Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g001100 Solanum pennellii HOM05D005191 ORTHO05D006725 0.0e+00 1461.8 728 100.0
Solyc07g007810.3 Solanum lycopersicum HOM05D005191 ORTHO05D006725 0.0e+00 1394.4 728 96.3
CAN.G1663.1 Capsicum annuum HOM05D005191 ORTHO05D006725 0.0e+00 1355.9 729 92.5
Nitab4.5_0000374g0090 Nicotiana tabacum HOM05D005191 ORTHO05D006725 0.0e+00 1268.8 689 90.6
Peaxi162Scf00088g01225 Petunia axillaris HOM05D005191 ORTHO05D006725 0.0e+00 1248.0 726 86.5
Nitab4.5_0005159g0010 Nicotiana tabacum HOM05D005191 ORTHO05D006725 0.0e+00 1131.3 615 90.1
CSS0021683 Camellia sinensis var. sinensis HOM05D005191 ORTHO05D006725 0.0e+00 1115.5 737 73.9
MSTRG.26350 Avicennia marina HOM05D005191 ORTHO05D006725 0.0e+00 1095.5 730 72.7
Cc06_g08000 Coffea canephora HOM05D005191 ORTHO05D006725 0.0e+00 1083.6 719 73.7
Cc06_g08010 Coffea canephora HOM05D005191 ORTHO05D006725 0.0e+00 1083.6 719 73.7
QL02p090053 Quercus lobata HOM05D005191 ORTHO05D006725 0.0e+00 1077.0 727 71.3
CiPaw.03G249200 Carya illinoinensis HOM05D005191 ORTHO05D006725 5.0e-312 1074.3 730 71.0
Migut.K00420 Erythranthe guttata HOM05D005191 ORTHO05D006725 6.0e-311 1070.5 731 71.0
SGA_v2.0_scaffold63G21813 Striga asiatica HOM05D005191 ORTHO05D006725 1.6e-308 1062.4 731 70.7
Lj7A435G51 Lonicera japonica HOM05D005191 ORTHO05D006725 2.1e-308 1062.0 731 70.9
Cfa002299 Carpinus fangiana HOM05D005191 ORTHO05D006725 1.1e-306 1056.2 723 71.0
Gorai.004G107900 Gossypium raimondii HOM05D005191 ORTHO05D006725 2.5e-306 1055.0 723 70.5
Gohir.A08G088900 Gossypium hirsutum HOM05D005191 ORTHO05D006725 2.8e-305 1051.6 723 70.3
Thecc.09G133700 Theobroma cacao HOM05D005191 ORTHO05D006725 1.8e-304 1048.9 723 71.2
Rhsim03G0251800 Rhododendron simsii HOM05D005191 ORTHO05D006725 7.6e-303 1043.5 713 72.1
Ciclev10007583m.g Citrus clementina HOM05D005191 ORTHO05D006725 1.7e-302 1042.3 726 70.2
TAR625G1134 Trochodendron aralioides HOM05D005191 ORTHO05D006725 1.1e-298 1029.6 722 70.4
TWI63G0111 Tripterygium wilfordii HOM05D005191 ORTHO05D006725 5.6e-298 1027.3 728 68.4
Prupe.7G249300 Prunus persica HOM05D005191 ORTHO05D006725 9.6e-298 1026.5 721 69.2
MD15G1165500 Malus domestica HOM05D005191 ORTHO05D006725 8.1e-297 1023.5 732 68.4
CANSAT11G2540 Cannabis sativa HOM05D005191 ORTHO05D006725 3.1e-296 1021.5 721 67.4
MD02G1022800 Malus domestica HOM05D005191 ORTHO05D006725 3.1e-296 1021.5 727 68.5
Lsat_1_v5_gn_8_61061 Lactuca sativa HOM05D005191 ORTHO05D006725 6.9e-296 1020.4 699 70.0
RcHm_v2.0_Chr2g0087561 Rosa chinensis HOM05D005191 ORTHO05D006725 6.9e-296 1020.4 728 68.0
TWI32G0152 Tripterygium wilfordii HOM05D005191 ORTHO05D006725 6.9e-296 1020.4 711 68.4
ECA236G3625 Erigeron canadensis HOM05D005191 ORTHO05D006725 1.3e-294 1016.1 709 68.1
COL.COLO4_15579 Corchorus olitorius HOM05D005191 ORTHO05D006725 3.8e-294 1014.6 723 69.2
Potri.006G065000 Populus trichocarpa HOM05D005191 ORTHO05D006725 1.4e-293 1012.7 711 69.5
FAN23G0864 Fragaria x ananassa HOM05D005191 ORTHO05D006725 5.1e-291 1004.2 728 67.0
FAN26G1428 Fragaria x ananassa HOM05D005191 ORTHO05D006725 6.7e-291 1003.8 728 67.0
FvH4_1g02530 Fragaria vesca HOM05D005191 ORTHO05D006725 2.5e-290 1001.9 728 66.8
Sc18g0000280 Simmondsia chinensis HOM05D005191 ORTHO05D006725 2.5e-290 1001.9 716 68.2
FAN19G1407 Fragaria x ananassa HOM05D005191 ORTHO05D006725 4.3e-290 1001.1 728 66.8
Glyma.17G110600 Glycine max HOM05D005191 ORTHO05D006725 4.8e-289 997.7 719 67.3
Potri.T124807 Populus trichocarpa HOM05D005191 ORTHO05D006725 4.8e-289 997.7 711 69.2
Potri.018G125171 Populus trichocarpa HOM05D005191 ORTHO05D006725 1.1e-288 996.5 711 69.2
Nn2g12129 Nelumbo nucifera HOM05D005191 ORTHO05D006725 4.1e-288 994.6 718 68.1
FAN28G1162 Fragaria x ananassa HOM05D005191 ORTHO05D006725 5.3e-288 994.2 723 66.7
HanXRQChr05g0143851 Helianthus annuus HOM05D005191 ORTHO05D006725 6.9e-288 993.8 712 68.1
Lalb_Chr12g0198261 Lupinus albus HOM05D005191 ORTHO05D006725 3.4e-287 991.5 728 67.0
Gohir.D08G100100 Gossypium hirsutum HOM05D005191 ORTHO05D006725 5.0e-286 987.6 680 69.9
Eucgr.E03534 Eucalyptus grandis HOM05D005191 ORTHO05D006725 1.4e-285 986.1 722 67.3
Aqoxy7G02403 Aquilegia oxysepala HOM05D005191 ORTHO05D006725 7.2e-285 983.8 707 67.3
Sed0022210 Sechium edule HOM05D005191 ORTHO05D006725 9.3e-285 983.4 728 65.7
Cpa.g.sc46.51 Carica papaya HOM05D005191 ORTHO05D006725 2.7e-284 981.9 730 67.0
CsaV3_1G027890 Cucumis sativus L. HOM05D005191 ORTHO05D006725 5.1e-283 977.6 731 67.0
Phvul.003G169500 Phaseolus vulgaris HOM05D005191 ORTHO05D006725 3.3e-282 974.9 716 66.3
Glyma.13G160800 Glycine max HOM05D005191 ORTHO05D006725 4.3e-282 974.5 720 66.2
THA.LOC104826555 Tarenaya hassleriana HOM05D005191 ORTHO05D006725 7.4e-282 973.8 712 65.9
PSO170G6846 Papaver somniferum HOM05D005191 ORTHO05D006725 3.7e-281 971.5 721 65.2
PSO017G2350 Papaver somniferum HOM05D005191 ORTHO05D006725 6.3e-281 970.7 721 64.9
Sabra18G0106500 Salix brachista HOM05D005191 ORTHO05D006725 1.2e-279 966.5 735 65.3
VMungo1215G2132 Vigna mungo HOM05D005191 ORTHO05D006725 5.9e-279 964.1 716 65.6
AUR62013300 Chenopodium quinoa HOM05D005191 ORTHO05D006725 1.4e-277 959.5 717 65.7
Manes.06G046300 Manihot esculenta HOM05D005191 ORTHO05D006725 1.6e-276 956.1 728 65.2
arahy.Tifrunner.gnm1.ann1.0L2UMW Arachis hypogaea HOM05D005191 ORTHO05D006725 4.6e-276 954.5 730 64.7
arahy.Tifrunner.gnm1.ann1.W0WM15 Arachis hypogaea HOM05D005191 ORTHO05D006725 1.0e-275 953.4 730 64.5
Lj4g0015768 Lotus japonicus HOM05D005191 ORTHO05D006725 1.8e-275 952.6 731 65.1
Psat4g036440 Pisum sativum HOM05D005191 ORTHO05D006725 4.3e-274 948.0 721 64.5
Dinv41468 Davidia involucrata HOM05D005191 ORTHO05D006725 2.4e-272 942.2 603 76.3
ClCG06G011590 Citrullus lanatus HOM05D005191 ORTHO05D006725 9.1e-272 940.3 783 61.8
TPR.G7618 Trifolium pratense HOM05D005191 ORTHO05D006725 3.4e-271 938.3 688 67.2
Duzib150G0407 Durio zibethinus HOM05D005191 ORTHO05D006725 1.0e-270 936.8 729 64.7
EL10Ac8g18733 Beta vulgaris HOM05D005191 ORTHO05D006725 1.3e-265 919.8 844 56.9
Hund26552 Selenicereus undatus HOM05D005191 ORTHO05D006725 1.8e-259 899.4 730 62.5
Actinidia26371 Actinidia chinensis HOM05D005191 ORTHO05D006725 7.5e-258 894.0 717 63.2
DCAR_009327 Daucus carota HOM05D005191 ORTHO05D006725 3.7e-257 891.7 721 63.0
AUR62011184 Chenopodium quinoa HOM05D005191 ORTHO05D006725 5.9e-255 884.4 729 62.0
PGR142G3543 Punica granatum HOM05D005191 ORTHO05D006725 5.9e-255 884.4 711 63.2
A06p26710 Brassica napus HOM05D005191 ORTHO05D006725 5.9e-247 857.8 709 60.1
Sp3g26260 Schrenkiella parvula HOM05D005191 ORTHO05D006725 1.1e-245 853.6 731 58.7
Aa31LG8G12200 Aethionema arabicum HOM05D005191 ORTHO05D006725 5.5e-245 851.3 712 59.3
Carub.0003s2755 Capsella rubella HOM05D005191 ORTHO05D006725 5.5e-245 851.3 712 59.6
AL3G44790 Arabidopsis lyrata HOM05D005191 ORTHO05D006725 1.0e-243 847.0 731 59.0
BcaC01g02222 Brassica carinata HOM05D005191 ORTHO05D006725 5.2e-243 844.7 733 58.7
C03p67700 Brassica napus HOM05D005191 ORTHO05D006725 5.2e-243 844.7 733 58.7
BcaB02g10775 Brassica carinata HOM05D005191 ORTHO05D006725 1.5e-242 843.2 713 59.3
AT2G11000 Arabidopsis thaliana HOM05D005191 ORTHO05D006725 2.0e-242 842.8 716 59.5
BolSC21t60229H Brassica oleracea HOM05D005191 ORTHO05D006725 1.4e-240 836.6 737 57.8
Atru.chr7.1956 Acer truncatum HOM05D005191 ORTHO05D006725 9.2e-240 833.9 549 73.0
Medtr4g115450 Medicago truncatula HOM05D005191 ORTHO05D006725 4.4e-234 815.1 613 64.4
SalBow1G1849 Salvia bowleyana HOM05D005191 ORTHO05D006725 4.6e-231 805.1 623 63.2
ATR0800G098 Amborella trichopoda HOM05D005191 ORTHO05D006725 3.3e-229 798.9 662 61.0
BraA06t25606Z Brassica rapa HOM05D005191 ORTHO05D006725 4.3e-229 798.5 726 56.9
MELO3C010304.2 Cucumis melo HOM05D005191 ORTHO05D006725 8.9e-219 764.2 749 55.3
Oeu052176.1 Olea europaea HOM05D005191 ORTHO05D006725 2.3e-206 723.0 473 73.6
GSVIVG01015604001 Vitis vinifera HOM05D005191 ORTHO05D006725 2.7e-199 699.5 473 70.6
Thhalv10022576m.g Eutrema salsugineum HOM05D005191 ORTHO05D006725 3.0e-198 696.0 610 57.5
SEGI_14008 Sequoiadendron giganteum HOM05D005191 ORTHO05D006725 2.1e-196 689.9 722 51.4
vmacro06157 Vaccinium macrocarpon HOM05D005191 ORTHO05D006725 2.0e-194 683.3 456 73.2
Ah.14g079340 Amaranthus hybridus HOM05D005191 ORTHO05D006725 9.0e-179 631.3 479 62.8
HPP92_010843 Vanilla planifolia HOM05D005191 ORTHO05D006725 4.3e-173 612.5 467 64.2
Mapoly0005s0239 Marchantia polymorpha HOM05D005191 ORTHO05D006725 9.7e-173 611.3 743 46.3
CARHR104890 Cardamine hirsuta HOM05D005191 ORTHO05D006725 8.2e-172 608.2 468 64.1
Pp3c26_8550 Physcomitrium patens HOM05D005191 ORTHO05D006725 4.5e-170 602.4 736 44.4
Hund26401 Selenicereus undatus HOM05D005191 ORTHO05D006725 2.0e-157 560.5 481 59.0
Haze_25489 Corylus avellana HOM05D005191 ORTHO05D006725 5.3e-155 552.4 449 64.1
Ca_21665_v3 Cicer arietinum L. HOM05D005191 ORTHO05D006725 1.6e-151 540.8 392 67.6
Zm00001eb192130 Zea mays HOM05D005191 ORTHO05D006725 2.1e-151 540.4 421 63.4
AagrBONN_evm.TU.Sc2ySwM_344.2372 Anthoceros agrestis HOM05D005191 ORTHO05D006725 2.2e-148 530.4 690 42.6
unitig_0.g2715 Utricularia gibba HOM05D005191 ORTHO05D006725 3.5e-146 523.1 413 64.6
Os02g0803250 Oryza sativa ssp. japonica HOM05D005191 ORTHO05D006725 1.3e-132 478.0 690 41.3
Haze_25491 Corylus avellana HOM05D005191 ORTHO05D006725 2.0e-130 470.7 381 61.2
CBR_g29413 Chara braunii HOM05D005191 ORTHO05D006725 3.0e-126 456.8 748 37.7
SMO174G0034 Selaginella moellendorffii HOM05D005191 ORTHO05D006725 1.6e-122 444.5 739 38.4
CDE05G1862 Ceratophyllum demersum HOM05D005191 ORTHO05D006725 9.2e-115 418.7 370 59.5
Ca_06948_v3 Cicer arietinum L. HOM05D005191 ORTHO05D006725 8.0e-111 405.6 327 61.5
Actinidia38723 Actinidia chinensis HOM05D005191 ORTHO05D006725 1.7e-108 397.9 296 66.2
Sabra06G0047500 Salix brachista HOM05D005191 ORTHO05D006725 1.3e-105 388.3 308 61.4
GSVIVG01002648001 Vitis vinifera HOM05D005191 ORTHO05D006725 3.9e-81 307.0 184 80.4
vmacro06156 Vaccinium macrocarpon HOM05D005191 ORTHO05D006725 4.5e-77 293.5 245 60.4
Psat6g224720 Pisum sativum HOM05D005191 ORTHO05D006725 1.3e-68 265.4 205 61.5
Nitab4.5_0005159g0020 Nicotiana tabacum HOM05D005191 ORTHO05D006725 2.8e-55 221.1 114 92.1
FAN06G0842 Fragaria x ananassa HOM05D005191 ORTHO05D006725 1.7e-47 195.3 315 39.7
Rhsim13G0106800 Rhododendron simsii HOM05D005191 ORTHO05D006725 7.2e-43 179.9 142 67.6
unitig_0.g2716 Utricularia gibba HOM05D005191 ORTHO05D006725 3.6e-42 177.6 150 60.0
CDE05G1976 Ceratophyllum demersum HOM05D005191 ORTHO05D006725 8.2e-39 166.4 159 54.7
Actinidia38722 Actinidia chinensis HOM05D005191 ORTHO05D006725 4.5e-37 160.6 161 52.2
TPR.G8947 Trifolium pratense HOM05D005191 ORTHO05D006725 2.9e-36 157.9 98 74.5
PRCOL_00001705 Prasinoderma coloniale HOM05D005191 ORTHO05D006725 1.7e-31 142.1 539 26.5
RcHm_v2.0_Chr5g0051701 Rosa chinensis HOM05D005191 ORTHO05D006725 4.1e-30 137.5 140 50.0
FAN06G5005 Fragaria x ananassa HOM05D005191 ORTHO05D006725 7.0e-30 136.7 268 36.2
Cre06.g300650 Chlamydomonas reinhardtii HOM05D005191 ORTHO05D006725 3.2e-27 127.9 807 21.7
FAN10G4062 Fragaria x ananassa HOM05D005191 ORTHO05D006725 1.0e-25 122.9 123 56.1
FvH4_7g23890 Fragaria vesca HOM05D005191 ORTHO05D006725 2.3e-25 121.7 144 45.1
FAN10G2766 Fragaria x ananassa HOM05D005191 ORTHO05D006725 2.9e-20 104.8 84 59.5
FAN15G1193 Fragaria x ananassa HOM05D002169 ORTHO05D006927 1.9e-19 102.1 74 64.9
FAN26G2291 Fragaria x ananassa HOM05D005191 ORTHO05D006725 5.5e-19 100.5 86 57.0
MBI13_g29624_MAGBIO Magnolia biondii HOM05D005191 ORTHO05D006725 5.5e-19 100.5 63 71.4
Rhsim05G0138400 Rhododendron simsii HOM05D005191 ORTHO05D006725 6.8e-17 93.6 121 52.1
Rhsim10G0150400 Rhododendron simsii HOM05D005191 ORTHO05D030537 7.7e-13 80.1 51 78.4
FvH4_1g29180 Fragaria vesca HOM05D005191 ORTHO05D025363 1.1e-11 76.3 55 67.3
GSVIVG01012804001 Vitis vinifera HOM05D005191 ORTHO05D006725 1.9e-11 75.5 60 63.3
COL.COLO4_23752 Corchorus olitorius HOM05D005191 ORTHO05D016248 3.3e-11 74.7 59 66.1
COL.COLO4_21409 Corchorus olitorius HOM05D005191 ORTHO05D016248 2.8e-10 71.6 56 67.9
Sp3g26280 Schrenkiella parvula HOM05D005191 ORTHO05D012938 2.0e-08 65.5 66 51.5
Thhalv10022959m.g Eutrema salsugineum HOM05D005191 ORTHO05D006725 9.8e-08 63.2 97 37.1


User provided reference genes

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