Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g020710 Solanum pennellii HOM05D005129 ORTHO05D005585 2.2e-204 716.1 563 100.0
Sopen02g006450 Solanum pennellii HOM05D005129 ORTHO05D005585 1.9e-123 447.2 553 67.1
CAN.G39.32 Capsicum annuum HOM05D005129 ORTHO05D000007 2.7e-122 443.4 553 65.5
Solyc02g022870.4 Solanum lycopersicum HOM05D005129 ORTHO05D005585 1.1e-107 394.8 532 63.5
Nitab4.5_0000076g0130 Nicotiana tabacum HOM05D005129 ORTHO05D005585 4.9e-100 369.4 553 61.1
Peaxi162Scf01909g00118 Petunia axillaris HOM05D005129 ORTHO05D005585 3.1e-94 350.1 548 50.2
Nitab4.5_0002094g0030 Nicotiana tabacum HOM05D005129 ORTHO05D005585 1.0e-84 318.5 553 65.6
Solyc07g041330.3 Solanum lycopersicum HOM05D005129 ORTHO05D005585 3.6e-26 124.0 70 84.3
Lj1C1160T1 Lonicera japonica HOM05D005129 ORTHO05D005585 1.3e-23 115.5 119 51.3
Dinv27169 Davidia involucrata HOM05D005129 ORTHO05D005585 1.2e-18 99.0 119 47.1
Cfa000799 Carpinus fangiana HOM05D005129 ORTHO05D005585 6.8e-17 93.2 122 45.1
Haze_05902 Corylus avellana HOM05D005129 ORTHO05D005585 8.9e-17 92.8 122 45.1
TAR633G2434 Trochodendron aralioides HOM05D005129 ORTHO05D005585 2.6e-16 91.3 280 29.6
HanXRQChr03g0080681 Helianthus annuus HOM05D005129 ORTHO05D005585 3.4e-16 90.9 118 44.9
Nn1g08322 Nelumbo nucifera HOM05D005129 ORTHO05D005585 8.4e-15 86.3 126 39.7
Manes.06G058900 Manihot esculenta HOM05D005129 ORTHO05D005585 1.4e-14 85.5 117 44.4
QL05p063822 Quercus lobata HOM05D005129 ORTHO05D005585 1.4e-14 85.5 117 43.6
Eucgr.D00092 Eucalyptus grandis HOM05D005129 ORTHO05D005585 7.1e-14 83.2 125 42.4
Lsat_1_v5_gn_3_43520 Lactuca sativa HOM05D005129 ORTHO05D005585 7.1e-14 83.2 291 27.1
Sed0027997 Sechium edule HOM05D005129 ORTHO05D005585 3.5e-13 80.9 97 46.4
AUR62005921 Chenopodium quinoa HOM05D005129 ORTHO05D005585 7.8e-13 79.7 278 27.0
Rhsim13G0123000 Rhododendron simsii HOM05D005129 ORTHO05D005585 7.8e-13 79.7 101 45.5
AUR62028142 Chenopodium quinoa HOM05D005129 ORTHO05D005585 1.0e-12 79.3 278 29.5
EL10Ac3g05106 Beta vulgaris HOM05D005129 ORTHO05D005585 1.7e-12 78.6 227 37.4
GSVIVG01035592001 Vitis vinifera HOM05D005129 ORTHO05D005585 1.7e-12 78.6 94 45.7
Hund21086 Selenicereus undatus HOM05D005129 ORTHO05D005585 3.0e-12 77.8 155 33.5
RcHm_v2.0_Chr5g0017511 Rosa chinensis HOM05D005129 ORTHO05D005585 3.9e-12 77.4 123 39.8
CANSAT35G1118 Cannabis sativa HOM05D005129 ORTHO05D005585 5.1e-12 77.0 123 43.1
ClCG03G008270 Citrullus lanatus HOM05D005129 ORTHO05D005585 6.6e-12 76.6 281 42.3
ECA246G0263 Erigeron canadensis HOM05D005129 ORTHO05D005585 6.6e-12 76.6 118 39.0
Atru.chr3.3028 Acer truncatum HOM05D005129 ORTHO05D005585 8.6e-12 76.3 117 42.7
FAN21G1521 Fragaria x ananassa HOM05D005129 ORTHO05D005585 8.6e-12 76.3 122 41.8
TWI63G1468 Tripterygium wilfordii HOM05D005129 ORTHO05D005585 8.6e-12 76.3 116 40.5
MELO3C002837.2 Cucumis melo HOM05D005129 ORTHO05D005585 1.1e-11 75.9 98 44.9
CsaV3_1G037120 Cucumis sativus L. HOM05D005129 ORTHO05D005585 1.5e-11 75.5 119 42.0
Thecc.06G015200 Theobroma cacao HOM05D005129 ORTHO05D005585 1.5e-11 75.5 115 43.5
TAR626G1389 Trochodendron aralioides HOM05D005129 ORTHO05D005585 1.5e-11 75.5 102 43.1
FAN11G1468 Fragaria x ananassa HOM05D005129 ORTHO05D005585 1.9e-11 75.1 122 41.0
Psat1g165880 Pisum sativum HOM05D005129 ORTHO05D005585 1.9e-11 75.1 111 43.2
Potri.001G463700 Populus trichocarpa HOM05D005129 ORTHO05D005585 2.5e-11 74.7 125 39.2
Ciclev10014031m.g Citrus clementina HOM05D005129 ORTHO05D005585 3.3e-11 74.3 101 44.6
PSO541G3520 Papaver somniferum HOM05D005129 ORTHO05D005585 5.6e-11 73.6 124 35.5
Sc19g0000270 Simmondsia chinensis HOM05D005129 ORTHO05D005585 5.6e-11 73.6 98 40.8
Gohir.A10G007300 Gossypium hirsutum HOM05D005129 ORTHO05D005585 9.6e-11 72.8 115 44.3
PSO675G1291 Papaver somniferum HOM05D005129 ORTHO05D005585 1.2e-10 72.4 124 37.1
Rhsim06G0213800 Rhododendron simsii HOM05D005129 ORTHO05D005585 1.2e-10 72.4 126 38.9
Gorai.011G007900 Gossypium raimondii HOM05D005129 ORTHO05D005585 2.1e-10 71.6 114 45.6
FAN16G1113 Fragaria x ananassa HOM05D005129 ORTHO05D005585 2.8e-10 71.2 231 41.6
Gohir.D10G007200 Gossypium hirsutum HOM05D005129 ORTHO05D005585 2.8e-10 71.2 115 44.3
Gohir.D05G113400 Gossypium hirsutum HOM05D005129 ORTHO05D005585 3.6e-10 70.9 120 40.0
FAN25G2195 Fragaria x ananassa HOM05D005129 ORTHO05D005585 4.7e-10 70.5 122 39.3
Cpa.g.sc166.48 Carica papaya HOM05D005129 ORTHO05D005585 6.2e-10 70.1 121 38.8
arahy.Tifrunner.gnm1.ann1.LUZ6WJ Arachis hypogaea HOM05D005129 ORTHO05D005585 1.1e-09 69.3 320 35.0
Gohir.A05G112850 Gossypium hirsutum HOM05D005129 ORTHO05D005585 1.1e-09 69.3 115 40.9
Potri.011G161901 Populus trichocarpa HOM05D005129 ORTHO05D005585 1.1e-09 69.3 139 37.4
CDE06G2236 Ceratophyllum demersum HOM05D005129 ORTHO05D005585 1.8e-09 68.6 99 42.4
arahy.Tifrunner.gnm1.ann1.40GDTE Arachis hypogaea HOM05D005129 ORTHO05D005585 2.4e-09 68.2 324 33.0
PSO541G6300 Papaver somniferum HOM05D005129 ORTHO05D005585 3.1e-09 67.8 100 39.0
Ah.13g071200 Amaranthus hybridus HOM05D005129 ORTHO05D005585 4.0e-09 67.4 126 33.3
Gorai.009G117400 Gossypium raimondii HOM05D005129 ORTHO05D005585 5.2e-09 67.0 115 40.0
MD10G1247500 Malus domestica HOM05D005129 ORTHO05D005585 2.0e-08 65.1 121 33.9
SGA_v2.0_scaffold333G49012 Striga asiatica HOM05D005129 ORTHO05D005585 3.4e-08 64.3 122 34.4
MD05G1268800 Malus domestica HOM05D005129 ORTHO05D005585 5.8e-08 63.5 121 34.7
SalBow8G1057 Salvia bowleyana HOM05D005129 ORTHO05D005585 7.6e-08 63.2 114 36.0
Sabra11G0141700 Salix brachista HOM05D005129 ORTHO05D005585 1.7e-07 62.0 103 39.8
TPR.G125 Trifolium pratense HOM05D005129 ORTHO05D005585 1.7e-07 62.0 88 40.9
vmacro03361 Vaccinium macrocarpon HOM05D005129 ORTHO05D005585 1.7e-07 62.0 126 34.9
Dinv27170 Davidia involucrata HOM05D005129 ORTHO05D005585 3.8e-07 60.8 331 23.9
Lalb_Chr15g0088861 Lupinus albus HOM05D005129 ORTHO05D005585 3.8e-07 60.8 339 29.8
Prupe.4G095800 Prunus persica HOM05D005129 ORTHO05D005585 3.8e-07 60.8 122 36.9
Lalb_Chr04g0249051 Lupinus albus HOM05D005129 ORTHO05D005585 8.4e-07 59.7 89 40.4
PSO541G4161 Papaver somniferum HOM05D026995 ORTHO05D005585 1.9e-06 58.5 100 36.0
PGR083G2529 Punica granatum HOM05D005129 ORTHO05D005585 7.1e-06 56.6 213 34.7
Carub.0004s1646 Capsella rubella HOM05D005129 ORTHO05D005585 9.3e-06 56.2 128 33.6


User provided reference genes

Program Settings