii HOM05D006473 ORTHO05D008108 4.4e-95 351.3 178 100.0
Solyc07g043070.3 Solanum lycopersicum HOM05D006473 ORTHO05D008108 1.7e-94 349.4 178 99.4
PGSC0003DMG400013558 Solanum tuberosum HOM05D006473 ORTHO05D008108 2.0e-79 299.3 178 86.5
Peaxi162Scf00393g01011 Petunia axillaris HOM05D006473 ORTHO05D008108 1.8e-64 249.6 182 73.6
Nitab4.5_0011512g0010 Nicotiana tabacum HOM05D006473 ORTHO05D008108 6.6e-59 231.1 182 70.9
CAN.G529.20 Capsicum annuum HOM05D006473 ORTHO05D008108 6.4e-54 214.5 161 71.4
Nitab4.5_0002292g0030 Nicotiana tabacum HOM05D006473 ORTHO05D008108 9.6e-50 200.7 178 61.8
Nitab4.5_0000170g0320 Nicotiana tabacum HOM05D006473 ORTHO05D008108 2.1e-44 183.0 140 69.3
Peaxi162Scf00322g00416 Petunia axillaris HOM05D006473 ORTHO05D008108 3.0e-43 179.1 172 61.0
Cc00_g04870 Coffea canephora HOM05D006473 ORTHO05D008108 3.3e-34 149.1 155 56.8
Migut.H01260 Erythranthe guttata HOM05D006473 ORTHO05D008108 1.3e-30 137.1 150 50.7
SGA_v2.0_scaffold49G18372 Striga asiatica HOM05D006473 ORTHO05D008108 6.7e-27 124.8 138 51.4
Oeu027256.1 Olea europaea HOM05D006473 ORTHO05D008108 9.7e-26 120.9 114 56.1
CSS0026100 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 2.2e-22 109.8 179 41.3
CSS0046570 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 2.2e-22 109.8 179 41.3
EL10Ac6g15336 Beta vulgaris HOM05D006473 ORTHO05D008108 8.5e-22 107.8 143 46.2
MELO3C026363.2 Cucumis melo HOM05D006473 ORTHO05D008108 4.2e-21 105.5 156 44.2
CiPaw.03G109100 Carya illinoinensis HOM05D006473 ORTHO05D008108 9.4e-21 104.4 150 46.7
ClCG11G016910 Citrullus lanatus HOM05D006473 ORTHO05D008108 2.7e-20 102.8 159 40.9
CsaV3_4G032520 Cucumis sativus L. HOM05D006473 ORTHO05D008108 3.6e-20 102.4 161 41.6
Thecc.01G174700 Theobroma cacao HOM05D006473 ORTHO05D008108 1.0e-19 100.9 152 43.4
TAR626G1015 Trochodendron aralioides HOM05D006473 ORTHO05D008108 1.0e-19 100.9 141 44.0
TAR626G1390 Trochodendron aralioides HOM05D006473 ORTHO05D008108 1.4e-19 100.5 141 44.7
Gohir.A11G155300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 3.0e-19 99.4 174 40.8
Gorai.007G172600 Gossypium raimondii HOM05D006473 ORTHO05D008108 3.0e-19 99.4 174 41.4
Haze_13544 Corylus avellana HOM05D006473 ORTHO05D008108 5.1e-19 98.6 144 45.1
FAN05G1961 Fragaria x ananassa HOM05D006473 ORTHO05D008108 5.1e-19 98.6 168 42.9
Gohir.D11G162300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 5.1e-19 98.6 179 40.8
Sed0014549 Sechium edule HOM05D006473 ORTHO05D008108 5.1e-19 98.6 168 39.9
Duzib138G0874 Durio zibethinus HOM05D006473 ORTHO05D008108 6.7e-19 98.2 155 43.9
Cfa023365 Carpinus fangiana HOM05D006473 ORTHO05D008108 8.8e-19 97.8 144 45.8
FvH4_6g39300 Fragaria vesca HOM05D006473 ORTHO05D008108 1.1e-18 97.4 161 42.2
RcHm_v2.0_Chr2g0153221 Rosa chinensis HOM05D006473 ORTHO05D008108 1.1e-18 97.4 167 42.5
Lsat_1_v5_gn_1_29560 Lactuca sativa HOM05D006473 ORTHO05D008108 1.5e-18 97.1 175 39.4
Nn7g38339 Nelumbo nucifera HOM05D006473 ORTHO05D008108 1.5e-18 97.1 142 43.0
Potri.006G008000 Populus trichocarpa HOM05D006473 ORTHO05D008108 1.5e-18 97.1 169 42.6
CANSAT64G1482 Cannabis sativa HOM05D006473 ORTHO05D008108 2.0e-18 96.7 174 39.7
Hund04387 Selenicereus undatus HOM05D006473 ORTHO05D008108 2.0e-18 96.7 143 43.4
Ciclev10012907m.g Citrus clementina HOM05D006473 ORTHO05D008108 3.3e-18 95.9 140 45.7
Aqoxy5G02466 Aquilegia oxysepala HOM05D006473 ORTHO05D008108 7.4e-18 94.7 142 45.1
CiPaw.04G072200 Carya illinoinensis HOM05D006473 ORTHO05D008108 7.4e-18 94.7 149 46.3
Sabra06G0006200 Salix brachista HOM05D006473 ORTHO05D008108 7.4e-18 94.7 153 43.8
Sed0027280 Sechium edule HOM05D006473 ORTHO05D008108 7.4e-18 94.7 149 39.6
FAN09G0937 Fragaria x ananassa HOM05D006473 ORTHO05D008108 9.7e-18 94.4 171 42.7
FAN14G2613 Fragaria x ananassa HOM05D006473 ORTHO05D008108 9.7e-18 94.4 171 42.7
Medtr3g082070 Medicago truncatula HOM05D006473 ORTHO05D008108 9.7e-18 94.4 143 44.1
QL10p019398 Quercus lobata HOM05D006473 ORTHO05D008108 9.7e-18 94.4 173 39.9
MD09G1143500 Malus domestica HOM05D006473 ORTHO05D008108 1.3e-17 94.0 166 41.0
DCAR_029496 Daucus carota HOM05D006473 ORTHO05D008108 2.8e-17 92.8 171 40.9
Hund23023 Selenicereus undatus HOM05D006473 ORTHO05D008108 2.8e-17 92.8 145 40.7
TWI34G1686 Tripterygium wilfordii HOM05D006473 ORTHO05D008108 3.7e-17 92.4 143 44.1
Lj6g0005292 Lotus japonicus HOM05D006473 ORTHO05D008108 6.3e-17 91.7 144 42.4
Psat5g106240 Pisum sativum HOM05D006473 ORTHO05D008108 6.3e-17 91.7 158 40.5
MD17G1129800 Malus domestica HOM05D006473 ORTHO05D008108 8.2e-17 91.3 172 40.1
vmacro08765 Vaccinium macrocarpon HOM05D006473 ORTHO05D008108 8.2e-17 91.3 159 40.3
BraA05t20604Z Brassica rapa HOM05D006473 ORTHO05D008108 1.1e-16 90.9 154 40.9
Carub.0007s2685 Capsella rubella HOM05D006473 ORTHO05D008108 1.1e-16 90.9 151 40.4
PSO675G8005 Papaver somniferum HOM05D006473 ORTHO05D008108 1.1e-16 90.9 169 42.6
ECA247G3587 Erigeron canadensis HOM05D006473 ORTHO05D008108 1.4e-16 90.5 165 41.2
AT4G15140 Arabidopsis thaliana HOM05D006473 ORTHO05D008108 1.8e-16 90.1 151 38.4
Glyma.13G004200 Glycine max HOM05D006473 ORTHO05D008108 1.8e-16 90.1 146 43.2
QL07p025679 Quercus lobata HOM05D006473 ORTHO05D008108 1.8e-16 90.1 172 37.8
COL.COLO4_19989 Corchorus olitorius HOM05D006473 ORTHO05D008108 2.4e-16 89.7 146 39.7
Glyma.20G063000 Glycine max HOM05D006473 ORTHO05D008108 2.4e-16 89.7 146 42.5
Atru.chr8.1011 Acer truncatum HOM05D006473 ORTHO05D008108 3.1e-16 89.4 136 44.1
TPR.G17559 Trifolium pratense HOM05D006473 ORTHO05D008108 3.1e-16 89.4 146 41.8
A05p16970 Brassica napus HOM05D006473 ORTHO05D008108 4.1e-16 89.0 154 40.9
C06p16570 Brassica napus HOM05D006473 ORTHO05D008108 5.3e-16 88.6 155 41.3
BolC6t36859H Brassica oleracea HOM05D006473 ORTHO05D008108 5.3e-16 88.6 155 41.3
PGR031G0759 Punica granatum HOM05D006473 ORTHO05D008108 5.3e-16 88.6 149 40.9
BcaC08g44251 Brassica carinata HOM05D006473 ORTHO05D008108 6.9e-16 88.2 155 41.3
CARHR221880 Cardamine hirsuta HOM05D006473 ORTHO05D008108 6.9e-16 88.2 155 40.0
Prupe.3G184300 Prunus persica HOM05D006473 ORTHO05D008108 9.1e-16 87.8 156 41.0
VMungo0540G0033 Vigna mungo HOM05D006473 ORTHO05D008108 9.1e-16 87.8 143 41.3
Sc07g0001930 Simmondsia chinensis HOM05D006473 ORTHO05D008108 1.2e-15 87.4 150 42.7
Lalb_Chr17g0337141 Lupinus albus HOM05D006473 ORTHO05D008108 1.5e-15 87.0 149 39.6
Sp7g13370 Schrenkiella parvula HOM05D006473 ORTHO05D008108 1.5e-15 87.0 171 37.4
BcaB02g07838 Brassica carinata HOM05D006473 ORTHO05D008108 2.0e-15 86.7 164 37.2
BcaC07g37876 Brassica carinata HOM05D006473 ORTHO05D008108 2.6e-15 86.3 171 37.4
BolC8t48269H Brassica oleracea HOM05D006473 ORTHO05D008108 2.6e-15 86.3 171 37.4
Phvul.007G120134 Phaseolus vulgaris HOM05D006473 ORTHO05D008108 2.6e-15 86.3 143 41.3
COL.COLO4_18222 Corchorus olitorius HOM05D006473 ORTHO05D008108 4.5e-15 85.5 148 38.5
GSVIVG01015888001 Vitis vinifera HOM05D006473 ORTHO05D008108 4.5e-15 85.5 145 44.1
QL07p026949 Quercus lobata HOM05D006473 ORTHO05D008108 1.0e-14 84.3 172 37.2
Aa31LG9G2250 Aethionema arabicum HOM05D006473 ORTHO05D008108 1.3e-14 84.0 158 38.6
A08p11670 Brassica napus HOM05D006473 ORTHO05D008108 1.3e-14 84.0 171 36.8
BraA08t33161Z Brassica rapa HOM05D006473 ORTHO05D008108 1.3e-14 84.0 171 36.8
AL7G40560 Arabidopsis lyrata HOM05D006473 ORTHO05D008108 2.9e-14 82.8 151 37.1
arahy.Tifrunner.gnm1.ann1.ITU10B Arachis hypogaea HOM05D006473 ORTHO05D008108 3.8e-14 82.4 149 38.9
Ca_16320_v3 Cicer arietinum L. HOM05D006473 ORTHO05D008108 3.8e-14 82.4 134 41.0
Eucgr.A00949 Eucalyptus grandis HOM05D006473 ORTHO05D008108 3.8e-14 82.4 145 42.8
QL07p027003 Quercus lobata HOM05D006473 ORTHO05D008108 3.8e-14 82.4 182 37.4
Sabra16G0000300 Salix brachista HOM05D006473 ORTHO05D008108 3.8e-14 82.4 177 39.5
arahy.Tifrunner.gnm1.ann1.UN21ID Arachis hypogaea HOM05D006473 ORTHO05D008108 5.0e-14 82.0 149 36.2
Cpa.g.sc8.265 Carica papaya HOM05D006473 ORTHO05D008108 5.0e-14 82.0 152 38.8
Actinidia12507 Actinidia chinensis HOM05D006473 ORTHO05D008108 6.5e-14 81.6 167 35.9
Nitab4.5_0000019g0110 Nicotiana tabacum HOM05D006473 ORTHO05D008108 2.5e-13 79.7 105 46.7
Rhsim12G0015400 Rhododendron simsii HOM05D006473 ORTHO05D008108 2.5e-13 79.7 140 41.4
BcaB04g18284 Brassica carinata HOM05D006473 ORTHO05D008108 3.2e-13 79.3 165 38.8
Manes.08G068100 Manihot esculenta HOM05D006473 ORTHO05D008108 3.2e-13 79.3 166 35.5
Thhalv10027487m.g Eutrema salsugineum HOM05D006473 ORTHO05D008108 9.4e-13 77.8 158 36.1
HanXRQChr02g0035171 Helianthus annuus HOM05D006473 ORTHO05D008108 2.1e-12 76.6 161 40.4
THA.LOC104808506 Tarenaya hassleriana HOM05D006473 ORTHO05D008108 2.7e-12 76.3 161 39.8
Actinidia32074 Actinidia chinensis HOM05D006473 ORTHO05D008108 3.6e-12 75.9 197 33.0
CDE05G3197 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 3.6e-12 75.9 155 35.5
Haze_13545 Corylus avellana HOM05D006473 ORTHO05D008108 2.3e-11 73.2 109 47.7
QL07p026979 Quercus lobata HOM05D006473 ORTHO05D008108 1.1e-10 70.9 92 47.8
Dinv40839 Davidia involucrata HOM05D006473 ORTHO05D008108 2.6e-10 69.7 81 51.9
QL09p045725 Quercus lobata HOM05D006473 ORTHO05D008108 3.3e-10 69.3 91 45.1
CDE11G0296 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 4.4e-10 68.9 100 48.0
ATR0763G071 Amborella trichopoda HOM05D006473 ORTHO05D008108 9.7e-10 67.8 146 37.7
MBI02_g01129_MAGBIO Magnolia biondii HOM05D006464 ORTHO05D007923 1.3e-09 67.4 41 70.7
unitig_62.g23243 Utricularia gibba HOM05D006473 ORTHO05D008108 3.7e-09 65.9 100 40.0
HPP92_016064 Vanilla planifolia HOM05D006473 ORTHO05D008108 3.7e-09 65.9 60 55.0
AUR62017858 Chenopodium quinoa HOM05D006473 ORTHO05D008108 6.3e-09 65.1 132 35.6
QL04p064817 Quercus lobata HOM05D006473 ORTHO05D008108 8.2e-09 64.7 143 39.2
Oeu036758.1 Olea europaea HOM05D006473 ORTHO05D008108 1.4e-08 63.9 156 31.4
Os04g0504200 Oryza sativa ssp. japonica HOM05D006473 ORTHO05D008108 7.0e-08 61.6 149 32.2
Zm00001eb078060 Zea mays HOM05D006473 ORTHO05D008108 2.0e-07 60.1 150 32.0
QL04p064939 Quercus lobata HOM05D006473 ORTHO05D008108 5.9e-07 58.5 145 38.6
Cpa.g.sc32.52 Carica papaya HOM05D006473 ORTHO05D008108 1.3e-06 57.4 140 36.4


User provided reference genes

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