Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g002570 Solanum pennellii HOM05D007179 ORTHO05D009124 5.0e-73 277.7 144 100.0
Solyc07g006490.3 Solanum lycopersicum HOM05D007179 ORTHO05D009124 7.2e-72 273.9 144 97.2
PGSC0003DMG400027448 Solanum tuberosum HOM05D007179 ORTHO05D009124 2.9e-65 251.9 144 89.6
Peaxi162Scf00457g00318 Petunia axillaris HOM05D007179 ORTHO05D009124 1.0e-54 216.9 148 75.7
Nitab4.5_0011540g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 6.0e-42 174.5 139 69.8
CAN.G584.44 Capsicum annuum HOM05D007179 ORTHO05D009124 5.6e-40 167.9 110 80.0
MSTRG.26242 Avicennia marina HOM05D007179 ORTHO05D009124 7.5e-37 157.5 147 57.1
Dinv41297 Davidia involucrata HOM05D007179 ORTHO05D009124 8.3e-36 154.1 148 59.5
CSS0047035 Camellia sinensis var. sinensis HOM05D007179 ORTHO05D009124 1.4e-35 153.3 152 58.6
Oeu058831.1 Olea europaea HOM05D007179 ORTHO05D009124 9.2e-35 150.6 150 57.3
SalBow1G0390 Salvia bowleyana HOM05D007179 ORTHO05D009124 9.2e-35 150.6 149 56.4
CiPaw.07G187200 Carya illinoinensis HOM05D007179 ORTHO05D009124 2.1e-34 149.4 146 56.2
CANSAT11G0330 Cannabis sativa HOM05D007179 ORTHO05D009124 3.9e-33 145.2 146 56.8
Rhsim01G0010000 Rhododendron simsii HOM05D007179 ORTHO05D009124 3.9e-33 145.2 145 54.5
arahy.Tifrunner.gnm1.ann1.7FN6WP Arachis hypogaea HOM05D007179 ORTHO05D009124 3.3e-32 142.1 143 53.1
arahy.Tifrunner.gnm1.ann1.8TJD28 Arachis hypogaea HOM05D007179 ORTHO05D009124 4.3e-32 141.7 143 52.4
CiPaw.08G039500 Carya illinoinensis HOM05D007179 ORTHO05D009124 5.6e-32 141.4 146 55.5
Psat0s236g0160 Pisum sativum HOM05D007179 ORTHO05D009124 7.3e-32 141.0 143 53.1
Gohir.D05G007500 Gossypium hirsutum HOM05D007179 ORTHO05D009124 1.2e-31 140.2 141 53.9
Gorai.009G007600 Gossypium raimondii HOM05D007179 ORTHO05D009124 1.2e-31 140.2 141 53.9
Gohir.A05G006600 Gossypium hirsutum HOM05D007179 ORTHO05D009124 4.7e-31 138.3 141 53.2
MD16G1263600 Malus domestica HOM05D007179 ORTHO05D009124 1.1e-30 137.1 137 54.7
Medtr4g129320 Medicago truncatula HOM05D007179 ORTHO05D009124 1.8e-30 136.3 149 52.3
Migut.K00269 Erythranthe guttata HOM05D007179 ORTHO05D009124 3.1e-30 135.6 151 54.3
Thecc.09G162500 Theobroma cacao HOM05D007179 ORTHO05D009124 3.1e-30 135.6 140 52.1
Hund08993 Selenicereus undatus HOM05D007179 ORTHO05D009124 6.8e-30 134.4 122 55.7
Cpa.g.c29666.1 Carica papaya HOM05D007179 ORTHO05D009124 8.9e-30 134.0 124 56.5
Cc06_g13840 Coffea canephora HOM05D007179 ORTHO05D009124 8.9e-30 134.0 145 54.5
Nn1g04316 Nelumbo nucifera HOM05D007179 ORTHO05D009124 1.2e-29 133.7 145 51.7
Sed0008122 Sechium edule HOM05D007179 ORTHO05D009124 2.0e-29 132.9 116 57.8
C01p24450 Brassica napus HOM05D007179 ORTHO05D009124 2.6e-29 132.5 110 66.4
BolC1t02394H Brassica oleracea HOM05D007179 ORTHO05D009124 2.6e-29 132.5 110 66.4
Sp7g25970 Schrenkiella parvula HOM05D007179 ORTHO05D009124 4.4e-29 131.7 108 66.7
GSVIVG01032307001 Vitis vinifera HOM05D007179 ORTHO05D009124 4.4e-29 131.7 150 51.3
BraA03t14832Z Brassica rapa HOM05D007179 ORTHO05D009124 5.8e-29 131.3 101 71.3
Potri.006G175600 Populus trichocarpa HOM05D007179 ORTHO05D009124 7.6e-29 131.0 144 54.2
TAR626G0641 Trochodendron aralioides HOM05D007179 ORTHO05D009124 7.6e-29 131.0 148 53.4
BolC7t46066H Brassica oleracea HOM05D007179 ORTHO05D009124 1.7e-28 129.8 102 69.6
A03p57660 Brassica napus HOM05D007179 ORTHO05D009124 2.2e-28 129.4 101 70.3
Atru.chr7.533 Acer truncatum HOM05D007179 ORTHO05D009124 2.9e-28 129.0 124 56.5
C07p55870 Brassica napus HOM05D007179 ORTHO05D009124 2.9e-28 129.0 101 69.3
BraA01t01881Z Brassica rapa HOM05D007179 ORTHO05D009124 6.4e-28 127.9 110 63.6
A01p19410 Brassica napus HOM05D007179 ORTHO05D009124 8.4e-28 127.5 110 62.7
FvH4_4g08570 Fragaria vesca HOM05D007179 ORTHO05D009124 8.4e-28 127.5 106 64.2
Sabra06G0134300 Salix brachista HOM05D007179 ORTHO05D009124 8.4e-28 127.5 142 50.7
AL7G24590 Arabidopsis lyrata HOM05D007179 ORTHO05D009124 1.1e-27 127.1 109 64.2
BcaNung01603 Brassica carinata HOM05D007179 ORTHO05D009124 1.1e-27 127.1 109 64.2
Manes.06G029800 Manihot esculenta HOM05D007179 ORTHO05D009124 1.1e-27 127.1 118 58.5
Prupe.1G095600 Prunus persica HOM05D007179 ORTHO05D009124 1.1e-27 127.1 145 49.0
AT4G28025 Arabidopsis thaliana HOM05D007179 ORTHO05D009124 1.4e-27 126.7 111 63.1
Lalb_Chr13g0300481 Lupinus albus HOM05D007179 ORTHO05D009124 1.9e-27 126.3 124 56.5
Carub.0007s1277 Capsella rubella HOM05D007179 ORTHO05D009124 2.4e-27 125.9 111 62.2
PGR102G1777 Punica granatum HOM05D007179 ORTHO05D009124 2.4e-27 125.9 101 66.3
BcaC06g32651 Brassica carinata HOM05D007179 ORTHO05D009124 5.4e-27 124.8 101 67.3
Thhalv10026434m.g Eutrema salsugineum HOM05D007179 ORTHO05D009124 5.4e-27 124.8 108 63.9
Nitab4.5_0002004g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 7.1e-27 124.4 74 86.5
Eucgr.C02437 Eucalyptus grandis HOM05D007179 ORTHO05D009124 1.2e-26 123.6 101 65.3
RcHm_v2.0_Chr4g0404651 Rosa chinensis HOM05D007179 ORTHO05D009124 1.2e-26 123.6 144 50.7
COL.COLO4_16058 Corchorus olitorius HOM05D007179 ORTHO05D009124 2.1e-26 122.9 126 54.0
MBI15_g26085_MAGBIO Magnolia biondii HOM05D007179 ORTHO05D009124 2.7e-26 122.5 91 69.2
Ciclev10009752m.g Citrus clementina HOM05D007179 ORTHO05D009124 3.5e-26 122.1 138 48.6
TWI63G0613 Tripterygium wilfordii HOM05D007179 ORTHO05D009124 6.0e-26 121.3 118 54.2
Aa31LG3G160 Aethionema arabicum HOM05D007179 ORTHO05D009124 7.8e-26 120.9 133 54.1
CsaV3_2G008330 Cucumis sativus L. HOM05D007179 ORTHO05D009124 1.0e-25 120.6 140 50.0
Duzib150G1658 Durio zibethinus HOM05D007179 ORTHO05D009124 1.0e-25 120.6 95 63.2
Actinidia24032 Actinidia chinensis HOM05D007179 ORTHO05D009124 1.7e-25 119.8 95 64.2
DCAR_017946 Daucus carota HOM05D007179 ORTHO05D009124 2.3e-25 119.4 109 61.5
AUR62040282 Chenopodium quinoa HOM05D007179 ORTHO05D009124 3.0e-25 119.0 91 65.9
MELO3C004033.2 Cucumis melo HOM05D007179 ORTHO05D009124 3.0e-25 119.0 145 48.3
ClCG11G012230 Citrullus lanatus HOM05D007179 ORTHO05D009124 6.6e-25 117.9 135 48.1
Lsat_1_v5_gn_8_65641 Lactuca sativa HOM05D007179 ORTHO05D009124 1.1e-24 117.1 129 55.0
ECA236G0374 Erigeron canadensis HOM05D007179 ORTHO05D009124 2.5e-24 115.9 101 59.4
Glyma.17G067900 Glycine max HOM05D007179 ORTHO05D009124 2.5e-24 115.9 131 47.3
THA.LOC104811817 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 2.5e-24 115.9 102 60.8
CARHR235720 Cardamine hirsuta HOM05D007179 ORTHO05D009124 4.3e-24 115.2 111 58.6
Sc14g0001110 Simmondsia chinensis HOM05D007179 ORTHO05D009124 4.3e-24 115.2 113 56.6
Lj9A729T43 Lonicera japonica HOM05D007179 ORTHO05D009124 7.3e-24 114.4 135 51.1
ATR0580G253 Amborella trichopoda HOM05D007179 ORTHO05D009124 1.6e-23 113.2 131 49.6
AUR62039974 Chenopodium quinoa HOM05D007179 ORTHO05D009124 1.6e-23 113.2 107 57.0
Lj4g0019685 Lotus japonicus HOM05D007179 ORTHO05D009124 1.6e-23 113.2 122 52.5
THA.LOC104817810 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 2.8e-23 112.5 97 60.8
vmacro13080 Vaccinium macrocarpon HOM05D007179 ORTHO05D009124 2.8e-23 112.5 86 70.9
FAN22G0121 Fragaria x ananassa HOM05D007179 ORTHO05D009124 3.6e-23 112.1 84 72.6
HanXRQChr05g0136491 Helianthus annuus HOM05D007179 ORTHO05D009124 3.6e-23 112.1 142 47.2
VMungo1215G3157 Vigna mungo HOM05D007179 ORTHO05D009124 1.4e-22 110.2 109 55.0
Phvul.003G150500 Phaseolus vulgaris HOM05D007179 ORTHO05D009124 2.4e-22 109.4 109 56.0
Hund26395 Selenicereus undatus HOM05D007179 ORTHO05D009124 4.0e-22 108.6 118 53.4
Aqoxy7G03201 Aquilegia oxysepala HOM05D007179 ORTHO05D009124 6.9e-22 107.8 151 45.0
unitig_37.g12688 Utricularia gibba HOM05D007179 ORTHO05D009124 4.4e-21 105.1 106 57.5
FAN17G2417 Fragaria x ananassa HOM05D007179 ORTHO05D009124 9.9e-21 104.0 71 76.1
EL10Ac8g18859 Beta vulgaris HOM05D007179 ORTHO05D009124 1.3e-20 103.6 85 62.4
PSO063G6628 Papaver somniferum HOM05D007179 ORTHO05D009124 2.9e-20 102.4 140 47.9
CDE02G2992 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 2.4e-19 99.4 112 50.9
Ca_21187_v3 Cicer arietinum L. HOM05D000001 ORTHO05D009942 4.2e-19 98.6 75 66.7
Actinidia24777 Actinidia chinensis HOM05D007179 ORTHO05D009124 5.4e-19 98.2 70 70.0
CDE05G2983 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 5.4e-19 98.2 106 53.8
PSO782G3484 Papaver somniferum HOM05D007179 ORTHO05D009124 5.4e-19 98.2 145 46.2
SGA_v2.0_scaffold325G48698 Striga asiatica HOM05D007179 ORTHO05D009124 2.3e-17 92.8 104 53.8
HPP92_018535 Vanilla planifolia HOM05D007179 ORTHO05D009124 2.3e-17 92.8 93 54.8
Medtr4g129300 Medicago truncatula HOM05D007179 ORTHO05D009124 1.9e-16 89.7 91 54.9
SMO358G0032 Selaginella moellendorffii HOM05D007179 ORTHO05D009124 2.1e-15 86.3 92 51.1
Mapoly0124s0027 Marchantia polymorpha HOM05D007179 ORTHO05D009124 2.8e-15 85.9 98 45.9
AagrBONN_evm.TU.Sc2ySwM_362.2423 Anthoceros agrestis HOM05D007179 ORTHO05D009124 5.3e-14 81.6 97 44.3
Zm00001eb246810 Zea mays HOM05D007179 ORTHO05D009124 1.2e-13 80.5 72 59.7
Pp3c12_25950 Physcomitrium patens HOM05D007179 ORTHO05D009124 7.6e-13 77.8 77 46.8
Haze_22156 Corylus avellana HOM05D007179 ORTHO05D009124 1.3e-12 77.0 96 46.9
BcaC09g50519 Brassica carinata HOM05D000147 ORTHO05D013131 1.1e-11 73.9 58 65.5
Dinv42771 Davidia involucrata HOM05D007179 ORTHO05D009124 3.5e-10 68.9 101 47.5
Haze_22155 Corylus avellana HOM05D007179 ORTHO05D009124 3.9e-09 65.5 42 73.8


User provided reference genes

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