Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g001720 Solanum pennellii HOM05D005968 ORTHO05D007158 6.8e-98 360.5 168 100.0
PGSC0003DMG400011184 Solanum tuberosum HOM05D005968 ORTHO05D007158 1.2e-94 349.7 165 98.2
CAN.G160.61 Capsicum annuum HOM05D005968 ORTHO05D007158 1.0e-93 346.7 168 95.2
Nitab4.5_0009876g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 2.1e-91 339.0 165 93.9
Peaxi162Scf00401g00718 Petunia axillaris HOM05D005968 ORTHO05D007158 2.6e-89 332.0 165 92.1
Nitab4.5_0003623g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 4.9e-88 327.8 161 93.8
SalBow1G6433 Salvia bowleyana HOM05D005968 ORTHO05D007158 4.9e-88 327.8 168 88.1
Lj7A459G65 Lonicera japonica HOM05D005968 ORTHO05D007158 8.4e-88 327.0 165 90.3
Migut.K00326 Erythranthe guttata HOM05D005968 ORTHO05D007158 1.9e-87 325.9 163 89.6
Oeu038140.1 Olea europaea HOM05D005968 ORTHO05D007158 3.2e-87 325.1 160 91.2
EL10Ac8g18668 Beta vulgaris HOM05D005968 ORTHO05D007158 1.2e-86 323.2 168 88.7
CiPaw.16G111000 Carya illinoinensis HOM05D005968 ORTHO05D007158 1.6e-86 322.8 168 87.5
Cc06_g14950 Coffea canephora HOM05D005968 ORTHO05D007158 1.6e-86 322.8 165 89.7
AUR62006466 Chenopodium quinoa HOM05D005968 ORTHO05D007158 2.1e-86 322.4 168 88.1
CiPaw.15G168400 Carya illinoinensis HOM05D005968 ORTHO05D007158 2.7e-86 322.0 168 86.9
Lsat_1_v5_gn_8_63401 Lactuca sativa HOM05D005968 ORTHO05D007158 2.7e-86 322.0 163 89.0
Aqoxy2G01962_Aqoxy2G01963 Aquilegia oxysepala HOM05D005968 ORTHO05D007158 3.5e-86 321.6 164 89.0
AUR62029822 Chenopodium quinoa HOM05D005968 ORTHO05D007158 3.5e-86 321.6 168 88.1
Glyma.17G073700 Glycine max HOM05D005968 ORTHO05D007158 3.5e-86 321.6 168 86.3
Gohir.D08G273400 Gossypium hirsutum HOM05D005968 ORTHO05D007158 3.5e-86 321.6 167 86.8
Gorai.004G291800 Gossypium raimondii HOM05D005968 ORTHO05D007158 3.5e-86 321.6 167 86.8
Nn8g39893 Nelumbo nucifera HOM05D005968 ORTHO05D007158 3.5e-86 321.6 161 88.8
Cfa020826 Carpinus fangiana HOM05D002374 ORTHO05D003594 4.6e-86 321.2 168 86.3
QL02p093270 Quercus lobata HOM05D005968 ORTHO05D007158 4.6e-86 321.2 160 90.0
Thecc.09G030600 Theobroma cacao HOM05D005968 ORTHO05D007158 4.6e-86 321.2 160 90.6
MSTRG.26272 Avicennia marina HOM05D005968 ORTHO05D007158 6.0e-86 320.9 161 90.1
Potri.006G184300 Populus trichocarpa HOM05D005968 ORTHO05D007158 7.9e-86 320.5 166 89.2
RcHm_v2.0_Chr2g0085611 Rosa chinensis HOM05D005968 ORTHO05D007158 7.9e-86 320.5 168 85.1
Glyma.02G204100 Glycine max HOM05D005968 ORTHO05D007158 1.0e-85 320.1 168 85.7
CSS0021374 Camellia sinensis var. sinensis HOM05D005968 ORTHO05D007158 1.3e-85 319.7 160 90.0
ECA236G4418 Erigeron canadensis HOM05D005968 ORTHO05D007158 1.3e-85 319.7 168 86.3
Atru.chr7.47_Atru.chr7.48 Acer truncatum HOM05D005968 ORTHO05D007158 1.7e-85 319.3 160 90.0
Lj4g0027447 Lotus japonicus HOM05D005968 ORTHO05D007158 1.7e-85 319.3 168 85.1
Lalb_Chr12g0198711 Lupinus albus HOM05D005968 ORTHO05D007158 1.7e-85 319.3 168 85.1
Ca_21128_v3 Cicer arietinum L. HOM05D005968 ORTHO05D007158 2.3e-85 318.9 168 86.3
Dinv41378 Davidia involucrata HOM05D005968 ORTHO05D007158 2.3e-85 318.9 160 90.0
Duzib187G1838 Durio zibethinus HOM05D005968 ORTHO05D007158 2.3e-85 318.9 160 89.4
arahy.Tifrunner.gnm1.ann1.D6JQQQ Arachis hypogaea HOM05D005968 ORTHO05D007158 3.9e-85 318.2 168 85.1
Hma1.2p1_0222F.1_g093590 Hydrangea macrophylla HOM05D005968 ORTHO05D007158 3.9e-85 318.2 168 85.7
Manes.14G143600 Manihot esculenta HOM05D005968 ORTHO05D007158 3.9e-85 318.2 166 86.7
TAR626G1902 Trochodendron aralioides HOM05D005968 ORTHO05D007158 3.9e-85 318.2 168 86.3
DCAR_019393 Daucus carota HOM05D005968 ORTHO05D007158 5.1e-85 317.8 165 87.9
VMungo1215G2113 Vigna mungo HOM05D005968 ORTHO05D007158 5.1e-85 317.8 168 85.1
HanXRQChr09g0245781 Helianthus annuus HOM05D005968 ORTHO05D007158 6.6e-85 317.4 168 87.5
SGA_v2.0_scaffold347G49545 Striga asiatica HOM05D005968 ORTHO05D007158 6.6e-85 317.4 165 86.1
TPR.G24830 Trifolium pratense HOM05D005968 ORTHO05D007158 6.6e-85 317.4 168 85.1
COL.COLO4_18810 Corchorus olitorius HOM05D000238 ORTHO05D007158 8.7e-85 317.0 157 90.4
unitig_52.g17565 Utricularia gibba HOM05D005968 ORTHO05D007158 1.1e-84 316.6 161 88.8
Cpa.g.sc46.157 Carica papaya HOM05D005968 ORTHO05D007158 2.5e-84 315.5 160 88.8
Dinv42854 Davidia involucrata HOM05D005968 ORTHO05D007158 2.5e-84 315.5 167 85.6
Eucgr.C02493 Eucalyptus grandis HOM05D005968 ORTHO05D007158 4.3e-84 314.7 168 84.5
Eucgr.C02540 Eucalyptus grandis HOM05D005968 ORTHO05D007158 4.3e-84 314.7 168 84.5
Prupe.7G263000 Prunus persica HOM05D005968 ORTHO05D007158 4.3e-84 314.7 166 84.9
CANSAT11G2689 Cannabis sativa HOM05D005968 ORTHO05D007158 5.6e-84 314.3 168 84.5
MD15G1144700 Malus domestica HOM05D005968 ORTHO05D007158 5.6e-84 314.3 160 88.1
Phvul.003G156000 Phaseolus vulgaris HOM05D005968 ORTHO05D007158 5.6e-84 314.3 168 84.5
GSVIVG01023606001 Vitis vinifera HOM05D005968 ORTHO05D007158 5.6e-84 314.3 168 83.9
Actinidia38673 Actinidia chinensis HOM05D005968 ORTHO05D007158 7.3e-84 313.9 160 89.4
TWI34G0179 Tripterygium wilfordii HOM05D005968 ORTHO05D007158 7.3e-84 313.9 166 85.5
FvH4_1g00920 Fragaria vesca HOM05D005968 ORTHO05D007158 9.6e-84 313.5 168 84.5
FAN28G0447 Fragaria x ananassa HOM05D005968 ORTHO05D007158 9.6e-84 313.5 168 84.5
Gohir.A08G251800 Gossypium hirsutum HOM05D005968 ORTHO05D007158 9.6e-84 313.5 160 88.8
MD02G1007400 Malus domestica HOM05D005968 ORTHO05D007158 9.6e-84 313.5 167 86.2
FAN26G1763 Fragaria x ananassa HOM05D005968 ORTHO05D007158 1.3e-83 313.2 168 84.5
Sc17g0006690 Simmondsia chinensis HOM05D005968 ORTHO05D007158 1.6e-83 312.8 160 88.1
FAN23G3092 Fragaria x ananassa HOM05D005968 ORTHO05D007158 2.8e-83 312.0 168 83.9
Ciclev10008980m.g Citrus clementina HOM05D005968 ORTHO05D007158 3.6e-83 311.6 160 87.5
Sabra18G0090900 Salix brachista HOM05D005968 ORTHO05D007158 4.8e-83 311.2 166 86.1
Nn2g12378 Nelumbo nucifera HOM05D005968 ORTHO05D007158 6.2e-83 310.8 158 88.6
Medtr4g130830 Medicago truncatula HOM05D005968 ORTHO05D007158 5.3e-82 307.8 168 83.3
PSO111G0029 Papaver somniferum HOM05D005968 ORTHO05D007158 5.3e-82 307.8 163 85.3
PSO561G0082 Papaver somniferum HOM05D005968 ORTHO05D007158 5.3e-82 307.8 163 85.3
Psat0s2403g0360 Pisum sativum HOM05D005968 ORTHO05D007158 5.3e-82 307.8 159 87.4
Potri.018G106700 Populus trichocarpa HOM05D005968 ORTHO05D007158 5.3e-82 307.8 160 87.5
THA.LOC104803560 Tarenaya hassleriana HOM05D005968 ORTHO05D007158 2.6e-81 305.4 163 85.3
Zm00001eb086780 Zea mays HOM05D005968 ORTHO05D007158 2.6e-81 305.4 160 84.4
AT4G30900 Arabidopsis thaliana HOM05D005968 ORTHO05D007158 4.5e-81 304.7 163 82.8
BcaNung03430 Brassica carinata HOM05D005968 ORTHO05D007158 4.5e-81 304.7 163 81.6
AL7G21190 Arabidopsis lyrata HOM05D005968 ORTHO05D007158 5.8e-81 304.3 163 82.2
BcaC09g51877 Brassica carinata HOM05D005968 ORTHO05D007158 5.8e-81 304.3 163 82.8
A01p07280 Brassica napus HOM05D005968 ORTHO05D007158 5.8e-81 304.3 163 82.8
C01p08040 Brassica napus HOM05D005968 ORTHO05D007158 5.8e-81 304.3 163 82.8
BolC1t00793H Brassica oleracea HOM05D005968 ORTHO05D007158 5.8e-81 304.3 163 82.8
BraA01t00677Z Brassica rapa HOM05D005968 ORTHO05D007158 5.8e-81 304.3 163 82.8
Sp7g28770 Schrenkiella parvula HOM05D005968 ORTHO05D007158 5.8e-81 304.3 163 82.8
Sabra06G0140100 Salix brachista HOM05D005968 ORTHO05D007158 7.6e-81 303.9 182 79.7
CsaV3_1G028970 Cucumis sativus L. HOM05D005968 ORTHO05D007158 9.9e-81 303.5 164 83.5
ATR0739G020 Amborella trichopoda HOM05D005968 ORTHO05D007158 1.3e-80 303.1 162 84.6
Carub.0007s0964 Capsella rubella HOM05D005968 ORTHO05D007158 1.3e-80 303.1 163 82.8
DCAR_017911 Daucus carota HOM05D005968 ORTHO05D007158 1.7e-80 302.8 165 83.6
SEGI_19747 Sequoiadendron giganteum HOM05D005968 ORTHO05D007158 2.2e-80 302.4 160 86.2
Sed0018428 Sechium edule HOM05D005968 ORTHO05D007158 3.8e-80 301.6 164 82.9
Thhalv10025727m.g Eutrema salsugineum HOM05D005968 ORTHO05D007158 8.4e-80 300.4 162 82.7
Zm00001eb420110 Zea mays HOM05D005968 ORTHO05D007158 8.4e-80 300.4 160 83.1
Lsat_1_v5_gn_4_18721 Lactuca sativa HOM05D005968 ORTHO05D007158 1.4e-79 299.7 163 82.2
CARHR238800 Cardamine hirsuta HOM05D005968 ORTHO05D007158 3.2e-79 298.5 163 81.6
vmacro06082 Vaccinium macrocarpon HOM05D005968 ORTHO05D007158 1.1e-74 283.5 184 73.9
Haze_19205 Corylus avellana HOM05D005968 ORTHO05D007158 3.2e-71 271.9 141 85.8
Lsat_1_v5_gn_7_66900 Lactuca sativa HOM05D005968 ORTHO05D007158 4.2e-63 245.0 163 70.6
PGR102G1528 Punica granatum HOM05D005968 ORTHO05D007158 8.7e-61 237.3 120 88.3
Mapoly0088s0077 Marchantia polymorpha HOM05D005968 ORTHO05D007158 6.9e-58 227.6 161 64.0
RhsimUnG0158300 Rhododendron simsii HOM05D005968 ORTHO05D001263 8.5e-56 220.7 122 79.5
TAR636G1721 Trochodendron aralioides HOM05D005968 ORTHO05D007158 1.8e-53 213.0 107 86.9
HPP92_004697 Vanilla planifolia HOM05D005968 ORTHO05D007158 1.0e-48 197.2 105 81.9
AagrBONN_evm.TU.Sc2ySwM_362.192 Anthoceros agrestis HOM05D005968 ORTHO05D007158 2.6e-36 156.0 119 58.0
arahy.Tifrunner.gnm1.ann1.HW7BNQ Arachis hypogaea HOM05D005968 ORTHO05D007158 6.5e-32 141.4 69 92.8
Nitab4.5_0006121g0010 Nicotiana tabacum HOM05D005968 ORTHO05D007158 9.8e-28 127.5 66 89.4
arahy.Tifrunner.gnm1.ann1.4WLG0J Arachis hypogaea HOM05D005968 ORTHO05D007158 6.1e-22 108.2 60 73.3
CiPaw.15G168700 Carya illinoinensis HOM05D005968 ORTHO05D007158 6.3e-19 98.2 50 90.0
SHI23672 Sapria himalayana HOM05D005968 ORTHO05D007158 1.6e-17 93.6 52 78.8


User provided reference genes

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