Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g002140 Solanum pennellii HOM05D006256 ORTHO05D007833 4.4e-75 284.6 156 100.0
Solyc07g006000.3 Solanum lycopersicum HOM05D006256 ORTHO05D007833 5.8e-75 284.3 156 99.4
PGSC0003DMG400011211 Solanum tuberosum HOM05D006256 ORTHO05D007833 1.2e-72 276.6 152 99.3
Peaxi162Scf00563g00414 Petunia axillaris HOM05D006256 ORTHO05D007833 7.8e-64 247.3 156 85.9
Nitab4.5_0006744g0050 Nicotiana tabacum HOM05D006256 ORTHO05D007833 1.1e-62 243.4 156 85.3
Nitab4.5_0001036g0150 Nicotiana tabacum HOM05D006256 ORTHO05D007833 1.9e-62 242.7 156 85.3
CAN.G1190.22 Capsicum annuum HOM05D006256 ORTHO05D007833 3.0e-39 165.6 129 77.5
Cc06_g14490 Coffea canephora HOM05D006256 ORTHO05D007833 2.2e-37 159.5 122 71.3
Oeu010284.1 Olea europaea HOM05D006256 ORTHO05D007833 3.7e-37 158.7 127 70.1
HanXRQChr12g0357751 Helianthus annuus HOM05D006256 ORTHO05D007833 1.1e-36 157.1 155 60.6
Hma1.2p1_1084F.1_g255300 Hydrangea macrophylla HOM05D006256 ORTHO05D007833 1.1e-36 157.1 149 62.4
Actinidia38660 Actinidia chinensis HOM05D006256 ORTHO05D007833 1.8e-36 156.4 156 61.5
vmacro06052 Vaccinium macrocarpon HOM05D006256 ORTHO05D007833 4.1e-36 155.2 151 58.9
MSTRG.10713 Avicennia marina HOM05D006256 ORTHO05D007833 1.5e-35 153.3 152 61.8
Migut.K00301 Erythranthe guttata HOM05D006256 ORTHO05D007833 1.3e-34 150.2 150 58.7
SalBow1G2070 Salvia bowleyana HOM05D006256 ORTHO05D007833 3.8e-34 148.7 153 58.2
Dinv43283 Davidia involucrata HOM05D006256 ORTHO05D007833 5.0e-34 148.3 149 59.1
Migut.J01392 Erythranthe guttata HOM05D006256 ORTHO05D007833 3.2e-33 145.6 156 60.9
ECA234G3762 Erigeron canadensis HOM05D006256 ORTHO05D007833 4.2e-33 145.2 154 57.8
SGA_v2.0_scaffold222G42778 Striga asiatica HOM05D006256 ORTHO05D007833 5.5e-33 144.8 150 61.3
Lsat_1_v5_gn_5_88481 Lactuca sativa HOM05D006256 ORTHO05D007833 3.6e-32 142.1 154 58.4
HanXRQChr10g0307761 Helianthus annuus HOM05D006256 ORTHO05D007833 2.3e-31 139.4 153 57.5
MBI15_g35737_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 3.0e-31 139.0 147 57.8
unitig_748.g7194 Utricularia gibba HOM05D006256 ORTHO05D007833 1.1e-30 137.1 115 68.7
CSS0035436 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 2.5e-30 136.0 154 61.7
AUR62025373 Chenopodium quinoa HOM05D006256 ORTHO05D007833 4.3e-30 135.2 155 55.5
Glyma.02G206700 Glycine max HOM05D006256 ORTHO05D007833 1.3e-29 133.7 121 64.5
VMungo1215G1943 Vigna mungo HOM05D006256 ORTHO05D007833 1.3e-29 133.7 122 63.9
Phvul.003G153700 Phaseolus vulgaris HOM05D006256 ORTHO05D007833 2.2e-29 132.9 122 63.1
Aqoxy7G03320 Aquilegia oxysepala HOM05D006256 ORTHO05D007833 2.8e-29 132.5 157 56.1
Carub.0004s0326 Capsella rubella HOM05D006256 ORTHO05D007833 3.7e-29 132.1 148 55.4
A04p18400 Brassica napus HOM05D006256 ORTHO05D007833 4.8e-29 131.7 145 54.5
BraA04t17452Z Brassica rapa HOM05D006256 ORTHO05D007833 4.8e-29 131.7 145 54.5
Lj4g0007171 Lotus japonicus HOM05D006256 ORTHO05D007833 1.1e-28 130.6 150 57.3
C04p53670 Brassica napus HOM05D006256 ORTHO05D007833 1.4e-28 130.2 145 54.5
BolC4t26923H Brassica oleracea HOM05D006256 ORTHO05D007833 1.4e-28 130.2 145 54.5
Nn2g12458 Nelumbo nucifera HOM05D006256 ORTHO05D007833 1.4e-28 130.2 143 59.4
AL4G14180 Arabidopsis lyrata HOM05D006256 ORTHO05D007833 1.8e-28 129.8 121 58.7
TAR383G0166 Trochodendron aralioides HOM05D006256 ORTHO05D007833 1.8e-28 129.8 127 60.6
A09p56610 Brassica napus HOM05D006256 ORTHO05D007833 5.3e-28 128.3 145 55.2
BraA09t41052Z Brassica rapa HOM05D006256 ORTHO05D007833 5.3e-28 128.3 145 55.2
Thhalv10000362m.g Eutrema salsugineum HOM05D006256 ORTHO05D007833 5.3e-28 128.3 146 56.2
Glyma.17G071200 Glycine max HOM05D006256 ORTHO05D007833 6.9e-28 127.9 131 58.8
Sed0025015 Sechium edule HOM05D006256 ORTHO05D007833 6.9e-28 127.9 151 57.6
EL10Ac8g18906 Beta vulgaris HOM05D006256 ORTHO05D007833 9.1e-28 127.5 160 53.8
TAR626G0939 Trochodendron aralioides HOM05D006256 ORTHO05D007833 9.1e-28 127.5 146 57.5
AUR62028378 Chenopodium quinoa HOM05D006256 ORTHO05D007833 1.2e-27 127.1 152 54.6
COL.COLO4_05401 Corchorus olitorius HOM05D006256 ORTHO05D007833 1.2e-27 127.1 152 56.6
Aa31LG7G12680 Aethionema arabicum HOM05D006256 ORTHO05D007833 2.0e-27 126.3 148 54.1
Ciclev10009792m.g Citrus clementina HOM05D006256 ORTHO05D007833 2.0e-27 126.3 133 58.6
Sp4g02990 Schrenkiella parvula HOM05D006256 ORTHO05D007833 2.0e-27 126.3 146 55.5
BcaC07g40961 Brassica carinata HOM05D006256 ORTHO05D007833 2.6e-27 125.9 145 54.5
CARHR118260 Cardamine hirsuta HOM05D006256 ORTHO05D007833 2.6e-27 125.9 149 53.0
CsaV3_1G029200 Cucumis sativus L. HOM05D006256 ORTHO05D007833 2.6e-27 125.9 151 58.3
Medtr4g130300 Medicago truncatula HOM05D006256 ORTHO05D007833 2.6e-27 125.9 151 54.3
RcHm_v2.0_Chr4g0405501 Rosa chinensis HOM05D006256 ORTHO05D007833 2.6e-27 125.9 153 54.2
AT2G24090 Arabidopsis thaliana HOM05D006256 ORTHO05D007833 3.4e-27 125.6 149 53.7
PGR102G0560 Punica granatum HOM05D006256 ORTHO05D007833 3.4e-27 125.6 154 55.8
MELO3C010199.2 Cucumis melo HOM05D006256 ORTHO05D007833 4.5e-27 125.2 151 57.6
FAN07G0991 Fragaria x ananassa HOM05D006256 ORTHO05D007833 4.5e-27 125.2 150 54.7
Prupe.1G102100 Prunus persica HOM05D006256 ORTHO05D007833 4.5e-27 125.2 124 60.5
C08p39560 Brassica napus HOM05D006256 ORTHO05D007833 7.7e-27 124.4 146 56.2
BolC8t51529H Brassica oleracea HOM05D006256 ORTHO05D007833 7.7e-27 124.4 146 56.2
CDE05G2121 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 7.7e-27 124.4 149 55.7
SEGI_40166 Sequoiadendron giganteum HOM05D006256 ORTHO05D007833 7.7e-27 124.4 111 64.9
Thecc.09G154100 Theobroma cacao HOM05D006256 ORTHO05D007833 1.0e-26 124.0 152 56.6
CDE02G1547 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 1.3e-26 123.6 145 56.6
ClCG06G012650 Citrullus lanatus HOM05D006256 ORTHO05D007833 1.3e-26 123.6 151 56.3
FAN22G0392 Fragaria x ananassa HOM05D006256 ORTHO05D007833 1.3e-26 123.6 152 54.6
Gohir.D08G098900 Gossypium hirsutum HOM05D006256 ORTHO05D007833 1.7e-26 123.2 124 62.1
Gorai.004G106500 Gossypium raimondii HOM05D006256 ORTHO05D007833 2.9e-26 122.5 124 62.1
PSO063G2398 Papaver somniferum HOM05D006256 ORTHO05D007833 2.9e-26 122.5 122 61.5
CANSAT11G0095 Cannabis sativa HOM05D006256 ORTHO05D007833 3.8e-26 122.1 148 55.4
FAN17G2907 Fragaria x ananassa HOM05D006256 ORTHO05D007833 3.8e-26 122.1 153 54.2
FAN17G2911 Fragaria x ananassa HOM05D006256 ORTHO05D007833 3.8e-26 122.1 153 54.2
Manes.14G113600 Manihot esculenta HOM05D006256 ORTHO05D007833 5.0e-26 121.7 152 56.6
HPP92_010352 Vanilla planifolia HOM05D006256 ORTHO05D007833 5.0e-26 121.7 149 55.0
Eucgr.C02515 Eucalyptus grandis HOM05D006256 ORTHO05D007833 6.5e-26 121.3 146 56.2
Duzib187G1001 Durio zibethinus HOM05D006256 ORTHO05D007833 8.5e-26 120.9 153 55.6
Psat7g006560 Pisum sativum HOM05D006256 ORTHO05D007833 8.5e-26 120.9 147 54.4
PSO170G3639 Papaver somniferum HOM05D006256 ORTHO05D007833 1.1e-25 120.6 149 55.0
Cfa020783 Carpinus fangiana HOM05D006256 ORTHO05D007833 1.4e-25 120.2 132 56.8
Haze_19139 Corylus avellana HOM05D006256 ORTHO05D007833 1.4e-25 120.2 132 56.8
Eucgr.L01548 Eucalyptus grandis HOM05D006256 ORTHO05D007833 1.4e-25 120.2 141 56.7
Cpa.g.sc199.16 Carica papaya HOM05D006256 ORTHO05D007833 1.9e-25 119.8 144 56.9
Gohir.A08G087800 Gossypium hirsutum HOM05D006256 ORTHO05D007833 1.9e-25 119.8 110 65.5
THA.LOC104803911 Tarenaya hassleriana HOM05D006256 ORTHO05D007833 1.9e-25 119.8 118 61.0
CiPaw.15G164300 Carya illinoinensis HOM05D006256 ORTHO05D007833 2.5e-25 119.4 133 56.4
CiPaw.16G106600 Carya illinoinensis HOM05D006256 ORTHO05D007833 3.2e-25 119.0 121 60.3
Atru.chr7.353 Acer truncatum HOM05D006256 ORTHO05D007833 4.2e-25 118.6 152 55.9
FvH4_4g09690 Fragaria vesca HOM05D006256 ORTHO05D007833 4.2e-25 118.6 151 53.0
Sabra18G0088200 Salix brachista HOM05D006256 ORTHO05D007833 5.5e-25 118.2 121 59.5
TWI32G1056 Tripterygium wilfordii HOM05D006256 ORTHO05D007833 7.2e-25 117.9 148 53.4
CSS0023303 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 9.4e-25 117.5 77 81.8
Os06g0647100 Oryza sativa ssp. japonica HOM05D006256 ORTHO05D007833 9.4e-25 117.5 80 75.0
Actinidia33300 Actinidia chinensis HOM05D006256 ORTHO05D007833 1.6e-24 116.7 148 52.7
arahy.Tifrunner.gnm1.ann1.RJ4A7B Arachis hypogaea HOM05D006256 ORTHO05D007833 2.1e-24 116.3 145 54.5
Potri.018G102700 Populus trichocarpa HOM05D006256 ORTHO05D007833 2.1e-24 116.3 147 55.1
arahy.Tifrunner.gnm1.ann1.6DRS7R Arachis hypogaea HOM05D006256 ORTHO05D007833 2.7e-24 115.9 145 55.2
MD04G1052200 Malus domestica HOM05D006256 ORTHO05D007833 1.4e-23 113.6 114 62.3
Zm00001eb386680 Zea mays HOM05D006256 ORTHO05D007833 1.8e-23 113.2 102 63.7
Dinv42817 Davidia involucrata HOM05D006256 ORTHO05D007833 4.4e-22 108.6 126 54.8
Hund08959 Selenicereus undatus HOM05D006256 ORTHO05D007833 5.7e-22 108.2 155 47.7
Lalb_Chr13g0300681 Lupinus albus HOM05D006256 ORTHO05D007833 2.2e-21 106.3 148 52.0
MBI15_g42789_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 3.7e-21 105.5 127 52.8
Gohir.A04G058552 Gossypium hirsutum HOM05D006256 ORTHO05D007833 2.4e-20 102.8 90 63.3
Mapoly0027s0042 Marchantia polymorpha HOM05D006256 ORTHO05D007833 2.4e-20 102.8 70 77.1
Rhsim03G0259400 Rhododendron simsii HOM05D006256 ORTHO05D007833 4.1e-20 102.1 87 64.4
GSVIVG01012561001 Vitis vinifera HOM05D006256 ORTHO05D007833 1.2e-19 100.5 66 80.3
GSVIVG01012574001 Vitis vinifera HOM05D006256 ORTHO05D007833 1.2e-19 100.5 66 80.3
Ah.09g228670 Amaranthus hybridus HOM05D006256 ORTHO05D007833 5.9e-19 98.2 224 38.4
BcaC02g08498 Brassica carinata HOM05D006256 ORTHO05D007833 1.3e-18 97.1 145 45.5
SMO164G0197 Selaginella moellendorffii HOM05D006256 ORTHO05D007833 5.5e-17 91.7 67 70.1
CBR_g46223 Chara braunii HOM05D006256 ORTHO05D007833 7.2e-17 91.3 85 60.0
Pp3c22_13420 Physcomitrium patens HOM05D006256 ORTHO05D007833 2.7e-16 89.4 121 47.9
ATR0580G126 Amborella trichopoda HOM05D006256 ORTHO05D007833 2.3e-15 86.3 92 57.6
TPR.G24835 Trifolium pratense HOM05D006256 ORTHO05D007833 1.1e-14 84.0 131 47.3
QL02p094215 Quercus lobata HOM05D006256 ORTHO05D007833 9.7e-14 80.9 110 50.0
Pp3c21_8680 Physcomitrium patens HOM05D006256 ORTHO05D007833 1.4e-12 77.0 61 67.2
SGA_v2.0_scaffold12G06024 Striga asiatica HOM05D006256 ORTHO05D007833 3.1e-12 75.9 72 58.3
CSS0026373 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 1.1e-09 67.4 111 46.8
Pp3c21_8670 Physcomitrium patens HOM05D004684 ORTHO05D006904 2.5e-09 66.2 87 54.0
MCO09G536 Micromonas commoda HOM05D006256 ORTHO05D007833 1.0e-07 60.8 83 47.0
Zm00001eb000270 Zea mays HOM05D006256 ORTHO05D007833 3.3e-06 55.8 47 72.3
PRCOL_00001020 Prasinoderma coloniale HOM05D006256 ORTHO05D007833 5.7e-06 55.1 61 45.9


User provided reference genes

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