Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g011100 Solanum pennellii HOM05D000004 ORTHO05D000002 3.9e-72 274.6 133 100.0
Sopen07g013260 Solanum pennellii HOM05D000691 ORTHO05D000378 8.3e-22 107.5 162 42.0
Sopen08g010830 Solanum pennellii HOM05D000004 ORTHO05D000378 8.3e-22 107.5 165 42.4
Sopen07g011060 Solanum pennellii HOM05D000691 ORTHO05D000378 7.0e-21 104.4 128 46.9
Sopen07g009500 Solanum pennellii HOM05D001275 ORTHO05D001570 7.2e-18 94.4 188 35.1
Sopen08g014650 Solanum pennellii HOM05D000691 ORTHO05D000002 1.4e-16 90.1 155 38.7
Sopen07g008430 Solanum pennellii HOM05D000004 ORTHO05D000378 2.0e-15 86.3 132 41.7
Sopen08g018170 Solanum pennellii HOM05D000002 ORTHO05D002065 2.6e-15 85.9 131 42.7
Sopen04g016000 Solanum pennellii HOM05D000004 ORTHO05D000378 3.2e-13 79.0 244 28.7
Sopen03g009560 Solanum pennellii HOM05D000004 ORTHO05D000002 4.1e-13 78.6 56 66.1
Sopen06g016840 Solanum pennellii HOM05D000004 ORTHO05D000002 2.0e-12 76.3 56 60.7
Sopen10g020660 Solanum pennellii HOM05D000004 ORTHO05D000002 2.0e-12 76.3 56 60.7
Sopen07g004930 Solanum pennellii HOM05D000004 ORTHO05D000002 2.7e-12 75.9 55 63.6
Sopen07g006720 Solanum pennellii HOM05D000004 ORTHO05D000002 2.7e-12 75.9 45 75.6
Sopen07g021860 Solanum pennellii HOM05D000004 ORTHO05D000002 2.7e-12 75.9 55 63.6
Sopen05g011340 Solanum pennellii HOM05D000004 ORTHO05D000002 4.5e-12 75.1 56 60.7
Sopen04g014250 Solanum pennellii HOM05D000004 ORTHO05D000378 5.9e-12 74.7 56 58.9
Sopen09g014170 Solanum pennellii HOM05D000691 ORTHO05D000378 1.0e-11 73.9 56 60.7
Sopen04g010080 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-11 73.2 55 60.0
Sopen07g017210 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-11 73.2 56 60.7
Sopen12g011680 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-11 73.2 56 60.7
Sopen01g021200 Solanum pennellii HOM05D000004 ORTHO05D000378 2.9e-11 72.4 40 85.0
Sopen09g023520 Solanum pennellii HOM05D000004 ORTHO05D000002 3.9e-11 72.0 55 60.0
Sopen01g026700 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-11 71.6 133 35.3
Sopen10g009210 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-11 71.6 49 65.3
FvH4_6g34501 Fragaria vesca HOM05D000004 ORTHO05D000002 8.6e-11 70.9 56 57.1
Sopen00g001810 Solanum pennellii HOM05D000004 ORTHO05D000002 1.9e-10 69.7 44 65.9
Sopen02g011330 Solanum pennellii HOM05D000004 ORTHO05D008835 1.9e-10 69.7 201 27.9
Sopen03g024480 Solanum pennellii HOM05D000004 ORTHO05D000002 1.9e-10 69.7 44 68.2
Solyc01g057007.1 Solanum lycopersicum HOM05D000004 ORTHO05D008835 2.5e-10 69.3 40 82.5
Sopen10g010330 Solanum pennellii HOM05D000004 ORTHO05D000002 2.5e-10 69.3 49 67.3
Sp1g32920 Schrenkiella parvula HOM05D000004 ORTHO05D000002 3.3e-10 68.9 103 37.9
SGA_v2.0_scaffold245G44593 Striga asiatica HOM05D000004 ORTHO05D000002 3.3e-10 68.9 53 58.5
CSS0037139 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.3e-10 68.6 53 56.6
CsaV3_7G011610 Cucumis sativus L. HOM05D000004 ORTHO05D000002 4.3e-10 68.6 49 61.2
Sopen02g007910 Solanum pennellii HOM05D000004 ORTHO05D000002 4.3e-10 68.6 70 48.6
Sopen07g019030 Solanum pennellii HOM05D000691 ORTHO05D000378 4.3e-10 68.6 43 72.1
Sopen10g015090 Solanum pennellii HOM05D000004 ORTHO05D000002 4.3e-10 68.6 56 58.9
CSS0009919 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.6e-10 68.2 42 69.0
Sopen08g004730 Solanum pennellii HOM05D000004 ORTHO05D000002 5.6e-10 68.2 56 60.7
Sopen11g013950 Solanum pennellii HOM05D000004 ORTHO05D000002 5.6e-10 68.2 129 35.7
CSS0004339 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.5e-10 67.4 53 52.8
FvH4_2g02781 Fragaria vesca HOM05D000004 ORTHO05D000002 1.2e-09 67.0 62 48.4
EL10As7g23736 Beta vulgaris HOM05D000004 ORTHO05D000002 2.1e-09 66.2 55 54.5
Sopen10g009560 Solanum pennellii HOM05D000691 ORTHO05D000378 2.8e-09 65.9 56 57.1
Sopen09g014160 Solanum pennellii HOM05D000004 ORTHO05D000002 3.6e-09 65.5 58 60.3
CBR_g51683 Chara braunii HOM05D000019 ORTHO05D000353 4.7e-09 65.1 156 31.4
Sopen06g010510 Solanum pennellii HOM05D000004 ORTHO05D000002 4.7e-09 65.1 136 33.8
SHI10874 Sapria himalayana HOM05D000004 ORTHO05D000002 6.1e-09 64.7 53 58.5
CAN.G1809.4 Capsicum annuum HOM05D000004 ORTHO05D000002 8.0e-09 64.3 132 35.6
Sopen11g016330 Solanum pennellii HOM05D000691 ORTHO05D000378 8.0e-09 64.3 146 37.7
CAN.G1226.33 Capsicum annuum HOM05D000004 ORTHO05D000002 1.0e-08 63.9 131 32.8
CAN.G1250.3 Capsicum annuum HOM05D000004 ORTHO05D000002 1.0e-08 63.9 131 32.8
CAN.G1445.1 Capsicum annuum HOM05D000004 ORTHO05D000002 1.0e-08 63.9 131 32.8
CAN.G55.5 Capsicum annuum HOM05D000004 ORTHO05D000002 1.0e-08 63.9 131 32.8
CAN.G801.8 Capsicum annuum HOM05D000004 ORTHO05D000002 1.0e-08 63.9 131 32.8
CAN.G8386.1 Capsicum annuum HOM05D000004 ORTHO05D000002 1.0e-08 63.9 131 33.6
CAN.G890.31 Capsicum annuum HOM05D000004 ORTHO05D000002 1.0e-08 63.9 131 32.8
Duzib205G1158 Durio zibethinus HOM05D000004 ORTHO05D008835 1.0e-08 63.9 142 31.7
SHI10618 Sapria himalayana HOM05D000004 ORTHO05D000002 1.0e-08 63.9 54 55.6
Sopen08g011270 Solanum pennellii HOM05D000004 ORTHO05D000002 1.0e-08 63.9 58 56.9
CAN.G2189.1 Capsicum annuum HOM05D000004 ORTHO05D000002 1.8e-08 63.2 131 32.8
CAN.G2189.3 Capsicum annuum HOM05D000004 ORTHO05D000002 1.8e-08 63.2 131 32.8
AUR62009972 Chenopodium quinoa HOM05D000691 ORTHO05D000002 1.8e-08 63.2 65 44.6
Sopen02g006530 Solanum pennellii HOM05D000004 ORTHO05D000002 1.8e-08 63.2 45 57.8
Sopen05g005110 Solanum pennellii HOM05D000004 ORTHO05D000002 1.8e-08 63.2 56 48.2
Sopen01g014080 Solanum pennellii HOM05D000014 ORTHO05D000016 2.3e-08 62.8 56 48.2
Sopen02g010700 Solanum pennellii HOM05D000004 ORTHO05D000002 2.3e-08 62.8 40 72.5
CAN.G15307.1 Capsicum annuum HOM05D000004 ORTHO05D000002 3.1e-08 62.4 131 32.1
SEGI_15568 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 3.1e-08 62.4 46 56.5
Sopen01g017490 Solanum pennellii HOM05D000004 ORTHO05D000002 3.1e-08 62.4 133 33.8
Sopen05g010910 Solanum pennellii HOM05D000004 ORTHO05D008835 3.1e-08 62.4 40 75.0
Sopen07g006330 Solanum pennellii HOM05D000004 ORTHO05D000002 3.1e-08 62.4 56 48.2
Sopen11g025100 Solanum pennellii HOM05D000004 ORTHO05D000002 3.1e-08 62.4 40 70.0
CAN.G38.32 Capsicum annuum HOM05D000004 ORTHO05D000002 4.0e-08 62.0 132 31.8
ECA236G5064 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.0e-08 62.0 130 30.8
SHI31503 Sapria himalayana HOM05D000004 ORTHO05D000002 4.0e-08 62.0 55 50.9
Sopen02g011110 Solanum pennellii HOM05D000004 ORTHO05D000002 4.0e-08 62.0 40 70.0
Sopen07g006770 Solanum pennellii HOM05D000004 ORTHO05D000002 4.0e-08 62.0 40 70.0
CSS0044219 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D008835 5.2e-08 61.6 62 53.2
Sopen01g008650 Solanum pennellii HOM05D000004 ORTHO05D000002 5.2e-08 61.6 148 31.1
Sopen02g009180 Solanum pennellii HOM05D000004 ORTHO05D000002 5.2e-08 61.6 40 70.0
Sopen02g010310 Solanum pennellii HOM05D000004 ORTHO05D000002 5.2e-08 61.6 56 46.4
Sopen08g015760 Solanum pennellii HOM05D000004 ORTHO05D000378 5.2e-08 61.6 40 70.0
Sopen11g024700 Solanum pennellii HOM05D000004 ORTHO05D000002 5.2e-08 61.6 56 46.4
Sopen01g020710 Solanum pennellii HOM05D000004 ORTHO05D000002 6.8e-08 61.2 132 34.1
Sopen05g017820 Solanum pennellii HOM05D000004 ORTHO05D000002 6.8e-08 61.2 153 31.4
AUR62005160 Chenopodium quinoa HOM05D000691 ORTHO05D000378 8.9e-08 60.8 44 56.8
Ca_03801_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 8.9e-08 60.8 126 33.3
Sp7g07400 Schrenkiella parvula HOM05D000004 ORTHO05D000002 8.9e-08 60.8 56 51.8
Sopen01g009890 Solanum pennellii HOM05D000004 ORTHO05D000378 8.9e-08 60.8 40 75.0
Sopen01g025050 Solanum pennellii HOM05D000004 ORTHO05D000002 8.9e-08 60.8 198 26.8
Sopen02g008090 Solanum pennellii HOM05D000004 ORTHO05D000002 8.9e-08 60.8 56 48.2
Sopen02g010000 Solanum pennellii HOM05D000004 ORTHO05D000002 8.9e-08 60.8 40 70.0
Sopen02g012540 Solanum pennellii HOM05D000002 ORTHO05D000001 8.9e-08 60.8 56 44.6
ClCG08G000140 Citrullus lanatus HOM05D000004 ORTHO05D000002 1.2e-07 60.5 49 51.0
SHI20491 Sapria himalayana HOM05D000004 ORTHO05D000002 1.2e-07 60.5 54 51.9
SHI20660 Sapria himalayana HOM05D000004 ORTHO05D000002 1.2e-07 60.5 145 30.3
Sopen02g006770 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-07 60.5 40 70.0
Sopen02g009190 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-07 60.5 56 46.4
Sopen02g009980 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-07 60.5 40 70.0
Sopen02g010830 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-07 60.5 40 70.0
Sopen02g012140 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-07 60.5 40 70.0
Sopen04g017030 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-07 60.5 56 46.4
Sopen05g011350 Solanum pennellii HOM05D000004 ORTHO05D000378 1.2e-07 60.5 40 72.5
Sopen06g011880 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-07 60.5 53 49.1
Sopen05g013270 Solanum pennellii HOM05D000004 ORTHO05D000378 1.5e-07 60.1 40 67.5
Sopen09g013140 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-07 60.1 40 70.0
SHI06336 Sapria himalayana HOM05D000004 ORTHO05D000378 2.0e-07 59.7 133 34.6
Sopen02g007410 Solanum pennellii HOM05D000004 ORTHO05D000378 2.0e-07 59.7 40 72.5
Sopen02g008020 Solanum pennellii HOM05D000004 ORTHO05D000002 2.0e-07 59.7 40 67.5
Sopen03g018360 Solanum pennellii HOM05D000691 ORTHO05D000378 2.0e-07 59.7 56 53.6
CBR_g37005 Chara braunii HOM05D000019 ORTHO05D000353 2.6e-07 59.3 132 31.8
SEGI_18102 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 2.6e-07 59.3 48 52.1
Sopen12g010920 Solanum pennellii HOM05D000004 ORTHO05D000002 2.6e-07 59.3 122 31.1
Ah.10g026480 Amaranthus hybridus HOM05D000004 ORTHO05D000002 3.4e-07 58.9 63 47.6
ECA263G0001 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.4e-07 58.9 144 29.2
Sopen02g005430 Solanum pennellii HOM05D000691 ORTHO05D000378 3.4e-07 58.9 40 67.5
SHI27732 Sapria himalayana HOM05D000004 ORTHO05D000002 4.4e-07 58.5 48 52.1
Sopen06g004640 Solanum pennellii HOM05D000004 ORTHO05D000002 4.4e-07 58.5 56 46.4
Sopen12g011100 Solanum pennellii HOM05D000004 ORTHO05D000002 4.4e-07 58.5 39 71.8
Sopen02g006790 Solanum pennellii HOM05D000004 ORTHO05D000002 5.8e-07 58.2 40 65.0
Sopen02g007920 Solanum pennellii HOM05D000691 ORTHO05D000378 5.8e-07 58.2 40 67.5
Sopen05g027790 Solanum pennellii HOM05D000004 ORTHO05D000378 5.8e-07 58.2 40 67.5
SHI33116 Sapria himalayana HOM05D000004 ORTHO05D000002 7.5e-07 57.8 55 45.5
Sopen02g010150 Solanum pennellii HOM05D000004 ORTHO05D000002 7.5e-07 57.8 55 43.6
Sopen12g015730 Solanum pennellii HOM05D000004 ORTHO05D000002 7.5e-07 57.8 108 32.4
Oeu006667.1 Olea europaea HOM05D000004 ORTHO05D008835 9.8e-07 57.4 40 67.5
Oeu018548.1 Olea europaea HOM05D000004 ORTHO05D000378 9.8e-07 57.4 40 65.0
Oeu039051.1 Olea europaea HOM05D000004 ORTHO05D008835 9.8e-07 57.4 40 67.5
SHI25401 Sapria himalayana HOM05D000004 ORTHO05D000378 9.8e-07 57.4 45 53.3
SHI33374 Sapria himalayana HOM05D000004 ORTHO05D008835 1.3e-06 57.0 40 67.5
SpUn0003_0110 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.3e-06 57.0 56 46.4
Sopen05g017110 Solanum pennellii HOM05D001906 ORTHO05D000378 1.3e-06 57.0 54 55.6
Sopen08g006070 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-06 57.0 118 32.2
Sopen09g016390 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-06 57.0 46 54.3
CANSAT78G1892 Cannabis sativa HOM05D000004 ORTHO05D000002 1.7e-06 56.6 46 56.5
Sopen02g008030 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-06 56.6 56 42.9
Sopen09g013650 Solanum pennellii HOM05D000004 ORTHO05D000378 1.7e-06 56.6 39 61.5
SHI08325 Sapria himalayana HOM05D000004 ORTHO05D000002 2.2e-06 56.2 48 54.2
SHI30395 Sapria himalayana HOM05D000004 ORTHO05D008835 2.2e-06 56.2 40 65.0
CSS0048334 Camellia sinensis var. sinensis HOM05D000072 ORTHO05D000002 2.9e-06 55.8 139 30.9
SHI10912 Sapria himalayana HOM05D000004 ORTHO05D008835 2.9e-06 55.8 232 24.1
SHI26746 Sapria himalayana HOM05D000004 ORTHO05D000378 2.9e-06 55.8 44 52.3
Solyc02g044005.1 Solanum lycopersicum HOM05D000004 ORTHO05D000001 2.9e-06 55.8 42 54.8
Sopen02g007400 Solanum pennellii HOM05D000004 ORTHO05D008835 2.9e-06 55.8 40 70.0
Sopen02g012450 Solanum pennellii HOM05D000004 ORTHO05D000002 2.9e-06 55.8 56 42.9
ECA233G4539 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.7e-06 55.5 145 27.6
Oeu025365.1 Olea europaea HOM05D000004 ORTHO05D008835 3.7e-06 55.5 40 62.5
SEGI_25895 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 3.7e-06 55.5 42 59.5
Sopen03g008510 Solanum pennellii HOM05D000004 ORTHO05D000002 3.7e-06 55.5 122 28.7
Sopen09g008780 Solanum pennellii HOM05D000691 ORTHO05D000378 3.7e-06 55.5 40 67.5
FvH4_1g29810 Fragaria vesca HOM05D000004 ORTHO05D000002 4.9e-06 55.1 58 48.3
Oeu061141.1 Olea europaea HOM05D000004 ORTHO05D000378 4.9e-06 55.1 40 62.5
RcHm_v2.0_Chr4g0401341 Rosa chinensis HOM05D000004 ORTHO05D000002 4.9e-06 55.1 46 52.2
SEGI_21685 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 4.9e-06 55.1 40 60.0
Sopen07g009340 Solanum pennellii HOM05D000004 ORTHO05D000002 4.9e-06 55.1 126 31.0
Sopen10g010680 Solanum pennellii HOM05D000004 ORTHO05D000034 4.9e-06 55.1 139 29.5
Sopen10g018560 Solanum pennellii HOM05D000004 ORTHO05D000002 4.9e-06 55.1 122 32.8
CSS0002326 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.4e-06 54.7 58 50.0
CSS0003422 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.4e-06 54.7 48 54.2
MD11G1009100 Malus domestica HOM05D000004 ORTHO05D000002 6.4e-06 54.7 40 60.0
Oeu034202.1 Olea europaea HOM05D000004 ORTHO05D000378 6.4e-06 54.7 40 65.0
Oeu049268.1 Olea europaea HOM05D000691 ORTHO05D000378 6.4e-06 54.7 40 65.0
SHI27590 Sapria himalayana HOM05D000004 ORTHO05D000002 6.4e-06 54.7 63 44.4
Sopen09g020730 Solanum pennellii HOM05D000004 ORTHO05D000002 6.4e-06 54.7 151 30.5
Sopen10g017900 Solanum pennellii HOM05D000004 ORTHO05D000002 6.4e-06 54.7 56 39.3
THA.LOC104806071 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 6.4e-06 54.7 40 62.5
THA.LOC104816062 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 6.4e-06 54.7 40 62.5
THA.LOC109117174 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 6.4e-06 54.7 40 62.5
CSS0048183 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.3e-06 54.3 137 27.7
Oeu003471.1 Olea europaea HOM05D000004 ORTHO05D000002 8.3e-06 54.3 38 65.8
SHI19347 Sapria himalayana HOM05D000004 ORTHO05D000002 8.3e-06 54.3 55 45.5
SHI27535 Sapria himalayana HOM05D000004 ORTHO05D000002 8.3e-06 54.3 48 52.1
Sopen01g016830 Solanum pennellii HOM05D000691 ORTHO05D000378 8.3e-06 54.3 34 73.5


User provided reference genes

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