Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g003340 Solanum pennellii HOM05D007076 ORTHO05D008800 6.3e-140 500.7 251 100.0
Solyc07g007280.4 Solanum lycopersicum HOM05D007076 ORTHO05D008800 8.0e-135 483.8 252 97.6
PGSC0003DMG400030692 Solanum tuberosum HOM05D007076 ORTHO05D008800 1.5e-133 479.6 251 96.8
Nitab4.5_0003305g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 1.3e-121 439.9 256 87.5
Nitab4.5_0008829g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 4.7e-119 431.4 259 84.9
CAN.G728.2 Capsicum annuum HOM05D007076 ORTHO05D008800 2.0e-117 426.0 252 87.3
Peaxi162Scf00088g00017 Petunia axillaris HOM05D007076 ORTHO05D008800 3.4e-109 398.7 263 80.6
Oeu058595.1 Olea europaea HOM05D007076 ORTHO05D008800 1.3e-97 360.1 251 73.3
Lsat_1_v5_gn_7_46141 Lactuca sativa HOM05D007076 ORTHO05D008800 2.3e-97 359.4 254 71.7
MSTRG.19622 Avicennia marina HOM05D007076 ORTHO05D008800 3.0e-97 359.0 248 74.2
CiPaw.15G183500 Carya illinoinensis HOM05D007076 ORTHO05D008800 2.1e-95 352.8 251 70.1
HanXRQChr09g0243091 Helianthus annuus HOM05D007076 ORTHO05D008800 8.1e-95 350.9 244 70.9
CANSAT11G0571 Cannabis sativa HOM05D007076 ORTHO05D008800 1.1e-94 350.5 246 69.5
Thecc.09G139600 Theobroma cacao HOM05D007076 ORTHO05D008800 6.9e-94 347.8 249 72.3
Actinidia21919 Actinidia chinensis HOM05D007076 ORTHO05D008800 9.0e-94 347.4 256 68.0
Rhsim01G0051700 Rhododendron simsii HOM05D007076 ORTHO05D008800 2.0e-93 346.3 247 70.0
QL02p091054 Quercus lobata HOM05D007076 ORTHO05D008800 2.6e-93 345.9 253 70.4
GSVIVG01012872001 Vitis vinifera HOM05D007076 ORTHO05D008800 3.4e-93 345.5 207 78.7
Duzib168G1701 Durio zibethinus HOM05D007076 ORTHO05D008800 7.6e-93 344.4 249 69.9
TAR625G0498 Trochodendron aralioides HOM05D007076 ORTHO05D008800 7.6e-93 344.4 254 68.9
Gorai.009G013300 Gossypium raimondii HOM05D007076 ORTHO05D008800 1.3e-92 343.6 241 72.2
Migut.J01262 Erythranthe guttata HOM05D007076 ORTHO05D008800 2.2e-92 342.8 240 72.5
Prupe.7G256300 Prunus persica HOM05D007076 ORTHO05D008800 2.2e-92 342.8 231 72.7
Gohir.D05G013300 Gossypium hirsutum HOM05D007076 ORTHO05D008800 2.9e-92 342.4 241 72.2
Gohir.A05G012200 Gossypium hirsutum HOM05D007076 ORTHO05D008800 3.8e-92 342.0 241 71.4
PGR142G4145 Punica granatum HOM05D007076 ORTHO05D008800 4.9e-92 341.7 232 71.1
FAN26G2288 Fragaria x ananassa HOM05D007076 ORTHO05D008800 8.4e-92 340.9 227 74.0
vmacro21890 Vaccinium macrocarpon HOM05D007076 ORTHO05D008800 8.4e-92 340.9 258 68.2
TWI34G1052 Tripterygium wilfordii HOM05D007076 ORTHO05D008800 2.4e-91 339.3 243 70.8
Manes.14G120300 Manihot esculenta HOM05D007076 ORTHO05D008800 4.2e-91 338.6 249 69.1
Eucgr.C04107 Eucalyptus grandis HOM05D007076 ORTHO05D008800 9.3e-91 337.4 252 67.5
FvH4_1g01870 Fragaria vesca HOM05D007076 ORTHO05D008800 9.3e-91 337.4 227 73.1
FAN19G3087 Fragaria x ananassa HOM05D007076 ORTHO05D008800 9.3e-91 337.4 227 73.1
RcHm_v2.0_Chr2g0086841 Rosa chinensis HOM05D007076 ORTHO05D008800 9.3e-91 337.4 226 73.0
MD15G1161100 Malus domestica HOM05D007076 ORTHO05D008800 1.2e-90 337.0 249 69.1
FAN23G1541 Fragaria x ananassa HOM05D007076 ORTHO05D008800 2.7e-90 335.9 223 73.5
Nn1g00072 Nelumbo nucifera HOM05D007076 ORTHO05D008800 3.5e-90 335.5 254 67.7
DCAR_017767 Daucus carota HOM05D007076 ORTHO05D008800 4.6e-90 335.1 256 67.6
Cc06_g07520 Coffea canephora HOM05D007076 ORTHO05D008800 1.3e-89 333.6 299 61.2
Sed0007180 Sechium edule HOM05D007076 ORTHO05D008800 1.7e-89 333.2 254 66.1
COL.COLO4_24128 Corchorus olitorius HOM05D007076 ORTHO05D008800 8.7e-89 330.9 199 78.9
Lalb_Chr07g0179431 Lupinus albus HOM05D007076 ORTHO05D008800 1.1e-88 330.5 247 68.4
ClCG06G011950 Citrullus lanatus HOM05D007076 ORTHO05D008800 1.9e-88 329.7 211 73.9
Glyma.17G106200 Glycine max HOM05D007076 ORTHO05D008800 3.3e-88 328.9 246 67.5
Nn2g12218 Nelumbo nucifera HOM05D007076 ORTHO05D008800 4.3e-88 328.6 246 68.3
Potri.006G060100 Populus trichocarpa HOM05D007076 ORTHO05D008800 7.3e-88 327.8 233 69.5
Glyma.13G164900 Glycine max HOM05D007076 ORTHO05D008800 9.6e-88 327.4 250 67.6
Cfa020904 Carpinus fangiana HOM05D007076 ORTHO05D008800 1.3e-87 327.0 253 68.0
CsaV3_1G028410 Cucumis sativus L. HOM05D007076 ORTHO05D008800 2.8e-87 325.9 251 65.7
MELO3C010270.2 Cucumis melo HOM05D007076 ORTHO05D008800 6.2e-87 324.7 248 65.7
VMungo1215G2969 Vigna mungo HOM05D007076 ORTHO05D008800 6.2e-87 324.7 205 74.1
Ca_21630_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 8.1e-87 324.3 205 73.7
Ca_30692_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 8.1e-87 324.3 205 73.7
BcaC02g06997 Brassica carinata HOM05D007076 ORTHO05D008800 1.1e-86 323.9 232 68.5
A04p35120 Brassica napus HOM05D007076 ORTHO05D008800 1.8e-86 323.2 200 75.0
BraA04t18948Z Brassica rapa HOM05D007076 ORTHO05D008800 1.8e-86 323.2 200 75.0
Sabra06G0043400 Salix brachista HOM05D000638 ORTHO05D000801 6.9e-86 321.2 207 73.9
BcaB06g29501 Brassica carinata HOM05D007076 ORTHO05D008800 9.0e-86 320.9 200 75.5
AUR62041461 Chenopodium quinoa HOM05D007076 ORTHO05D008800 9.0e-86 320.9 250 66.0
Aa31LG1G29340 Aethionema arabicum HOM05D007076 ORTHO05D008800 2.0e-85 319.7 202 73.3
AL4G47500 Arabidopsis lyrata HOM05D007076 ORTHO05D008800 2.0e-85 319.7 200 77.5
THA.LOC104817530 Tarenaya hassleriana HOM05D007076 ORTHO05D008800 2.6e-85 319.3 244 66.0
BolC4t28783H Brassica oleracea HOM05D007076 ORTHO05D008800 7.6e-85 317.8 233 68.2
CARHR143300 Cardamine hirsuta HOM05D007076 ORTHO05D008800 7.6e-85 317.8 204 74.5
Lj4g0004831 Lotus japonicus HOM05D007076 ORTHO05D008800 9.9e-85 317.4 250 66.8
Ciclev10009248m.g Citrus clementina HOM05D007076 ORTHO05D008800 1.3e-84 317.0 253 63.6
Thhalv10001598m.g Eutrema salsugineum HOM05D007076 ORTHO05D008800 1.3e-84 317.0 197 75.6
Medtr4g116350 Medicago truncatula HOM05D007076 ORTHO05D008800 4.9e-84 315.1 247 64.8
SalBow1G5229 Salvia bowleyana HOM05D007076 ORTHO05D008800 8.4e-84 314.3 249 64.7
Cpa.g.sc46.76 Carica papaya HOM05D007076 ORTHO05D008800 1.4e-83 313.5 246 66.3
TPR.G15804 Trifolium pratense HOM05D007076 ORTHO05D008800 5.4e-83 311.6 229 66.4
MBI14_g03617_MAGBIO Magnolia biondii HOM05D007076 ORTHO05D008800 7.1e-83 311.2 271 61.3
Carub.0004s3063 Capsella rubella HOM05D007076 ORTHO05D008800 9.3e-83 310.8 244 63.5
Dinv41435 Davidia involucrata HOM05D007076 ORTHO05D008800 1.6e-82 310.1 223 69.1
PSO170G2339 Papaver somniferum HOM05D007076 ORTHO05D008800 2.7e-82 309.3 245 63.3
Ah.00g000030 Amaranthus hybridus HOM05D007076 ORTHO05D008800 3.5e-82 308.9 255 63.5
PSO017G3183 Papaver somniferum HOM05D007076 ORTHO05D008800 4.6e-82 308.5 233 66.5
Sp4g29830 Schrenkiella parvula HOM05D007076 ORTHO05D008800 6.0e-82 308.1 203 70.9
Aqoxy7G02462 Aquilegia oxysepala HOM05D007076 ORTHO05D008800 7.9e-82 307.8 235 66.8
EL10Ac8g18804 Beta vulgaris HOM05D007076 ORTHO05D008800 1.5e-80 303.5 218 69.3
FAN28G0280 Fragaria x ananassa HOM05D007076 ORTHO05D008800 9.6e-80 300.8 221 68.8
Psat7g049360 Pisum sativum HOM05D007076 ORTHO05D008800 1.3e-79 300.4 251 64.1
Phvul.003G173400 Phaseolus vulgaris HOM05D007076 ORTHO05D008800 2.1e-79 299.7 177 78.0
CDE05G2705 Ceratophyllum demersum HOM05D007076 ORTHO05D008800 8.1e-79 297.7 231 63.2
Lj9A706G31 Lonicera japonica HOM05D007076 ORTHO05D008800 1.8e-78 296.6 170 81.2
Os08g0167500 Oryza sativa ssp. japonica HOM05D007076 ORTHO05D008800 1.8e-78 296.6 202 70.3
ECA240G2388 Erigeron canadensis HOM05D007076 ORTHO05D008800 4.0e-78 295.4 169 79.3
Atru.chr7.279 Acer truncatum HOM05D007076 ORTHO05D008800 6.9e-78 294.7 188 73.4
C04p73020 Brassica napus HOM05D007076 ORTHO05D008800 2.6e-77 292.7 168 81.5
ATR0681G287 Amborella trichopoda HOM05D007076 ORTHO05D008800 3.4e-77 292.4 201 69.7
AT2G47910 Arabidopsis thaliana HOM05D007076 ORTHO05D008800 1.0e-76 290.8 184 76.6
Haze_19333 Corylus avellana HOM05D007076 ORTHO05D008800 2.2e-76 289.7 253 61.7
Zm00001eb172070 Zea mays HOM05D007076 ORTHO05D008800 3.5e-74 282.3 205 66.8
arahy.Tifrunner.gnm1.ann1.W7VCER Arachis hypogaea HOM05D007076 ORTHO05D008800 4.6e-74 282.0 243 60.9
Atru.BG.23.p Acer truncatum HOM05D007076 ORTHO05D008800 1.6e-71 273.5 169 77.5
Duzib187G0567 Durio zibethinus HOM05D007076 ORTHO05D008800 3.7e-71 272.3 170 75.9
unitig_37.g12628 Utricularia gibba HOM05D007076 ORTHO05D008800 1.8e-65 253.4 230 56.5
arahy.Tifrunner.gnm1.ann1.80N34X Arachis hypogaea HOM05D007076 ORTHO05D008800 1.3e-63 247.3 250 55.2
AUR62011242 Chenopodium quinoa HOM05D007076 ORTHO05D008800 1.3e-60 237.3 254 54.7
Nn3g21909 Nelumbo nucifera HOM05D007076 ORTHO05D008800 4.2e-59 232.3 177 66.1
Nn1g04045 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.8e-57 226.9 139 77.0
SMO119G0333 Selaginella moellendorffii HOM05D007076 ORTHO05D008800 1.4e-54 217.2 171 56.7
Mapoly0095s0056 Marchantia polymorpha HOM05D007076 ORTHO05D008800 3.8e-52 209.1 248 47.2
Pp3c22_2510 Physcomitrium patens HOM05D007076 ORTHO05D008800 9.4e-51 204.5 260 44.6
Migut.J01256 Erythranthe guttata HOM05D007076 ORTHO05D008800 8.8e-41 171.4 170 57.6
AagrBONN_evm.TU.Sc2ySwM_362.135 Anthoceros agrestis HOM05D007076 ORTHO05D008800 2.2e-36 156.8 149 50.3
Oeu028011.1 Olea europaea HOM05D007076 ORTHO05D008800 5.5e-27 125.6 170 46.5
Nn1g02289 Nelumbo nucifera HOM05D007076 ORTHO05D008800 2.6e-24 116.7 75 74.7
CSS0010696 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 1.0e-20 104.8 63 74.6
MD02G1016600 Malus domestica HOM05D007076 ORTHO05D008800 2.3e-20 103.6 207 35.3
CSS0049676 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 7.3e-19 98.6 59 74.6
Nn1g02288 Nelumbo nucifera HOM05D007076 ORTHO05D008800 4.0e-17 92.8 74 60.8
CBR_g8382 Chara braunii HOM05D007076 ORTHO05D008800 3.6e-10 69.7 62 50.0


User provided reference genes

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