Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g036000 Solanum pennellii HOM05D007601 ORTHO05D009605 8.8e-69 263.5 130 100.0
CAN.G1209.15 Capsicum annuum HOM05D007601 ORTHO05D009605 2.0e-49 199.1 121 81.8
CSS0043622 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 5.6e-47 191.0 130 73.1
CSS0036648 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 1.2e-46 189.9 130 72.3
MSTRG.18076 Avicennia marina HOM05D007601 ORTHO05D009605 3.6e-46 188.3 130 69.2
Dinv33148 Davidia involucrata HOM05D007601 ORTHO05D009605 3.6e-46 188.3 127 71.7
Migut.D00044 Erythranthe guttata HOM05D007601 ORTHO05D009605 8.0e-46 187.2 133 70.7
Hma1.2p1_0965F.1_g242190 Hydrangea macrophylla HOM05D007601 ORTHO05D009605 1.0e-45 186.8 125 70.4
CiPaw.07G121600 Carya illinoinensis HOM05D007601 ORTHO05D009605 1.8e-45 186.0 130 66.9
Potri.002G191200 Populus trichocarpa HOM05D007601 ORTHO05D009605 1.8e-45 186.0 123 72.4
COL.COLO4_23178 Corchorus olitorius HOM05D007601 ORTHO05D009605 2.3e-45 185.7 124 72.6
Manes.01G231900 Manihot esculenta HOM05D007601 ORTHO05D009605 2.3e-45 185.7 132 68.2
Duzib138G1106 Durio zibethinus HOM05D007601 ORTHO05D009605 3.1e-45 185.3 124 71.8
Gohir.A11G107400 Gossypium hirsutum HOM05D007601 ORTHO05D009605 4.0e-45 184.9 124 71.8
THA.LOC104815915 Tarenaya hassleriana HOM05D007601 ORTHO05D009605 6.8e-45 184.1 121 71.1
FvH4_1g26600 Fragaria vesca HOM05D007601 ORTHO05D009605 8.9e-45 183.7 130 70.0
TPR.G4122 Trifolium pratense HOM05D007601 ORTHO05D009605 1.2e-44 183.3 119 73.9
QL12p018497 Quercus lobata HOM05D007601 ORTHO05D009605 2.6e-44 182.2 128 66.4
Ca_09231_v3 Cicer arietinum L. HOM05D007601 ORTHO05D009605 4.4e-44 181.4 119 73.1
Oeu044742.1 Olea europaea HOM05D007601 ORTHO05D009605 5.8e-44 181.0 130 66.2
Eucgr.H00897 Eucalyptus grandis HOM05D007601 ORTHO05D009605 7.5e-44 180.6 129 67.4
Glyma.19G219400 Glycine max HOM05D007601 ORTHO05D009605 7.5e-44 180.6 117 72.6
arahy.Tifrunner.gnm1.ann1.FU6CGW Arachis hypogaea HOM05D007601 ORTHO05D009605 9.8e-44 180.3 122 68.9
FAN26G1400 Fragaria x ananassa HOM05D007601 ORTHO05D009605 9.8e-44 180.3 130 70.0
Glyma.03G222200 Glycine max HOM05D007601 ORTHO05D009605 1.3e-43 179.9 119 71.4
Medtr7g109980 Medicago truncatula HOM05D007601 ORTHO05D009605 1.3e-43 179.9 119 71.4
Sabra02G0164400 Salix brachista HOM05D007601 ORTHO05D009605 1.3e-43 179.9 127 69.3
arahy.Tifrunner.gnm1.ann1.UJ54IQ Arachis hypogaea HOM05D007601 ORTHO05D009605 1.7e-43 179.5 122 68.0
Aa31LG5G1450 Aethionema arabicum HOM05D007601 ORTHO05D009605 2.2e-43 179.1 120 68.3
Gohir.D11G112200 Gossypium hirsutum HOM05D007601 ORTHO05D009605 2.2e-43 179.1 124 70.2
Carub.0006s3532 Capsella rubella HOM05D007601 ORTHO05D009605 3.7e-43 178.3 130 64.6
Atru.chr5.923 Acer truncatum HOM05D007601 ORTHO05D009605 4.9e-43 177.9 120 70.0
BcaB01g02392 Brassica carinata HOM05D007601 ORTHO05D009605 4.9e-43 177.9 120 66.7
Prupe.3G005400 Prunus persica HOM05D007601 ORTHO05D009605 4.9e-43 177.9 122 68.9
Thecc.01G320300 Theobroma cacao HOM05D007601 ORTHO05D009605 6.4e-43 177.6 124 70.2
TAR633G2747 Trochodendron aralioides HOM05D007601 ORTHO05D009605 8.3e-43 177.2 120 69.2
Thhalv10029076m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 1.1e-42 176.8 122 66.4
Ciclev10022849m.g Citrus clementina HOM05D007601 ORTHO05D009605 1.9e-42 176.0 119 69.7
DCAR_002918 Daucus carota HOM05D007601 ORTHO05D009605 1.9e-42 176.0 130 66.2
VMungo1383G2396 Vigna mungo HOM05D007601 ORTHO05D009605 3.2e-42 175.3 117 71.8
A03p31410 Brassica napus HOM05D007601 ORTHO05D009605 4.1e-42 174.9 119 65.5
GSVIVG01028182001 Vitis vinifera HOM05D007601 ORTHO05D009605 4.1e-42 174.9 130 62.3
AL6G51380 Arabidopsis lyrata HOM05D007601 ORTHO05D009605 5.4e-42 174.5 120 65.0
Cpa.g.c29544.1 Carica papaya HOM05D007601 ORTHO05D009605 7.0e-42 174.1 123 67.5
BraA03t12322Z Brassica rapa HOM05D007601 ORTHO05D009605 1.2e-41 173.3 119 64.7
Sp6g01760 Schrenkiella parvula HOM05D007601 ORTHO05D009605 1.2e-41 173.3 119 64.7
BcaC01g06793 Brassica carinata HOM05D007601 ORTHO05D009605 1.6e-41 172.9 120 65.0
BcaC01g06795 Brassica carinata HOM05D007601 ORTHO05D009605 1.6e-41 172.9 120 65.0
BolC3t16113H Brassica oleracea HOM05D007601 ORTHO05D009605 1.6e-41 172.9 120 65.0
C03p38320 Brassica napus HOM05D007601 ORTHO05D009605 2.0e-41 172.6 119 64.7
CARHR249870 Cardamine hirsuta HOM05D007601 ORTHO05D009605 2.7e-41 172.2 120 63.3
CsaV3_3G031680 Cucumis sativus L. HOM05D007601 ORTHO05D009605 2.7e-41 172.2 128 60.9
Lj1g0003568 Lotus japonicus HOM05D007601 ORTHO05D009605 3.5e-41 171.8 115 69.6
TWI59G0276 Tripterygium wilfordii HOM05D007601 ORTHO05D009605 4.6e-41 171.4 117 71.8
MD17G1280000 Malus domestica HOM05D007601 ORTHO05D009605 1.3e-40 169.9 118 69.5
Sc14g0006440 Simmondsia chinensis HOM05D007601 ORTHO05D009605 1.3e-40 169.9 120 67.5
FAN19G1881 Fragaria x ananassa HOM05D007601 ORTHO05D009605 2.3e-40 169.1 157 58.0
PSO210G6513 Papaver somniferum HOM05D007601 ORTHO05D009605 3.9e-40 168.3 122 63.9
Psat3g018760 Pisum sativum HOM05D007601 ORTHO05D009605 3.9e-40 168.3 119 68.1
Lalb_Chr04g0260071 Lupinus albus HOM05D007601 ORTHO05D009605 5.0e-40 167.9 120 66.7
MD09G1287800 Malus domestica HOM05D007601 ORTHO05D009605 5.0e-40 167.9 118 68.6
Phvul.001G215600 Phaseolus vulgaris HOM05D007601 ORTHO05D009605 6.6e-40 167.5 117 68.4
Rhsim01G0292900 Rhododendron simsii HOM05D007601 ORTHO05D009605 6.6e-40 167.5 111 73.9
RcHm_v2.0_Chr3g0486741 Rosa chinensis HOM05D007601 ORTHO05D009605 1.1e-39 166.8 113 72.6
Sed0008912 Sechium edule HOM05D007601 ORTHO05D009605 1.1e-39 166.8 122 62.3
HanXRQChr01g0010181 Helianthus annuus HOM05D007601 ORTHO05D009605 1.5e-39 166.4 121 63.6
AT4G01897 Arabidopsis thaliana HOM05D007601 ORTHO05D009605 3.3e-39 165.2 120 61.7
ClCG10G011680 Citrullus lanatus HOM05D007601 ORTHO05D009605 3.3e-39 165.2 149 54.4
CANSAT25G0069 Cannabis sativa HOM05D007601 ORTHO05D009605 9.5e-39 163.7 125 63.2
ECA248G1243 Erigeron canadensis HOM05D007601 ORTHO05D009605 9.5e-39 163.7 121 62.8
Solyc06g084625.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 9.5e-39 163.7 80 100.0
PSO761G0263 Papaver somniferum HOM05D007601 ORTHO05D009605 1.1e-37 160.2 118 64.4
Cc01_g21960 Coffea canephora HOM05D007601 ORTHO05D009605 1.8e-37 159.5 126 64.3
Gorai.007G120500 Gossypium raimondii HOM05D007601 ORTHO05D009605 1.8e-37 159.5 104 73.1
FAN28G1650 Fragaria x ananassa HOM05D007601 ORTHO05D009605 2.6e-36 155.6 105 74.3
Aqoxy2G02617 Aquilegia oxysepala HOM05D007601 ORTHO05D009605 5.8e-36 154.5 120 65.0
AUR62011748 Chenopodium quinoa HOM05D007601 ORTHO05D009605 7.5e-36 154.1 128 58.6
MELO3C012921.2 Cucumis melo HOM05D007601 ORTHO05D009605 9.8e-36 153.7 106 67.0
Hund09590 Selenicereus undatus HOM05D007601 ORTHO05D009605 2.9e-35 152.1 123 58.5
EL10As5g23595 Beta vulgaris HOM05D007601 ORTHO05D009605 8.3e-35 150.6 126 56.3
Os03g0564200 Oryza sativa ssp. japonica HOM05D007601 ORTHO05D009605 1.1e-34 150.2 113 64.6
Zm00001eb043090 Zea mays HOM05D007601 ORTHO05D009605 3.5e-33 145.2 115 59.1
Nn4g25447 Nelumbo nucifera HOM05D007601 ORTHO05D009605 2.5e-31 139.0 130 55.4
SalBow6G1877 Salvia bowleyana HOM05D007601 ORTHO05D009605 1.1e-29 133.7 79 77.2
FAN23G1483 Fragaria x ananassa HOM05D007601 ORTHO05D009605 6.0e-25 117.9 80 72.5
AUR62024591 Chenopodium quinoa HOM05D007601 ORTHO05D009605 2.3e-24 115.9 128 48.4
Pp3c1_30400 Physcomitrium patens HOM05D007601 ORTHO05D009605 8.6e-24 114.0 117 47.0
AagrBONN_evm.TU.Sc2ySwM_228.1634 Anthoceros agrestis HOM05D007601 ORTHO05D009605 1.9e-23 112.8 112 50.0
MBI19_g32697_MAGBIO Magnolia biondii HOM05D007601 ORTHO05D009605 7.3e-23 110.9 87 63.2
CDE05G3673 Ceratophyllum demersum HOM05D007601 ORTHO05D009605 2.4e-21 105.9 86 67.4
Solyc04g150173.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 2.4e-21 105.9 51 100.0
vmacro15096 Vaccinium macrocarpon HOM05D007601 ORTHO05D009605 4.4e-20 101.7 59 81.4
Mapoly0105s0007 Marchantia polymorpha HOM05D007601 ORTHO05D009605 1.3e-16 90.1 103 47.6
Thhalv10009552m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 9.0e-13 77.4 85 49.4
SMO196G0166 Selaginella moellendorffii HOM05D007601 ORTHO05D009605 1.5e-12 76.6 104 41.3
CBR_g40435 Chara braunii HOM05D007601 ORTHO05D009605 2.7e-09 65.9 92 45.7


User provided reference genes

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