Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g003690 Solanum pennellii HOM05D006754 ORTHO05D008403 5.2e-237 823.9 401 100.0
Solyc07g007700.3 Solanum lycopersicum HOM05D006754 ORTHO05D008403 9.2e-234 813.1 401 98.8
PGSC0003DMG400030707 Solanum tuberosum HOM05D006754 ORTHO05D008403 4.9e-227 790.8 401 95.0
CAN.G969.5 Capsicum annuum HOM05D006754 ORTHO05D008403 6.5e-187 657.5 405 78.5
Nitab4.5_0007132g0020 Nicotiana tabacum HOM05D006754 ORTHO05D008403 9.4e-154 547.4 292 88.0
Peaxi162Scf00122g00144 Petunia axillaris HOM05D006754 ORTHO05D008403 1.4e-149 533.5 399 66.7
CSS0026926 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 2.7e-148 529.3 387 64.9
CSS0030688 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 7.7e-148 527.7 386 64.5
Nitab4.5_0000272g0070 Nicotiana tabacum HOM05D006754 ORTHO05D008403 5.0e-147 525.0 271 89.3
Hma1.2p1_0615F.1_g189790 Hydrangea macrophylla HOM05D006754 ORTHO05D008403 2.2e-142 509.6 401 62.3
Potri.009G033700 Populus trichocarpa HOM05D006754 ORTHO05D008403 2.1e-137 493.0 415 59.3
QL01p030969 Quercus lobata HOM05D006754 ORTHO05D008403 2.1e-137 493.0 402 62.9
Cc01_g13150 Coffea canephora HOM05D006754 ORTHO05D008403 8.9e-136 487.6 405 60.0
FAN11G1342 Fragaria x ananassa HOM05D006754 ORTHO05D008403 1.2e-135 487.3 400 61.5
Oeu026710.1 Olea europaea HOM05D006754 ORTHO05D008403 3.4e-135 485.7 431 58.2
FvH4_3g36800 Fragaria vesca HOM05D006754 ORTHO05D008403 4.4e-135 485.3 396 61.6
FAN25G2379 Fragaria x ananassa HOM05D006754 ORTHO05D008403 4.9e-134 481.9 395 61.3
Lj2P1066T40 Lonicera japonica HOM05D006754 ORTHO05D008403 6.4e-134 481.5 418 56.7
Migut.F00608 Erythranthe guttata HOM05D006754 ORTHO05D008403 1.4e-133 480.3 410 60.0
RcHm_v2.0_Chr5g0065861 Rosa chinensis HOM05D006754 ORTHO05D008403 1.8e-133 479.9 325 69.2
Atru.chr3.3972 Acer truncatum HOM05D006754 ORTHO05D008403 3.2e-133 479.2 329 67.2
Nn8g38772 Nelumbo nucifera HOM05D006754 ORTHO05D008403 5.4e-133 478.4 411 60.1
Ciclev10030407m.g Citrus clementina HOM05D006754 ORTHO05D008403 9.2e-133 477.6 402 58.0
CiPaw.14G067200 Carya illinoinensis HOM05D006754 ORTHO05D008403 5.9e-132 474.9 404 59.9
MSTRG.21206 Avicennia marina HOM05D006754 ORTHO05D008403 3.9e-131 472.2 426 57.5
MD03G1088200 Malus domestica HOM05D006754 ORTHO05D008403 3.9e-131 472.2 409 59.9
TWI79G1092 Tripterygium wilfordii HOM05D006754 ORTHO05D008403 2.5e-130 469.5 407 58.0
Potri.001G242400 Populus trichocarpa HOM05D006754 ORTHO05D008403 3.3e-130 469.2 420 56.7
Haze_24130 Corylus avellana HOM05D006754 ORTHO05D008403 5.6e-130 468.4 404 60.1
Sabra16G0147200 Salix brachista HOM05D006754 ORTHO05D008403 5.6e-130 468.4 408 57.6
SalBow7G4834 Salvia bowleyana HOM05D006754 ORTHO05D008403 1.6e-129 466.8 404 59.2
FAN16G0425 Fragaria x ananassa HOM05D006754 ORTHO05D008403 2.8e-129 466.1 378 60.8
SalBow7G2225 Salvia bowleyana HOM05D006754 ORTHO05D008403 3.6e-129 465.7 404 58.9
COL.COLO4_18549 Corchorus olitorius HOM05D006754 ORTHO05D008403 4.7e-129 465.3 403 58.1
Aqoxy2G02260 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 8.9e-128 461.1 391 58.6
Thecc.09G318400 Theobroma cacao HOM05D006754 ORTHO05D008403 5.8e-127 458.4 405 56.8
Glyma.15G221700 Glycine max HOM05D006754 ORTHO05D008403 7.5e-127 458.0 403 58.6
Glyma.08G227600 Glycine max HOM05D006754 ORTHO05D008403 1.3e-126 457.2 402 57.5
Cpa.g.sc81.116 Carica papaya HOM05D006754 ORTHO05D008403 1.7e-126 456.8 399 55.6
Prupe.6G072500 Prunus persica HOM05D006754 ORTHO05D008403 2.2e-126 456.4 390 59.0
VMungo1127G1194 Vigna mungo HOM05D006754 ORTHO05D008403 2.2e-126 456.4 401 58.1
PGR102G0280 Punica granatum HOM05D006754 ORTHO05D008403 8.3e-126 454.5 357 60.2
Gohir.A05G094100 Gossypium hirsutum HOM05D006754 ORTHO05D008403 1.4e-125 453.8 402 57.2
THA.LOC104799439 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 1.4e-125 453.8 405 58.0
CsaV3_1G034490 Cucumis sativus L. HOM05D006754 ORTHO05D008403 1.9e-125 453.4 387 58.7
DCAR_005953 Daucus carota HOM05D006754 ORTHO05D008403 1.9e-125 453.4 347 62.2
Ca_24122_v3 Cicer arietinum L. HOM05D006754 ORTHO05D008403 4.1e-125 452.2 407 57.2
PSO339G3555 Papaver somniferum HOM05D006754 ORTHO05D008403 4.6e-124 448.7 389 58.4
Gorai.009G097800 Gossypium raimondii HOM05D006754 ORTHO05D008403 7.8e-124 448.0 402 56.7
Manes.01G171100 Manihot esculenta HOM05D006754 ORTHO05D008403 1.3e-123 447.2 328 64.9
Phvul.011G187300 Phaseolus vulgaris HOM05D006754 ORTHO05D008403 1.7e-123 446.8 404 57.4
Psat4g178480 Pisum sativum HOM05D006754 ORTHO05D008403 1.7e-123 446.8 409 55.7
EL10Ac7g16047 Beta vulgaris HOM05D006754 ORTHO05D008403 5.0e-123 445.3 400 56.8
PSO063G1099 Papaver somniferum HOM05D006754 ORTHO05D008403 5.0e-123 445.3 390 59.0
Eucgr.B02322 Eucalyptus grandis HOM05D006754 ORTHO05D008403 6.6e-123 444.9 328 64.3
Lsat_1_v5_gn_8_73421 Lactuca sativa HOM05D006754 ORTHO05D008403 1.5e-122 443.7 319 64.3
HanXRQChr05g0135011 Helianthus annuus HOM05D006754 ORTHO05D008403 2.5e-122 443.0 306 65.7
unitig_37.g12673 Utricularia gibba HOM05D006754 ORTHO05D008403 2.8e-121 439.5 302 67.5
Lj3g0006516 Lotus japonicus HOM05D006754 ORTHO05D008403 3.1e-120 436.0 406 56.4
Medtr8g044030 Medicago truncatula HOM05D006754 ORTHO05D008403 3.1e-120 436.0 428 54.0
THA.LOC104814881 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 3.1e-120 436.0 408 55.1
ClCG03G001330 Citrullus lanatus HOM05D006754 ORTHO05D008403 5.8e-119 431.8 366 58.7
Ah.15g097770 Amaranthus hybridus HOM05D006754 ORTHO05D008403 7.5e-119 431.4 380 57.4
Sc12g0001320 Simmondsia chinensis HOM05D006754 ORTHO05D008403 1.3e-118 430.6 404 55.9
AT5G59500 Arabidopsis thaliana HOM05D006754 ORTHO05D008403 6.4e-118 428.3 408 53.4
Sed0002230 Sechium edule HOM05D006754 ORTHO05D008403 6.4e-118 428.3 366 59.6
arahy.Tifrunner.gnm1.ann1.826T7K Arachis hypogaea HOM05D006754 ORTHO05D008403 8.3e-118 427.9 411 55.0
AUR62001757 Chenopodium quinoa HOM05D006754 ORTHO05D008403 8.3e-118 427.9 381 57.2
FAN21G1313 Fragaria x ananassa HOM05D006754 ORTHO05D008403 2.4e-117 426.4 366 58.5
CARHR285870 Cardamine hirsuta HOM05D006754 ORTHO05D008403 5.4e-117 425.2 410 54.6
Thhalv10015639m.g Eutrema salsugineum HOM05D006754 ORTHO05D008403 5.4e-117 425.2 406 53.7
AL8G35980 Arabidopsis lyrata HOM05D006754 ORTHO05D008403 1.6e-116 423.7 404 54.0
Aa31LG1G11840 Aethionema arabicum HOM05D006754 ORTHO05D008403 6.6e-115 418.3 414 53.1
Sp6g21200 Schrenkiella parvula HOM05D006754 ORTHO05D008403 1.5e-114 417.2 328 60.7
Carub.0008s2018 Capsella rubella HOM05D006754 ORTHO05D008403 1.9e-114 416.8 418 51.4
BcaC04g19764 Brassica carinata HOM05D006754 ORTHO05D008403 4.3e-114 415.6 400 54.2
C09p51900 Brassica napus HOM05D006754 ORTHO05D008403 4.3e-114 415.6 400 54.2
BolC9t58053H Brassica oleracea HOM05D006754 ORTHO05D008403 4.3e-114 415.6 400 54.2
A10p16710 Brassica napus HOM05D006754 ORTHO05D008403 7.3e-114 414.8 400 54.0
BraA10t43752Z Brassica rapa HOM05D006754 ORTHO05D008403 2.8e-113 412.9 389 54.8
BcaB08g36252 Brassica carinata HOM05D006754 ORTHO05D008403 3.6e-113 412.5 406 52.5
CANSAT56G3630 Cannabis sativa HOM05D006754 ORTHO05D008403 3.6e-113 412.5 317 62.8
AUR62009543 Chenopodium quinoa HOM05D006754 ORTHO05D008403 3.6e-113 412.5 381 56.2
Dinv22095 Davidia involucrata HOM05D006754 ORTHO05D008403 4.0e-112 409.1 249 74.7
CDE04G0725 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 3.4e-111 406.0 324 59.3
MBI14_g12133_MAGBIO Magnolia biondii HOM05D006754 ORTHO05D008403 1.0e-107 394.4 321 60.1
SGA_v2.0_scaffold51G18718 Striga asiatica HOM05D006754 ORTHO05D008403 1.3e-107 394.0 407 49.4
CDE07G0060 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 2.3e-107 393.3 314 57.6
Duzib168G0850 Durio zibethinus HOM05D006754 ORTHO05D008403 2.8e-105 386.3 245 71.8
Oeu004165.1 Olea europaea HOM05D006754 ORTHO05D008403 1.4e-104 384.0 358 55.0
ATR0752G045 Amborella trichopoda HOM05D006754 ORTHO05D008403 9.9e-103 377.9 285 60.7
Sed0016816 Sechium edule HOM05D006754 ORTHO05D008403 6.6e-99 365.2 378 51.9
Dinv09390 Davidia involucrata HOM05D006754 ORTHO05D008403 2.2e-94 350.1 214 74.3
Gohir.D05G094600 Gossypium hirsutum HOM05D006754 ORTHO05D008403 1.0e-91 341.3 329 53.5
Lalb_Chr01g0007611 Lupinus albus HOM05D006754 ORTHO05D008403 1.4e-88 330.9 406 46.3
TPR.G35751 Trifolium pratense HOM05D006754 ORTHO05D008403 1.1e-69 268.1 402 41.0
GSVIVG01024926001 Vitis vinifera HOM05D006754 ORTHO05D008403 5.5e-69 265.8 402 40.0
ECA236G3563 Erigeron canadensis HOM05D006754 ORTHO05D008403 7.7e-63 245.4 149 72.5
Pp3c1_41830 Physcomitrium patens HOM05D006754 ORTHO05D008403 6.3e-57 225.7 300 37.3
Mapoly0044s0017 Marchantia polymorpha HOM05D006754 ORTHO05D008403 1.5e-50 204.5 379 33.8
AagrBONN_evm.TU.Sc2ySwM_368.2585 Anthoceros agrestis HOM05D006754 ORTHO05D008403 1.7e-49 201.1 298 37.6
Nn4g26458 Nelumbo nucifera HOM05D006754 ORTHO05D008403 7.7e-47 192.2 119 73.1
HPP92_027965 Vanilla planifolia HOM05D006754 ORTHO05D008403 8.5e-46 188.7 197 49.7
C03p13670 Brassica napus HOM05D006754 ORTHO05D008403 2.5e-45 187.2 131 69.5
BolC3t13816H Brassica oleracea HOM05D006754 ORTHO05D008403 2.5e-45 187.2 131 69.5
SMO356G0015 Selaginella moellendorffii HOM05D006754 ORTHO05D008403 2.0e-42 177.6 270 35.6
Aqoxy2G02265 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 1.3e-38 164.9 203 43.3
MD11G1097300 Malus domestica HOM05D006754 ORTHO05D008403 5.2e-35 152.9 199 44.7
BcaB05g22514 Brassica carinata HOM05D006754 ORTHO05D008403 9.8e-34 148.7 157 49.7
Dinv06263 Davidia involucrata HOM05D006754 ORTHO05D008403 3.5e-31 140.2 97 72.2
CBR_g46210 Chara braunii HOM05D006754 ORTHO05D008403 1.1e-29 135.2 313 30.0
HPP92_001678 Vanilla planifolia HOM05D006754 ORTHO05D008403 7.2e-29 132.5 146 47.9
SEGI_33641 Sequoiadendron giganteum HOM05D006754 ORTHO05D008403 1.6e-23 114.8 207 33.8
Cre01.g049750 Chlamydomonas reinhardtii HOM05D006754 ORTHO05D008403 1.1e-11 75.5 212 29.2
BcaC03g14007 Brassica carinata HOM05D006754 ORTHO05D008403 3.4e-10 70.5 94 46.8
C02p12450 Brassica napus HOM05D006754 ORTHO05D008403 4.4e-10 70.1 92 47.8


User provided reference genes

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