Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g016620 Solanum pennellii HOM05D004385 ORTHO05D005245 2.1e-100 369.0 179 100.0
Sopen07g005830 Solanum pennellii HOM05D004385 ORTHO05D005245 5.6e-74 281.2 153 89.5
Solyc07g015980.4 Solanum lycopersicum HOM05D004385 ORTHO05D005245 2.8e-73 278.9 153 88.2
CAN.G1581.2 Capsicum annuum HOM05D004385 ORTHO05D005245 1.4e-72 276.6 159 85.5
Dinv26468 Davidia involucrata HOM05D004385 ORTHO05D005245 6.0e-68 261.2 146 84.2
SalBow5G2207 Salvia bowleyana HOM05D004385 ORTHO05D005245 1.3e-67 260.0 150 82.7
MSTRG.10464 Avicennia marina HOM05D004385 ORTHO05D005245 2.5e-66 255.8 148 83.1
vmacro22292 Vaccinium macrocarpon HOM05D004385 ORTHO05D005245 3.3e-66 255.4 147 81.0
Rhsim05G0069600 Rhododendron simsii HOM05D004385 ORTHO05D005245 4.3e-66 255.0 147 81.0
Thecc.09G194100 Theobroma cacao HOM05D004385 ORTHO05D005245 5.6e-66 254.6 149 79.9
Potri.018G138206 Populus trichocarpa HOM05D004385 ORTHO05D005245 6.2e-65 251.1 146 80.8
Prupe.1G065500 Prunus persica HOM05D004385 ORTHO05D005245 6.2e-65 251.1 148 79.7
CiPaw.15G156000 Carya illinoinensis HOM05D004385 ORTHO05D005245 8.1e-65 250.8 146 80.8
Oeu028831.1 Olea europaea HOM05D004385 ORTHO05D005245 1.8e-64 249.6 150 79.3
Cpa.g.sc123.33 Carica papaya HOM05D004385 ORTHO05D005245 2.4e-64 249.2 146 78.8
Rhsim03G0268600 Rhododendron simsii HOM05D004385 ORTHO05D005245 2.4e-64 249.2 147 79.6
Cc00_g00420 Coffea canephora HOM05D004385 ORTHO05D005245 9.0e-64 247.3 146 79.5
Haze_19053 Corylus avellana HOM05D004385 ORTHO05D005245 9.0e-64 247.3 147 78.9
TWI32G0217 Tripterygium wilfordii HOM05D004385 ORTHO05D005245 1.5e-63 246.5 149 77.2
Nn1g09800 Nelumbo nucifera HOM05D004385 ORTHO05D005245 4.5e-63 245.0 177 66.7
Manes.03G078300 Manihot esculenta HOM05D004385 ORTHO05D005245 5.8e-63 244.6 146 78.8
Migut.L01912 Erythranthe guttata HOM05D004385 ORTHO05D005245 1.0e-62 243.8 148 77.7
Hma1.2p1_0284F.1_g113840 Hydrangea macrophylla HOM05D004385 ORTHO05D005245 1.3e-62 243.4 145 78.6
HanXRQChr03g0067331 Helianthus annuus HOM05D004385 ORTHO05D005245 1.7e-62 243.0 145 77.2
MD16G1239400 Malus domestica HOM05D004385 ORTHO05D005245 1.7e-62 243.0 145 75.9
QL11p009243 Quercus lobata HOM05D004385 ORTHO05D005245 1.7e-62 243.0 145 79.3
ECA240G2514 Erigeron canadensis HOM05D004385 ORTHO05D005245 2.2e-62 242.7 145 77.2
COL.COLO4_24913 Corchorus olitorius HOM05D004385 ORTHO05D005245 4.9e-62 241.5 149 75.2
Sed0013454 Sechium edule HOM05D004385 ORTHO05D005245 4.9e-62 241.5 149 75.2
EL10Ac2g03630 Beta vulgaris HOM05D004385 ORTHO05D005245 8.4e-62 240.7 147 76.2
Glyma.12G049000 Glycine max HOM05D004385 ORTHO05D005245 3.2e-61 238.8 146 75.3
Lalb_Chr19g0138471 Lupinus albus HOM05D004385 ORTHO05D005245 4.2e-61 238.4 156 72.4
Atru.chr7.972_Atru.chr7.973 Acer truncatum HOM05D004385 ORTHO05D005245 7.1e-61 237.7 146 76.7
CANSAT80G1931 Cannabis sativa HOM05D004385 ORTHO05D005245 9.3e-61 237.3 145 75.2
Psat0s8631g0040 Pisum sativum HOM05D004385 ORTHO05D005245 9.3e-61 237.3 149 73.8
Medtr4g068230 Medicago truncatula HOM05D004385 ORTHO05D005245 1.2e-60 236.9 148 74.3
VMungo1127G2221 Vigna mungo HOM05D004385 ORTHO05D005245 1.2e-60 236.9 146 75.3
Ca_20811_v3 Cicer arietinum L. HOM05D004385 ORTHO05D005245 1.6e-60 236.5 148 74.3
RhsimUnG0051500 Rhododendron simsii HOM05D004385 ORTHO05D005245 1.6e-60 236.5 142 78.9
Cc00_g00450 Coffea canephora HOM05D004385 ORTHO05D005245 2.1e-60 236.1 146 76.0
Lsat_1_v5_gn_7_57600 Lactuca sativa HOM05D004385 ORTHO05D005245 2.7e-60 235.7 147 74.1
TPR.G34256 Trifolium pratense HOM05D004385 ORTHO05D005245 2.7e-60 235.7 146 74.7
ClCG06G014050 Citrullus lanatus HOM05D004385 ORTHO05D005245 3.5e-60 235.3 145 75.2
FvH4_4g06230 Fragaria vesca HOM05D004385 ORTHO05D005245 3.5e-60 235.3 147 72.1
Rhsim01G0218300 Rhododendron simsii HOM05D004385 ORTHO05D005245 3.5e-60 235.3 147 76.2
RcHm_v2.0_Chr4g0397951 Rosa chinensis HOM05D004385 ORTHO05D005245 3.5e-60 235.3 147 72.1
FAN22G1494 Fragaria x ananassa HOM05D004385 ORTHO05D005245 7.9e-60 234.2 146 71.9
Gohir.D05G001400 Gossypium hirsutum HOM05D004385 ORTHO05D005245 7.9e-60 234.2 151 72.2
Gorai.009G001300 Gossypium raimondii HOM05D004385 ORTHO05D005245 7.9e-60 234.2 151 72.2
Medtr4g068240 Medicago truncatula HOM05D004385 ORTHO05D005245 7.9e-60 234.2 148 73.6
Medtr4g068270 Medicago truncatula HOM05D004385 ORTHO05D005245 7.9e-60 234.2 148 73.6
FAN07G2444 Fragaria x ananassa HOM05D004385 ORTHO05D005245 1.0e-59 233.8 144 72.9
FAN12G0289 Fragaria x ananassa HOM05D004385 ORTHO05D005245 1.0e-59 233.8 144 72.9
Phvul.011G051400 Phaseolus vulgaris HOM05D004385 ORTHO05D005245 1.0e-59 233.8 146 74.0
arahy.Tifrunner.gnm1.ann1.77JVZB Arachis hypogaea HOM05D004385 ORTHO05D005245 1.3e-59 233.4 169 66.9
DCAR_023663 Daucus carota HOM05D004385 ORTHO05D005245 1.8e-59 233.0 141 76.6
Lj3g0012868 Lotus japonicus HOM05D004385 ORTHO05D005245 1.8e-59 233.0 148 73.0
Psat1g029120 Pisum sativum HOM05D000870 ORTHO05D000715 2.3e-59 232.6 149 71.8
Cpa.g.sc123.30 Carica papaya HOM05D004385 ORTHO05D005245 3.0e-59 232.3 148 72.3
Gohir.A05G001100 Gossypium hirsutum HOM05D004385 ORTHO05D005245 3.9e-59 231.9 151 71.5
CANSAT80G0643 Cannabis sativa HOM05D004385 ORTHO05D005245 5.1e-59 231.5 156 67.3
CsaV3_2G035400 Cucumis sativus L. HOM05D004385 ORTHO05D005245 8.7e-59 230.7 145 73.1
AUR62028001 Chenopodium quinoa HOM05D004385 ORTHO05D005245 1.1e-58 230.3 143 75.5
Haze_19054 Corylus avellana HOM05D004385 ORTHO05D005245 1.1e-58 230.3 145 75.9
Psat0s5298g0040 Pisum sativum HOM05D004385 ORTHO05D005245 1.1e-58 230.3 146 72.6
Manes.03G078400 Manihot esculenta HOM05D004385 ORTHO05D005245 1.5e-58 229.9 146 75.3
CSS0002376 Camellia sinensis var. sinensis HOM05D004385 ORTHO05D005245 1.9e-58 229.6 146 76.0
arahy.Tifrunner.gnm1.ann1.D17V0C Arachis hypogaea HOM05D004385 ORTHO05D005245 2.5e-58 229.2 148 71.6
MELO3C019214.2 Cucumis melo HOM05D004385 ORTHO05D005245 4.3e-58 228.4 145 73.1
CsaV3_1G004600 Cucumis sativus L. HOM05D004385 ORTHO05D005245 5.7e-58 228.0 150 70.7
MBI11_g07424_MAGBIO Magnolia biondii HOM05D004385 ORTHO05D005245 7.4e-58 227.6 152 72.4
Migut.B00849 Erythranthe guttata HOM05D004385 ORTHO05D005245 9.6e-58 227.3 135 78.5
TAR626G1834 Trochodendron aralioides HOM05D004385 ORTHO05D005245 9.6e-58 227.3 144 72.9
SGA_v2.0_scaffold21G09624 Striga asiatica HOM05D004385 ORTHO05D005245 1.3e-57 226.9 131 83.2
PGR142G0778 Punica granatum HOM05D004385 ORTHO05D005245 2.1e-57 226.1 145 70.3
Cpa.g.sc123.32 Carica papaya HOM05D004385 ORTHO05D005245 2.8e-57 225.7 141 73.8
Eucgr.C02022 Eucalyptus grandis HOM05D004385 ORTHO05D005245 6.2e-57 224.6 143 74.1
ClCG06G014070 Citrullus lanatus HOM05D004385 ORTHO05D005245 2.4e-56 222.6 145 72.4
Nitab4.5_0001205g0010 Nicotiana tabacum HOM05D004385 ORTHO05D005245 3.1e-56 222.2 126 86.5
Sed0010902 Sechium edule HOM05D004385 ORTHO05D005245 5.3e-56 221.5 145 69.0
Peaxi162Scf00320g00412 Petunia axillaris HOM05D004385 ORTHO05D005245 9.0e-56 220.7 126 86.5
Nitab4.5_0000413g0040 Nicotiana tabacum HOM05D004385 ORTHO05D005245 1.2e-55 220.3 126 86.5
Sed0010048 Sechium edule HOM05D004385 ORTHO05D005245 3.4e-55 218.8 145 69.0
TPR.G10229 Trifolium pratense HOM05D004385 ORTHO05D005245 7.6e-55 217.6 146 69.2
ATR1147G022 Amborella trichopoda HOM05D004385 ORTHO05D005245 6.5e-54 214.5 164 62.8
CDE06G1948 Ceratophyllum demersum HOM05D004385 ORTHO05D005245 1.1e-53 213.8 144 68.1
HPP92_003174 Vanilla planifolia HOM05D004385 ORTHO05D005245 1.1e-53 213.8 144 68.8
MELO3C017386.2 Cucumis melo HOM05D004385 ORTHO05D005245 1.4e-53 213.4 150 68.0
SEGI_12293 Sequoiadendron giganteum HOM05D004385 ORTHO05D005245 2.5e-53 212.6 140 72.1
Migut.L00391 Erythranthe guttata HOM05D004385 ORTHO05D005245 9.3e-53 210.7 149 61.7
HanXRQChr03g0067221 Helianthus annuus HOM05D004385 ORTHO05D005245 9.3e-53 210.7 155 62.6
Peaxi162Scf00320g00317 Petunia axillaris HOM05D004385 ORTHO05D005245 9.3e-53 210.7 148 66.2
Peaxi162Scf00320g00411 Petunia axillaris HOM05D004385 ORTHO05D005245 9.3e-53 210.7 148 66.2
Phvul.011G051300 Phaseolus vulgaris HOM05D004385 ORTHO05D005245 9.3e-53 210.7 146 67.8
Sed0018057 Sechium edule HOM05D004385 ORTHO05D005245 9.3e-53 210.7 158 62.7
AUR62028000 Chenopodium quinoa HOM05D004385 ORTHO05D005245 3.5e-52 208.8 147 70.7
unitig_578.g16396 Utricularia gibba HOM05D004385 ORTHO05D005245 3.5e-52 208.8 125 79.2
Migut.L00572 Erythranthe guttata HOM05D004385 ORTHO05D005245 7.9e-52 207.6 149 61.1
Duzib168G1467 Durio zibethinus HOM05D004385 ORTHO05D005245 1.0e-51 207.2 127 74.8
SGA_v2.0_scaffold21G09621 Striga asiatica HOM05D004385 ORTHO05D005245 5.1e-51 204.9 157 58.6
VMungo1127G1209 Vigna mungo HOM05D004385 ORTHO05D005245 6.7e-51 204.5 146 67.8
Sopen00g013700 Solanum pennellii HOM05D004385 ORTHO05D005245 8.7e-51 204.1 151 62.9
EL10Ac2g03631 Beta vulgaris HOM05D004385 ORTHO05D005245 1.9e-50 203.0 155 61.9
Phvul.011G051100 Phaseolus vulgaris HOM05D004385 ORTHO05D005245 7.4e-50 201.1 146 65.8
Peaxi162Scf00320g00316 Petunia axillaris HOM05D004385 ORTHO05D005245 1.6e-49 199.9 149 63.1
Atru.chr9.1512 Acer truncatum HOM05D004385 ORTHO05D005245 6.3e-49 198.0 144 64.6
AUR62027997 Chenopodium quinoa HOM05D004385 ORTHO05D005245 2.4e-48 196.1 158 59.5
ECA240G4307 Erigeron canadensis HOM05D004385 ORTHO05D005245 9.0e-48 194.1 145 61.4
EL10Ac2g03634 Beta vulgaris HOM05D004385 ORTHO05D005245 3.4e-47 192.2 145 61.4
Hund03234 Selenicereus undatus HOM05D004385 ORTHO05D005245 7.7e-47 191.0 118 75.4
HanXRQChr03g0067391 Helianthus annuus HOM05D004385 ORTHO05D005245 1.0e-46 190.7 147 59.9
Mapoly0055s0075 Marchantia polymorpha HOM05D004385 ORTHO05D005245 1.7e-46 189.9 142 62.7
EL10Ac2g03633 Beta vulgaris HOM05D004385 ORTHO05D005245 3.2e-45 185.7 146 61.0
Pp3c15_21680 Physcomitrium patens HOM05D004385 ORTHO05D005245 3.2e-45 185.7 144 63.2
AagrBONN_evm.TU.Sc2ySwM_117.1864 Anthoceros agrestis HOM05D004385 ORTHO05D005245 6.1e-44 181.4 142 58.5
Solyc07g016020.1 Solanum lycopersicum HOM05D004385 ORTHO05D005245 2.3e-43 179.5 146 58.9
Sabra18G0119900 Salix brachista HOM05D004385 ORTHO05D005245 8.8e-43 177.6 102 82.4
AUR62028006 Chenopodium quinoa HOM05D004385 ORTHO05D005245 1.5e-42 176.8 147 57.8
EL10Ac2g04868 Beta vulgaris HOM05D004385 ORTHO05D005245 2.5e-42 176.0 125 67.2
AUR62020716 Chenopodium quinoa HOM05D004385 ORTHO05D005245 2.5e-42 176.0 148 58.1
EL10Ac2g04866 Beta vulgaris HOM05D004385 ORTHO05D005245 3.7e-41 172.2 127 64.6
CBR_g2798 Chara braunii HOM05D004385 ORTHO05D005245 6.3e-41 171.4 147 53.7
AUR62028004 Chenopodium quinoa HOM05D004385 ORTHO05D005245 2.4e-40 169.5 130 63.1
Cpa.g.sc123.31 Carica papaya HOM05D004385 ORTHO05D005245 4.1e-40 168.7 98 78.6
Ah.11g043620 Amaranthus hybridus HOM05D004385 ORTHO05D005245 7.7e-39 164.5 112 69.6
Solyc07g016040.3 Solanum lycopersicum HOM05D004385 ORTHO05D005245 7.7e-39 164.5 117 65.8
CDE06G1657 Ceratophyllum demersum HOM05D004385 ORTHO05D005245 6.5e-38 161.4 113 69.9
AUR62020721 Chenopodium quinoa HOM05D004385 ORTHO05D005245 1.4e-35 153.7 107 68.2
Ah.11g043630 Amaranthus hybridus HOM05D004385 ORTHO05D005245 2.8e-33 146.0 110 63.6
EL10Ac2g03632 Beta vulgaris HOM05D004385 ORTHO05D005245 2.8e-33 146.0 110 64.5
Psat0s3373g0120 Pisum sativum HOM05D000870 ORTHO05D005245 8.2e-33 144.4 149 49.7
Aqoxy2G04068 Aquilegia oxysepala HOM05D004385 ORTHO05D005245 1.4e-32 143.7 125 57.6
Potri.018G145600 Populus trichocarpa HOM05D004385 ORTHO05D005245 1.9e-29 133.3 78 78.2
PGSC0003DMG400022081 Solanum tuberosum HOM05D004385 ORTHO05D005245 4.8e-25 118.6 91 64.8
PRCOL_00000420 Prasinoderma coloniale HOM05D004385 ORTHO05D005245 1.7e-22 110.2 154 39.6
PGSC0003DMG400021019 Solanum tuberosum HOM05D004385 ORTHO05D005245 9.4e-21 104.4 52 92.3
TAR626G1477 Trochodendron aralioides HOM05D004385 ORTHO05D005245 9.8e-18 94.4 52 76.9
Cre02.g105150 Chlamydomonas reinhardtii HOM05D004385 ORTHO05D005245 3.1e-16 89.4 202 31.2
TPR.G34194 Trifolium pratense HOM05D004385 ORTHO05D005245 1.6e-15 87.0 52 73.1
Atru.chr9.1488 Acer truncatum HOM05D004385 ORTHO05D005245 7.7e-15 84.7 52 67.3
Zm00001eb064440 Zea mays HOM05D004385 ORTHO05D005245 7.7e-15 84.7 52 69.2
Sc06g0001470 Simmondsia chinensis HOM05D004385 ORTHO05D005245 2.1e-12 76.6 52 55.8
Oeu000968.1 Olea europaea HOM05D004385 ORTHO05D005245 5.7e-10 68.6 57 63.2


User provided reference genes

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