Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g018730 Solanum pennellii HOM05D002237 ORTHO05D002213 5.6e-83 311.2 197 100.0
PGSC0003DMG400017835 Solanum tuberosum HOM05D002237 ORTHO05D002213 1.9e-59 233.0 203 75.9
Solyc07g039380.3 Solanum lycopersicum HOM05D002237 ORTHO05D002213 1.3e-55 220.3 197 77.7
Nitab4.5_0006570g0030 Nicotiana tabacum HOM05D002237 ORTHO05D002213 3.3e-27 125.9 257 45.5
Peaxi162Scf00259g00111 Petunia axillaris HOM05D002237 ORTHO05D002213 5.0e-23 112.1 240 49.2
Nitab4.5_0000095g0170 Nicotiana tabacum HOM05D002237 ORTHO05D002213 1.6e-21 107.1 235 41.3
Nitab4.5_0003648g0010 Nicotiana tabacum HOM05D002237 ORTHO05D002213 3.9e-20 102.4 238 40.8
Peaxi162Scf01461g00029 Petunia axillaris HOM05D002237 ORTHO05D002213 1.1e-19 100.9 231 41.6
PGSC0003DMG400021389 Solanum tuberosum HOM05D002237 ORTHO05D002213 2.4e-17 93.2 213 42.7
Dinv36772 Davidia involucrata HOM05D002237 ORTHO05D002213 9.1e-17 91.3 200 35.0
Solyc05g018820.1 Solanum lycopersicum HOM05D002237 ORTHO05D002213 1.0e-15 87.8 206 37.4
Sopen05g016140 Solanum pennellii HOM05D002237 ORTHO05D002213 1.3e-15 87.4 208 36.5
Oeu041234.1 Olea europaea HOM05D002237 ORTHO05D002213 1.1e-14 84.3 217 33.2
MSTRG.6063 Avicennia marina HOM05D002237 ORTHO05D002213 2.6e-11 73.2 203 31.0
MSTRG.19510 Avicennia marina HOM05D002237 ORTHO05D002213 2.8e-10 69.7 203 31.0
Oeu041233.1 Olea europaea HOM05D002237 ORTHO05D002213 2.8e-10 69.7 189 31.7
Oeu041232.1 Olea europaea HOM05D002237 ORTHO05D002213 3.7e-10 69.3 197 31.5
Hma1.2p1_0798F.1_g219880 Hydrangea macrophylla HOM05D002237 ORTHO05D002213 4.1e-09 65.9 190 33.2
Oeu041231.1 Olea europaea HOM05D002237 ORTHO05D002213 4.1e-09 65.9 209 31.6
Actinidia25249 Actinidia chinensis HOM05D002237 ORTHO05D002213 1.2e-08 64.3 246 29.7
CSS0026514 Camellia sinensis var. sinensis HOM05D002237 ORTHO05D002213 2.6e-08 63.2 204 28.4
ECA240G0667 Erigeron canadensis HOM05D002237 ORTHO05D002213 3.5e-08 62.8 60 56.7
A09p47750 Brassica napus HOM05D002237 ORTHO05D002213 4.5e-08 62.4 253 33.6
BraA09t40233Z Brassica rapa HOM05D002237 ORTHO05D002213 5.9e-08 62.0 254 33.5
AL4G18280 Arabidopsis lyrata HOM05D002237 ORTHO05D002213 1.0e-07 61.2 249 25.7
Cc06_g11460 Coffea canephora HOM05D002237 ORTHO05D002213 1.3e-07 60.8 221 32.1
vmacro17244 Vaccinium macrocarpon HOM05D002237 ORTHO05D002213 1.7e-07 60.5 265 37.4
CiPaw.03G215600 Carya illinoinensis HOM05D002237 ORTHO05D002213 2.2e-07 60.1 212 27.4
THA.LOC104803792 Tarenaya hassleriana HOM05D002237 ORTHO05D002213 2.2e-07 60.1 123 31.7
CARHR114840 Cardamine hirsuta HOM05D002237 ORTHO05D002213 2.9e-07 59.7 249 26.1
Actinidia26073 Actinidia chinensis HOM05D002237 ORTHO05D002213 3.8e-07 59.3 236 28.0
AT2G26110 Arabidopsis thaliana HOM05D002237 ORTHO05D002213 3.8e-07 59.3 256 25.8
Nn8g38853 Nelumbo nucifera HOM05D002237 ORTHO05D002213 3.8e-07 59.3 224 28.1
THA.LOC104803728 Tarenaya hassleriana HOM05D002237 ORTHO05D002213 3.8e-07 59.3 68 45.6
Aa31LG5G9660 Aethionema arabicum HOM05D002237 ORTHO05D002213 5.0e-07 58.9 64 50.0
BcaC07g39780 Brassica carinata HOM05D002237 ORTHO05D002213 5.0e-07 58.9 245 38.0
C08p29980 Brassica napus HOM05D002237 ORTHO05D002213 5.0e-07 58.9 245 38.0
BolC8t50607H Brassica oleracea HOM05D002237 ORTHO05D002213 5.0e-07 58.9 245 38.0
COL.COLO4_21062 Corchorus olitorius HOM05D002237 ORTHO05D002213 6.5e-07 58.5 194 26.8
DCAR_030907 Daucus carota HOM05D002237 ORTHO05D002213 6.5e-07 58.5 197 27.9
Rhsim05G0020400 Rhododendron simsii HOM05D002237 ORTHO05D002213 6.5e-07 58.5 267 31.8
Carub.0004s0595 Capsella rubella HOM05D002237 ORTHO05D002213 8.5e-07 58.2 80 41.2
Cpa.g.sc7.182 Carica papaya HOM05D002237 ORTHO05D002213 1.1e-06 57.8 85 42.4
Thhalv10002336m.g Eutrema salsugineum HOM05D002237 ORTHO05D002213 1.1e-06 57.8 255 26.7
HanXRQChr03g0060491 Helianthus annuus HOM05D002237 ORTHO05D002213 1.1e-06 57.8 269 24.9
Hma1.2p1_0482F.1_g162400 Hydrangea macrophylla HOM05D002237 ORTHO05D002213 1.1e-06 57.8 250 26.4
Sp4g05990 Schrenkiella parvula HOM05D002237 ORTHO05D002213 1.5e-06 57.4 249 24.9
SGA_v2.0_scaffold62G21613 Striga asiatica HOM05D002237 ORTHO05D002213 1.5e-06 57.4 67 43.3
BcaB01g00157 Brassica carinata HOM05D002237 ORTHO05D002213 1.9e-06 57.0 68 38.2
Actinidia39713 Actinidia chinensis HOM05D002237 ORTHO05D002213 2.5e-06 56.6 79 44.3
Oeu041228.1 Olea europaea HOM05D002237 ORTHO05D002213 4.2e-06 55.8 195 27.2
Lsat_1_v5_gn_7_37001 Lactuca sativa HOM05D002237 ORTHO05D002213 5.5e-06 55.5 59 52.5
Ciclev10008860m.g Citrus clementina HOM05D002237 ORTHO05D002213 7.2e-06 55.1 85 38.8
Dinv27989 Davidia involucrata HOM05D002237 ORTHO05D002213 9.4e-06 54.7 245 26.1


User provided reference genes

Program Settings