Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g003330 Solanum pennellii HOM05D007673 ORTHO05D009278 6.1e-68 260.8 138 100.0
Solyc07g007270.3 Solanum lycopersicum HOM05D007673 ORTHO05D009278 6.7e-67 257.3 138 96.4
PGSC0003DMG400030693 Solanum tuberosum HOM05D007673 ORTHO05D009278 2.1e-60 235.7 139 90.6
CAN.G877.9 Capsicum annuum HOM05D007673 ORTHO05D009278 7.0e-40 167.5 147 70.1
Nitab4.5_0008829g0020 Nicotiana tabacum HOM05D007673 ORTHO05D009278 1.4e-27 126.7 166 56.0
Peaxi162Scf00088g00016 Petunia axillaris HOM05D007673 ORTHO05D009278 3.4e-26 122.1 161 54.0
Nitab4.5_0003305g0020 Nicotiana tabacum HOM05D007673 ORTHO05D009278 3.2e-24 115.5 143 55.2
Dinv41432 Davidia involucrata HOM05D007673 ORTHO05D009278 3.6e-20 102.1 162 45.7
Dinv43178 Davidia involucrata HOM05D007673 ORTHO05D009278 6.4e-17 91.3 154 40.9
CSS0039366 Camellia sinensis var. sinensis HOM05D007673 ORTHO05D009278 1.1e-16 90.5 151 43.0
TAR383G0338 Trochodendron aralioides HOM05D007673 ORTHO05D009278 5.4e-16 88.2 164 39.6
Cc06_g07510 Coffea canephora HOM05D007673 ORTHO05D009278 7.0e-16 87.8 170 43.5
Peaxi162Scf00108g00316 Petunia axillaris HOM05D007673 ORTHO05D009278 3.5e-15 85.5 148 48.6
TAR625G1436 Trochodendron aralioides HOM05D007673 ORTHO05D009278 3.5e-15 85.5 160 43.1
Aqoxy7G03558 Aquilegia oxysepala HOM05D007673 ORTHO05D009278 4.6e-15 85.1 117 44.4
Nn8g39681 Nelumbo nucifera HOM05D007673 ORTHO05D009278 4.6e-15 85.1 131 45.8
MBI14_g03622_MAGBIO Magnolia biondii HOM05D007673 ORTHO05D009278 1.7e-14 83.2 118 45.8
Rhsim01G0051900 Rhododendron simsii HOM05D007673 ORTHO05D009278 2.3e-14 82.8 109 45.9
CiPaw.16G118400 Carya illinoinensis HOM05D007673 ORTHO05D009278 3.0e-14 82.4 165 41.2
Nn2g12220 Nelumbo nucifera HOM05D007673 ORTHO05D009278 6.6e-14 81.3 116 46.6
Sabra06G0043300 Salix brachista HOM05D007673 ORTHO05D009278 7.3e-13 77.8 165 36.4
Actinidia04238 Actinidia chinensis HOM05D007673 ORTHO05D009278 9.5e-13 77.4 152 40.1
Actinidia21918 Actinidia chinensis HOM05D007673 ORTHO05D009278 1.6e-12 76.6 150 40.0
GSVIVG01012874001 Vitis vinifera HOM05D007673 ORTHO05D009278 2.1e-12 76.3 115 46.1
Potri.006G060000 Populus trichocarpa HOM05D007673 ORTHO05D009278 1.4e-11 73.6 164 37.8
MBI15_g28791_MAGBIO Magnolia biondii HOM05D007673 ORTHO05D009278 4.0e-11 72.0 107 40.2
Lsat_1_v5_gn_8_63020 Lactuca sativa HOM05D007673 ORTHO05D009278 5.2e-11 71.6 141 40.4
Manes.06G043400 Manihot esculenta HOM05D007673 ORTHO05D009278 6.8e-11 71.2 164 38.4
ECA240G3592 Erigeron canadensis HOM05D007673 ORTHO05D009278 8.9e-11 70.9 151 40.4
PSO170G6343 Papaver somniferum HOM05D007673 ORTHO05D009278 1.5e-10 70.1 109 42.2
Psat0s503g0080 Pisum sativum HOM05D007673 ORTHO05D009278 1.5e-10 70.1 156 33.3
Psat0s5432g0040 Pisum sativum HOM05D007673 ORTHO05D009278 1.5e-10 70.1 156 33.3
PSO017G0897 Papaver somniferum HOM05D007673 ORTHO05D009278 3.4e-10 68.9 107 43.0
Thecc.09G139900 Theobroma cacao HOM05D007673 ORTHO05D009278 4.4e-10 68.6 115 40.0
Eucgr.C04106 Eucalyptus grandis HOM05D007673 ORTHO05D009278 5.8e-10 68.2 99 43.4
Oeu051709.1 Olea europaea HOM05D007673 ORTHO05D009278 5.8e-10 68.2 151 40.4
Oeu055924.1 Olea europaea HOM05D007673 ORTHO05D009278 1.3e-09 67.0 157 40.1
HanXRQChr09g0243101 Helianthus annuus HOM05D007673 ORTHO05D009278 2.2e-09 66.2 150 38.0
ECA236G3490 Erigeron canadensis HOM05D007673 ORTHO05D009278 3.7e-09 65.5 138 38.4
COL.COLO4_24126 Corchorus olitorius HOM05D007673 ORTHO05D009278 6.4e-09 64.7 120 36.7
Prupe.7G256100 Prunus persica HOM05D007673 ORTHO05D009278 8.3e-09 64.3 135 36.3
CiPaw.15G183400 Carya illinoinensis HOM05D007673 ORTHO05D009278 2.4e-08 62.8 167 35.3
DCAR_017766 Daucus carota HOM05D007673 ORTHO05D009278 3.2e-08 62.4 105 41.9
Lj6g0015094 Lotus japonicus HOM05D007673 ORTHO05D009278 3.2e-08 62.4 101 38.6
Phvul.009G210216 Phaseolus vulgaris HOM05D007673 ORTHO05D009278 3.2e-08 62.4 105 39.0
DCAR_014921 Daucus carota HOM05D007673 ORTHO05D009278 1.2e-07 60.5 142 38.0
Lsat_1_v5_gn_7_45981 Lactuca sativa HOM05D007673 ORTHO05D009278 1.2e-07 60.5 151 37.1
QL02p091069 Quercus lobata HOM05D007673 ORTHO05D009278 3.5e-07 58.9 167 29.9
EL10Ac8g18805 Beta vulgaris HOM05D022392 ORTHO05D009278 6.0e-07 58.2 112 36.6
CsaV3_1G028420 Cucumis sativus L. HOM05D007673 ORTHO05D009278 6.0e-07 58.2 103 40.8
AUR62041460 Chenopodium quinoa HOM05D022392 ORTHO05D009278 1.3e-06 57.0 109 38.5
Glyma.13G165000 Glycine max HOM05D007673 ORTHO05D009278 1.3e-06 57.0 155 29.0
TWI32G1294 Tripterygium wilfordii HOM05D007673 ORTHO05D009278 1.3e-06 57.0 106 40.6
Hund21601 Selenicereus undatus HOM05D022392 ORTHO05D009278 1.7e-06 56.6 143 34.3
VMungo1215G2163 Vigna mungo HOM05D007673 ORTHO05D009278 1.7e-06 56.6 147 28.6
FvH4_1g01840 Fragaria vesca HOM05D022859 ORTHO05D009278 2.3e-06 56.2 99 38.4
FAN28G1648 Fragaria x ananassa HOM05D022859 ORTHO05D009278 2.3e-06 56.2 99 38.4
Lalb_Chr07g0179441 Lupinus albus HOM05D007673 ORTHO05D009278 2.3e-06 56.2 161 31.1
Migut.K00385 Erythranthe guttata HOM05D007673 ORTHO05D009278 3.0e-06 55.8 84 40.5
Sed0013238 Sechium edule HOM05D007673 ORTHO05D009278 5.1e-06 55.1 124 35.5
MSTRG.6086 Avicennia marina HOM05D007673 ORTHO05D009278 6.6e-06 54.7 162 36.4
AUR62011243 Chenopodium quinoa HOM05D022392 ORTHO05D009278 8.6e-06 54.3 107 33.6
Lalb_Chr13g0301271 Lupinus albus HOM05D007673 ORTHO05D009278 8.6e-06 54.3 169 29.6


User provided reference genes

Program Settings