Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g004720 Solanum pennellii HOM05D005029 ORTHO05D006052 5.8e-148 527.7 301 100.0
Solyc07g008780.3 Solanum lycopersicum HOM05D005029 ORTHO05D006052 2.7e-145 518.8 301 96.7
PGSC0003DMG400028729 Solanum tuberosum HOM05D005029 ORTHO05D006052 6.2e-142 507.7 301 94.0
Nitab4.5_0000617g0020 Nicotiana tabacum HOM05D005029 ORTHO05D006052 4.3e-127 458.4 301 83.4
Nitab4.5_0008862g0020 Nicotiana tabacum HOM05D005029 ORTHO05D006052 1.4e-125 453.4 303 84.8
Peaxi162Scf01600g00016 Petunia axillaris HOM05D005029 ORTHO05D006052 2.5e-122 442.6 302 82.8
Dinv41171 Davidia involucrata HOM05D005029 ORTHO05D006052 2.4e-93 346.3 280 71.1
Cc00_g10760 Coffea canephora HOM05D005029 ORTHO05D006052 4.1e-85 318.9 278 68.7
Duzib170G0048 Durio zibethinus HOM05D005029 ORTHO05D006052 5.3e-85 318.5 304 59.5
CiPaw.08G032800 Carya illinoinensis HOM05D005029 ORTHO05D006052 9.4e-82 307.8 310 59.7
COL.COLO4_08419 Corchorus olitorius HOM05D005029 ORTHO05D006052 9.4e-82 307.8 275 62.2
Gohir.D13G213100 Gossypium hirsutum HOM05D005029 ORTHO05D006052 5.2e-80 302.0 305 58.4
Gorai.013G243400 Gossypium raimondii HOM05D005029 ORTHO05D006052 5.2e-80 302.0 305 58.4
Haze_22015 Corylus avellana HOM05D005029 ORTHO05D006052 3.4e-79 299.3 300 59.3
Cpa.g.c27842.2 Carica papaya HOM05D005029 ORTHO05D006052 5.7e-79 298.5 308 58.8
Duzib150G1033 Durio zibethinus HOM05D005029 ORTHO05D006052 5.7e-79 298.5 304 56.2
Thecc.09G185600 Theobroma cacao HOM05D005029 ORTHO05D006052 5.7e-79 298.5 306 57.5
Manes.06G020200 Manihot esculenta HOM05D005029 ORTHO05D006052 1.3e-78 297.4 302 59.6
CiPaw.07G196600 Carya illinoinensis HOM05D005029 ORTHO05D006052 1.7e-78 297.0 315 58.7
MSTRG.26542 Avicennia marina HOM05D005029 ORTHO05D006052 2.2e-78 296.6 303 57.1
Cfa013448 Carpinus fangiana HOM05D005029 ORTHO05D006052 2.8e-78 296.2 300 59.3
Actinidia01279 Actinidia chinensis HOM05D005029 ORTHO05D006052 1.8e-77 293.5 282 66.3
Gohir.A13G208700 Gossypium hirsutum HOM05D005029 ORTHO05D006052 1.8e-77 293.5 305 57.7
Potri.006G075900 Populus trichocarpa HOM05D005029 ORTHO05D006052 7.0e-77 291.6 307 61.2
Prupe.1G076300 Prunus persica HOM05D005029 ORTHO05D006052 3.5e-76 289.3 309 60.2
TAR383G0036 Trochodendron aralioides HOM05D005029 ORTHO05D006052 5.9e-76 288.5 297 58.6
DCAR_030818 Daucus carota HOM05D005029 ORTHO05D006052 6.6e-75 285.0 277 62.5
TWI32G0396 Tripterygium wilfordii HOM05D005029 ORTHO05D006052 1.9e-74 283.5 308 59.7
GSVIVG01010867001 Vitis vinifera HOM05D005029 ORTHO05D006052 5.5e-74 282.0 281 63.7
MD16G1249500 Malus domestica HOM05D005029 ORTHO05D006052 1.6e-73 280.4 307 59.9
CANSAT11G1104 Cannabis sativa HOM05D005029 ORTHO05D006052 2.1e-73 280.0 308 59.4
TAR626G1810 Trochodendron aralioides HOM05D005029 ORTHO05D006052 2.8e-73 279.6 297 56.6
Glyma.15G165600 Glycine max HOM05D005029 ORTHO05D006052 6.1e-73 278.5 276 58.0
Lj6g0016757 Lotus japonicus HOM05D005029 ORTHO05D006052 6.1e-73 278.5 267 63.3
Lalb_Chr11g0074801 Lupinus albus HOM05D005029 ORTHO05D006052 1.8e-72 276.9 278 60.1
HanXRQChr13g0426591 Helianthus annuus HOM05D005029 ORTHO05D006052 2.3e-72 276.6 275 62.9
AUR62021347 Chenopodium quinoa HOM05D005029 ORTHO05D006052 1.2e-71 274.2 307 57.3
Nn7g36649 Nelumbo nucifera HOM05D005029 ORTHO05D006052 1.2e-71 274.2 281 57.7
Sabra18G0116800 Salix brachista HOM05D005029 ORTHO05D006052 1.2e-71 274.2 304 55.3
Potri.018G143000 Populus trichocarpa HOM05D005029 ORTHO05D006052 1.5e-71 273.9 304 55.6
TWI34G0612 Tripterygium wilfordii HOM05D005029 ORTHO05D006052 2.0e-71 273.5 305 58.4
Sabra06G0056600 Salix brachista HOM05D005029 ORTHO05D006052 2.6e-71 273.1 337 52.5
Glyma.09G059300 Glycine max HOM05D005029 ORTHO05D006052 3.4e-71 272.7 276 55.8
EL10Ac8g18332 Beta vulgaris HOM05D005029 ORTHO05D006052 7.5e-71 271.6 306 54.9
Phvul.009G236500 Phaseolus vulgaris HOM05D005029 ORTHO05D006052 9.8e-71 271.2 276 55.4
FvH4_4g07340 Fragaria vesca HOM05D005029 ORTHO05D006052 1.3e-70 270.8 283 59.4
AUR62033261 Chenopodium quinoa HOM05D005029 ORTHO05D006052 3.7e-70 269.2 308 57.1
VMungo1309G1415 Vigna mungo HOM05D005029 ORTHO05D006052 3.7e-70 269.2 277 56.3
Ciclev10009010m.g Citrus clementina HOM05D005029 ORTHO05D006052 4.9e-70 268.9 272 64.3
SGA_v2.0_scaffold31G12759 Striga asiatica HOM05D005029 ORTHO05D006052 1.4e-69 267.3 284 57.0
arahy.Tifrunner.gnm1.ann1.K38ATV Arachis hypogaea HOM05D005029 ORTHO05D006052 1.8e-69 266.9 306 62.7
FAN12G1304 Fragaria x ananassa HOM05D005029 ORTHO05D006052 2.4e-69 266.5 281 59.1
Medtr2g037940 Medicago truncatula HOM05D005029 ORTHO05D006052 3.1e-69 266.2 278 57.6
THA.LOC104803957 Tarenaya hassleriana HOM05D005029 ORTHO05D006052 3.1e-69 266.2 305 60.0
THA.LOC104803983 Tarenaya hassleriana HOM05D005029 ORTHO05D006052 3.1e-69 266.2 305 60.0
Migut.L01885 Erythranthe guttata HOM05D005029 ORTHO05D006052 1.2e-68 264.2 282 63.1
PSO063G5693 Papaver somniferum HOM05D005029 ORTHO05D006052 2.0e-68 263.5 281 57.3
Psat1g145480 Pisum sativum HOM05D005029 ORTHO05D006052 2.0e-68 263.5 263 58.6
PSO170G2568 Papaver somniferum HOM05D005029 ORTHO05D006052 2.7e-68 263.1 305 54.4
Lsat_1_v5_gn_3_137280 Lactuca sativa HOM05D005029 ORTHO05D006052 3.5e-68 262.7 277 58.5
RcHm_v2.0_Chr4g0399711 Rosa chinensis HOM05D005029 ORTHO05D006052 7.8e-68 261.5 281 58.7
QL02p046501 Quercus lobata HOM05D005029 ORTHO05D006052 1.0e-67 261.2 406 46.1
Hund26310 Selenicereus undatus HOM05D005029 ORTHO05D006052 1.3e-67 260.8 275 59.6
FAN07G2409 Fragaria x ananassa HOM05D005029 ORTHO05D006052 1.7e-67 260.4 269 54.6
Sc16g0010440 Simmondsia chinensis HOM05D005029 ORTHO05D006052 2.3e-67 260.0 273 60.8
Dinv25437 Davidia involucrata HOM05D005029 ORTHO05D006052 3.8e-67 259.2 286 56.3
Oeu034799.1 Olea europaea HOM05D005029 ORTHO05D006052 5.0e-67 258.8 251 60.2
MBI19_g21652_MAGBIO Magnolia biondii HOM05D005029 ORTHO05D006052 1.9e-66 256.9 280 56.1
FAN22G0020 Fragaria x ananassa HOM05D005029 ORTHO05D006052 2.5e-66 256.5 273 58.2
Eucgr.C00120 Eucalyptus grandis HOM05D005029 ORTHO05D006052 1.6e-65 253.8 284 55.3
FAN17G0071 Fragaria x ananassa HOM05D005029 ORTHO05D006052 1.6e-65 253.8 298 55.0
MBI13_g01742_MAGBIO Magnolia biondii HOM05D005029 ORTHO05D006052 2.1e-65 253.4 280 56.8
Nn2g14879 Nelumbo nucifera HOM05D005029 ORTHO05D006052 2.8e-65 253.1 279 57.7
Ca_02102_v3 Cicer arietinum L. HOM05D005029 ORTHO05D006052 6.1e-65 251.9 233 60.5
THA.LOC104814654 Tarenaya hassleriana HOM05D005029 ORTHO05D006052 1.2e-63 247.7 309 59.2
TPR.G7936 Trifolium pratense HOM05D005029 ORTHO05D006052 5.8e-63 245.4 281 58.0
Aqoxy7G02787 Aquilegia oxysepala HOM05D005029 ORTHO05D006052 7.5e-63 245.0 265 58.1
Atru.chr7.763 Acer truncatum HOM05D005029 ORTHO05D006052 9.8e-63 244.6 305 53.8
Atru.chr7.783 Acer truncatum HOM05D005029 ORTHO05D006052 9.8e-63 244.6 305 53.8
BolC3t21207H Brassica oleracea HOM05D005029 ORTHO05D006052 1.9e-61 240.4 301 55.1
Carub.0007s1068 Capsella rubella HOM05D005029 ORTHO05D006052 7.0e-61 238.4 305 52.5
CsaV3_1G031840 Cucumis sativus L. HOM05D005029 ORTHO05D006052 7.0e-61 238.4 261 55.9
Ah.14g083530 Amaranthus hybridus HOM05D005029 ORTHO05D006052 9.2e-61 238.0 306 54.2
MELO3C017433.2 Cucumis melo HOM05D005029 ORTHO05D006052 2.7e-60 236.5 312 52.9
Sed0026503 Sechium edule HOM05D005029 ORTHO05D006052 7.8e-60 235.0 309 51.8
Ah.09g230060 Amaranthus hybridus HOM05D005029 ORTHO05D006052 1.3e-59 234.2 284 54.2
Sp7g27770 Schrenkiella parvula HOM05D005029 ORTHO05D006052 2.3e-59 233.4 302 51.0
CARHR237880 Cardamine hirsuta HOM05D005029 ORTHO05D006052 3.0e-59 233.0 305 54.4
Thhalv10025919m.g Eutrema salsugineum HOM05D005029 ORTHO05D006052 3.0e-59 233.0 302 54.0
ECA240G3783 Erigeron canadensis HOM05D005029 ORTHO05D006052 6.6e-59 231.9 233 61.8
BraA08t33909Z Brassica rapa HOM05D005029 ORTHO05D006052 8.6e-59 231.5 304 55.9
arahy.Tifrunner.gnm1.ann1.J7B49U Arachis hypogaea HOM05D005029 ORTHO05D006052 1.9e-58 230.3 160 76.2
BcaC01g01206 Brassica carinata HOM05D005029 ORTHO05D006052 4.3e-58 229.2 276 56.5
AL7G22280 Arabidopsis lyrata HOM05D005029 ORTHO05D006052 5.6e-58 228.8 305 50.8
AT4G29960 Arabidopsis thaliana HOM05D005029 ORTHO05D006052 7.3e-58 228.4 305 50.5
Oeu044675.2 Olea europaea HOM05D005029 ORTHO05D006052 8.0e-57 224.9 288 55.9
Aa31LG2G20590 Aethionema arabicum HOM05D005029 ORTHO05D006052 1.1e-56 224.6 311 48.6
CSS0012939 Camellia sinensis var. sinensis HOM05D005029 ORTHO05D006052 1.1e-56 224.6 314 54.5
A08p19470 Brassica napus HOM05D005029 ORTHO05D006052 3.4e-55 219.5 305 56.4
Lalb_Chr13g0300031 Lupinus albus HOM05D005029 ORTHO05D006052 3.4e-55 219.5 269 52.0
SHI09006 Sapria himalayana HOM05D005029 ORTHO05D006052 3.4e-55 219.5 231 52.8
ClCG06G013560 Citrullus lanatus HOM05D005029 ORTHO05D006052 1.1e-53 214.5 274 53.3
PGR142G1735 Punica granatum HOM05D005029 ORTHO05D006052 5.4e-53 212.2 270 60.4
BcaNung00506 Brassica carinata HOM05D005029 ORTHO05D006052 7.0e-53 211.8 304 51.6
unitig_699.g19404 Utricularia gibba HOM05D005029 ORTHO05D006052 1.7e-51 207.2 281 45.9
BcaC09g51777 Brassica carinata HOM05D000106 ORTHO05D000160 3.0e-51 206.5 251 57.8
C03p88970 Brassica napus HOM05D005029 ORTHO05D006052 1.9e-50 203.8 248 60.5
BcaC09g51764 Brassica carinata HOM05D005029 ORTHO05D006052 2.5e-50 203.4 253 57.3
C01p09110 Brassica napus HOM05D005029 ORTHO05D006052 9.5e-50 201.4 251 57.8
BolC1t00902H Brassica oleracea HOM05D005029 ORTHO05D006052 9.5e-50 201.4 308 51.3
CDE04G3679 Ceratophyllum demersum HOM05D005029 ORTHO05D006052 2.8e-49 199.9 269 50.6
A01p08140 Brassica napus HOM05D005029 ORTHO05D006052 2.3e-48 196.8 309 52.8
unitig_27.g24759 Utricularia gibba HOM05D005029 ORTHO05D006052 3.1e-48 196.4 303 44.6
BcaC07g37961 Brassica carinata HOM05D005029 ORTHO05D006052 1.2e-47 194.5 302 48.7
BraA01t00761Z Brassica rapa HOM05D005029 ORTHO05D006052 2.0e-47 193.7 310 50.6
ATR0626G110 Amborella trichopoda HOM05D005029 ORTHO05D006052 4.4e-47 192.6 263 46.0
CDE02G0552 Ceratophyllum demersum HOM05D005029 ORTHO05D006052 9.9e-47 191.4 265 53.2
Duzib168G1982 Durio zibethinus HOM05D005029 ORTHO05D006052 4.6e-44 182.6 154 66.2
Rhsim01G0118000 Rhododendron simsii HOM05D005029 ORTHO05D006052 1.7e-43 180.6 230 46.5
Lj5A672T26 Lonicera japonica HOM05D005029 ORTHO05D006052 9.5e-42 174.9 163 63.2
Migut.J00802 Erythranthe guttata HOM05D005029 ORTHO05D006052 1.2e-39 167.9 280 46.1
HPP92_004703 Vanilla planifolia HOM05D005029 ORTHO05D006052 2.0e-39 167.2 249 47.4
AagrBONN_evm.TU.Sc2ySwM_368.2110 Anthoceros agrestis HOM05D005029 ORTHO05D006052 3.2e-37 159.8 275 40.0
Mapoly0076s0086 Marchantia polymorpha HOM05D005029 ORTHO05D006052 7.1e-37 158.7 288 38.5
C07p57380 Brassica napus HOM05D005029 ORTHO05D006052 6.0e-36 155.6 162 59.9
SEGI_23735 Sequoiadendron giganteum HOM05D005029 ORTHO05D006052 1.1e-34 151.4 266 40.6
Os04g0606800 Oryza sativa ssp. japonica HOM05D005029 ORTHO05D006052 7.3e-34 148.7 254 43.3
Zm00001eb071460 Zea mays HOM05D005029 ORTHO05D006052 7.3e-34 148.7 258 42.6
Zm00001eb430500 Zea mays HOM05D005029 ORTHO05D006052 7.6e-31 138.7 255 42.4
SMO358G0278 Selaginella moellendorffii HOM05D005029 ORTHO05D006052 6.0e-28 129.0 256 37.9
Pp3c9_8340 Physcomitrium patens HOM05D005029 ORTHO05D006052 3.0e-27 126.7 282 34.8
A03p59350 Brassica napus HOM05D005029 ORTHO05D006052 5.8e-23 112.5 144 51.4
BcaB06g28011 Brassica carinata HOM05D005029 ORTHO05D006052 7.6e-23 112.1 91 65.9
BcaC05g25672 Brassica carinata HOM05D005029 ORTHO05D006052 2.4e-21 107.1 211 48.8
BolC6t39910H Brassica oleracea HOM05D005029 ORTHO05D006052 2.4e-16 90.5 173 38.7
vmacro20818 Vaccinium macrocarpon HOM05D005029 ORTHO05D006052 7.1e-13 79.0 71 57.7
Pp3c9_14880 Physcomitrium patens HOM05D005029 ORTHO05D006052 2.3e-11 73.9 118 37.3
Lj5C672T2 Lonicera japonica HOM05D005029 ORTHO05D006052 1.9e-10 70.9 66 57.6
CBR_g52634 Chara braunii HOM05D005029 ORTHO05D006052 2.5e-10 70.5 109 42.2
BcaB04g18770 Brassica carinata HOM05D005029 ORTHO05D006052 1.5e-07 61.2 39 82.1


User provided reference genes

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