Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g007210 Solanum pennellii HOM05D003888 ORTHO05D007163 7.4e-45 183.3 83 100.0
PGSC0003DMG400035776 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.2e-32 140.2 82 74.4
PGSC0003DMG400039182 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.4e-32 139.8 82 74.4
Sopen02g008250 Solanum pennellii HOM05D003888 ORTHO05D007163 4.7e-31 137.5 73 84.9
PGSC0003DMG400037028 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.1e-27 124.4 81 69.1
PGSC0003DMG400009654 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.7e-23 110.9 57 84.2
Solyc10g049330.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.0e-22 108.2 100 51.0
Solyc04g005730.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.7e-20 101.3 83 54.2
Sopen06g011310 Solanum pennellii HOM05D003888 ORTHO05D007163 1.4e-19 99.4 83 50.6
PGSC0003DMG400020859 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.1e-19 97.8 83 49.4
Peaxi162Scf00107g00021 Petunia axillaris HOM05D008541 ORTHO05D010458 2.0e-18 95.5 57 70.2
CAN.G1224.2 Capsicum annuum HOM05D003888 ORTHO05D007163 5.9e-18 94.0 83 47.0
PGSC0003DMG400046763 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.9e-18 94.0 83 47.0
Solyc03g065230.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.9e-17 91.7 92 50.0
Sopen11g014670 Solanum pennellii HOM05D003888 ORTHO05D007163 3.8e-17 91.3 78 55.1
PGSC0003DMG400010920 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.5e-16 88.6 83 45.8
PGSC0003DMG400038965 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.5e-16 88.6 83 49.4
PGSC0003DMG400016021 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.2e-16 87.8 83 44.6
Peaxi162Scf00529g00022 Petunia axillaris HOM05D003888 ORTHO05D007163 4.7e-15 84.3 74 51.4
Peaxi162Scf00272g00044 Petunia axillaris HOM05D003888 ORTHO05D007163 2.3e-14 82.0 51 68.6
AUR62039442 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.5e-13 79.3 86 43.0
Nitab4.5_0012229g0010 Nicotiana tabacum HOM05D003888 ORTHO05D007163 1.5e-13 79.3 70 51.4
PGSC0003DMG400040445 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.6e-13 78.6 64 53.1
EL10Ac5g11043 Beta vulgaris HOM05D000107 ORTHO05D007163 5.7e-13 77.4 84 40.5
EL10Ac8g19540 Beta vulgaris HOM05D000107 ORTHO05D000062 5.7e-13 77.4 84 40.5
EL10Ac4g09043 Beta vulgaris HOM05D003888 ORTHO05D007163 9.8e-13 76.6 84 40.5
EL10Ac9g20905 Beta vulgaris HOM05D003888 ORTHO05D007163 9.8e-13 76.6 84 40.5
EL10Ac5g11837 Beta vulgaris HOM05D000107 ORTHO05D000062 1.3e-12 76.3 84 39.3
EL10Ac1g02206 Beta vulgaris HOM05D000107 ORTHO05D000062 2.2e-12 75.5 84 41.7
EL10Ac6g13838 Beta vulgaris HOM05D003888 ORTHO05D007163 2.8e-12 75.1 84 39.3
EL10Ac6g14504 Beta vulgaris HOM05D000107 ORTHO05D007163 2.8e-12 75.1 81 42.0
EL10Ac9g20800 Beta vulgaris HOM05D003888 ORTHO05D007163 2.8e-12 75.1 84 36.9
AUR62025805 Chenopodium quinoa HOM05D003888 ORTHO05D007163 3.7e-12 74.7 86 38.4
Sopen04g019130 Solanum pennellii HOM05D003888 ORTHO05D007163 3.7e-12 74.7 38 86.8
EL10Ac1g02033 Beta vulgaris HOM05D003888 ORTHO05D007163 4.8e-12 74.3 84 39.3
EL10Ac2g03313 Beta vulgaris HOM05D000107 ORTHO05D000062 4.8e-12 74.3 84 36.9
Hund12964 Selenicereus undatus HOM05D009146 ORTHO05D011649 4.8e-12 74.3 87 39.1
EL10Ac8g19343 Beta vulgaris HOM05D000107 ORTHO05D007163 1.4e-11 72.8 84 39.3
Sopen08g014600 Solanum pennellii HOM05D003888 ORTHO05D007163 2.4e-11 72.0 38 86.8
AUR62029973 Chenopodium quinoa HOM05D003888 ORTHO05D007163 4.1e-11 71.2 84 35.7
Solyc10g052640.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.6e-10 69.3 81 42.0
Nitab4.5_0001375g0180 Nicotiana tabacum HOM05D003888 ORTHO05D007163 5.9e-10 67.4 49 59.2
EL10Ac9g20782 Beta vulgaris HOM05D010317 ORTHO05D007163 1.3e-09 66.2 53 47.2
PGSC0003DMG400037695 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.3e-09 66.2 57 49.1
Sopen03g013860 Solanum pennellii HOM05D000004 ORTHO05D007166 2.2e-09 65.5 61 45.9
PGSC0003DMG400045356 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.5e-09 63.5 57 45.6
EL10As3g23351 Beta vulgaris HOM05D008455 ORTHO05D009597 2.5e-08 62.0 86 32.6
Solyc01g014050.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 4.2e-08 61.2 38 65.8
Hund15065 Selenicereus undatus HOM05D009146 ORTHO05D011649 5.5e-08 60.8 55 36.4
PGSC0003DMG400003494 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.5e-08 60.8 25 96.0
PGSC0003DMG400037082 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.5e-08 60.8 56 46.4
PGSC0003DMG400030290 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.7e-07 58.5 57 42.1
EL10Ac2g03866 Beta vulgaris HOM05D000107 ORTHO05D007163 3.6e-07 58.2 82 31.7
PGSC0003DMG400035226 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.6e-07 58.2 51 49.0
AUR62024779 Chenopodium quinoa HOM05D003888 ORTHO05D007163 4.7e-07 57.8 86 33.7
PGSC0003DMG400035178 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.7e-07 57.8 51 49.0
EL10Ac2g02915 Beta vulgaris HOM05D000107 ORTHO05D000062 6.8e-06 53.9 84 32.1
PGSC0003DMG400017141 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.8e-06 53.9 25 88.0
CAN.G472.23 Capsicum annuum HOM05D003888 ORTHO05D007163 8.8e-06 53.5 52 40.4
AUR62037959 Chenopodium quinoa HOM05D000107 ORTHO05D009597 8.8e-06 53.5 88 30.7


User provided reference genes

Program Settings