Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g013160 Solanum pennellii HOM05D000017 ORTHO05D000308 1.0e-91 340.1 177 100.0
Solyc01g020372.1 Solanum lycopersicum HOM05D000017 ORTHO05D000308 1.5e-31 140.2 245 40.8
Sopen09g011360 Solanum pennellii HOM05D000017 ORTHO05D000308 7.6e-31 137.9 212 42.5
PGSC0003DMG400045965 Solanum tuberosum HOM05D000017 ORTHO05D000308 1.2e-28 130.6 304 37.2
Solyc09g056224.1 Solanum lycopersicum HOM05D000017 ORTHO05D000308 8.1e-25 117.9 96 69.8
Solyc10g075112.1 Solanum lycopersicum HOM05D000017 ORTHO05D000308 1.4e-24 117.1 96 69.8
Sopen12g022700 Solanum pennellii HOM05D000017 ORTHO05D000308 2.4e-24 116.3 96 69.8
Solyc03g150113.1 Solanum lycopersicum HOM05D000017 ORTHO05D000308 9.0e-24 114.4 96 67.7
Sopen04g011160 Solanum pennellii HOM05D000017 ORTHO05D000013 1.2e-23 114.0 99 65.7
Solyc04g024967.1 Solanum lycopersicum HOM05D000017 ORTHO05D000308 7.4e-18 94.7 81 69.1
Solyc04g150140.1 Solanum lycopersicum HOM05D000017 ORTHO05D000308 8.2e-17 91.3 60 81.7
Sopen01g013160 Solanum pennellii HOM05D000017 ORTHO05D000308 1.3e-14 84.0 87 59.8
Solyc09g056226.1 Solanum lycopersicum HOM05D000017 ORTHO05D000308 7.9e-12 74.7 40 85.0
Solyc04g024963.1 Solanum lycopersicum HOM05D000017 ORTHO05D000308 2.3e-11 73.2 40 82.5
Sopen04g020030 Solanum pennellii HOM05D000017 ORTHO05D000013 2.3e-11 73.2 40 82.5
CAN.G1483.6 Capsicum annuum HOM05D000017 ORTHO05D000308 6.7e-11 71.6 52 63.5
CAN.G93.41 Capsicum annuum HOM05D000017 ORTHO05D000308 8.7e-11 71.2 40 77.5
Solyc03g059123.1 Solanum lycopersicum HOM05D000017 ORTHO05D000308 1.3e-09 67.4 40 82.5
PGSC0003DMG400003236 Solanum tuberosum HOM05D000017 ORTHO05D000308 2.8e-09 66.2 174 35.6
Solyc09g056228.1 Solanum lycopersicum HOM05D000017 ORTHO05D000308 6.3e-09 65.1 37 78.4
CAN.G578.16 Capsicum annuum HOM05D000017 ORTHO05D000308 1.1e-08 64.3 45 64.4
Solyc03g150129.1 Solanum lycopersicum HOM05D000017 ORTHO05D000308 1.1e-08 64.3 38 73.7
Solyc10g075114.1 Solanum lycopersicum HOM05D000017 ORTHO05D000308 1.8e-08 63.5 37 75.7
CAN.G1441.1 Capsicum annuum HOM05D000017 ORTHO05D000308 2.4e-08 63.2 66 51.5
CAN.G2241.1 Capsicum annuum HOM05D000017 ORTHO05D000308 4.1e-08 62.4 57 52.6
Solyc02g030525.1 Solanum lycopersicum HOM05D000017 ORTHO05D000308 4.1e-08 62.4 40 67.5
Sopen09g016780 Solanum pennellii HOM05D000017 ORTHO05D000308 9.0e-08 61.2 56 53.6
Nitab4.5_0008188g0020 Nicotiana tabacum HOM05D000266 ORTHO05D000308 1.5e-07 60.5 40 65.0
Solyc03g059315.1 Solanum lycopersicum HOM05D000017 ORTHO05D000308 3.4e-07 59.3 33 75.8
Sopen03g016270 Solanum pennellii HOM05D000017 ORTHO05D000308 4.5e-07 58.9 40 65.0
Nitab4.5_0000185g0280 Nicotiana tabacum HOM05D000017 ORTHO05D000308 7.7e-07 58.2 40 65.0
Nitab4.5_0002948g0040 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.3e-06 57.4 40 62.5
Nitab4.5_0003037g0040 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.3e-06 57.4 104 38.5
Nitab4.5_0004770g0100 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.7e-06 57.0 84 36.9
Peaxi162Scf00799g00043 Petunia axillaris HOM05D000017 ORTHO05D000308 1.7e-06 57.0 52 51.9
Nitab4.5_0000842g0130 Nicotiana tabacum HOM05D000017 ORTHO05D000308 2.2e-06 56.6 40 62.5
Peaxi162Scf00555g00035 Petunia axillaris HOM05D000017 ORTHO05D000308 2.2e-06 56.6 59 47.5
Nitab4.5_0000086g0070 Nicotiana tabacum HOM05D000017 ORTHO05D000308 2.9e-06 56.2 55 45.5
Nitab4.5_0000848g0160 Nicotiana tabacum HOM05D000017 ORTHO05D000308 2.9e-06 56.2 59 47.5
Nitab4.5_0012297g0030 Nicotiana tabacum HOM05D000017 ORTHO05D000308 2.9e-06 56.2 40 60.0
Solyc06g048905.1 Solanum lycopersicum HOM05D000017 ORTHO05D000308 2.9e-06 56.2 37 70.3
Nitab4.5_0008180g0040 Nicotiana tabacum HOM05D000017 ORTHO05D000308 3.8e-06 55.8 52 46.2
Peaxi162Scf01093g00116 Petunia axillaris HOM05D000017 ORTHO05D000013 5.0e-06 55.5 40 60.0
Nitab4.5_0001292g0080 Nicotiana tabacum HOM05D000017 ORTHO05D000013 6.5e-06 55.1 105 37.1
Solyc06g036555.1 Solanum lycopersicum HOM05D000017 ORTHO05D006370 6.5e-06 55.1 37 62.2
Nitab4.5_0000857g0150 Nicotiana tabacum HOM05D000017 ORTHO05D000308 8.5e-06 54.7 62 40.3
Nitab4.5_0001668g0150 Nicotiana tabacum HOM05D000017 ORTHO05D000308 8.5e-06 54.7 41 56.1
Peaxi162Scf00538g00532 Petunia axillaris HOM05D000017 ORTHO05D000308 8.5e-06 54.7 37 59.5


User provided reference genes

Program Settings