Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g035930 Solanum pennellii HOM05D007613 ORTHO05D009344 1.3e-69 266.2 129 100.0
Solyc06g084550.3 Solanum lycopersicum HOM05D007613 ORTHO05D009344 2.5e-68 261.9 129 97.7
Nitab4.5_0019054g0010 Nicotiana tabacum HOM05D007613 ORTHO05D009344 1.3e-64 249.6 129 93.0
Peaxi162Scf00140g01222 Petunia axillaris HOM05D007613 ORTHO05D009344 1.7e-64 249.2 129 92.2
Nitab4.5_0002820g0060 Nicotiana tabacum HOM05D007613 ORTHO05D009344 5.0e-64 247.7 129 91.5
CAN.G1209.25 Capsicum annuum HOM05D007613 ORTHO05D009344 5.1e-61 237.7 129 89.1
Oeu048336.2 Olea europaea HOM05D007613 ORTHO05D009344 2.4e-50 202.2 128 74.2
PGSC0003DMG400024046 Solanum tuberosum HOM05D007613 ORTHO05D009344 5.0e-48 194.5 152 69.7
Actinidia24821 Actinidia chinensis HOM05D007613 ORTHO05D009344 1.4e-45 186.4 128 67.2
vmacro15014 Vaccinium macrocarpon HOM05D007613 ORTHO05D009344 1.5e-44 183.0 133 63.9
ECA248G1192 Erigeron canadensis HOM05D007613 ORTHO05D009344 1.3e-43 179.9 127 66.1
MSTRG.18147 Avicennia marina HOM05D007613 ORTHO05D009344 2.2e-43 179.1 128 65.6
Cc01_g20860 Coffea canephora HOM05D007613 ORTHO05D009344 2.2e-43 179.1 127 64.6
Migut.D00222 Erythranthe guttata HOM05D007613 ORTHO05D009344 2.8e-43 178.7 125 67.2
Lsat_1_v5_gn_5_191040 Lactuca sativa HOM05D007613 ORTHO05D009344 4.1e-42 174.9 127 63.8
HanXRQChr13g0413041 Helianthus annuus HOM05D007613 ORTHO05D009344 7.7e-41 170.6 125 63.2
Ciclev10022836m.g Citrus clementina HOM05D007613 ORTHO05D009344 6.5e-40 167.5 128 60.9
Eucgr.H01109 Eucalyptus grandis HOM05D007613 ORTHO05D009344 6.5e-40 167.5 128 61.7
Potri.014G128900 Populus trichocarpa HOM05D007613 ORTHO05D009344 1.5e-39 166.4 128 60.2
QL12p028448 Quercus lobata HOM05D007613 ORTHO05D009344 1.9e-39 166.0 128 60.9
PGR119G2478 Punica granatum HOM05D007613 ORTHO05D009344 5.5e-39 164.5 125 61.6
CiPaw.07G109200 Carya illinoinensis HOM05D007613 ORTHO05D009344 1.2e-38 163.3 128 60.2
Hma1.2p1_0491F.1_g164570 Hydrangea macrophylla HOM05D007613 ORTHO05D009344 4.7e-38 161.4 129 61.2
TAR636G2501 Trochodendron aralioides HOM05D007613 ORTHO05D009344 6.1e-38 161.0 128 59.4
DCAR_018332 Daucus carota HOM05D007613 ORTHO05D009344 1.0e-37 160.2 125 59.2
arahy.Tifrunner.gnm1.ann1.BW40YJ Arachis hypogaea HOM05D007613 ORTHO05D009344 1.4e-37 159.8 128 57.8
Manes.01G219200 Manihot esculenta HOM05D007613 ORTHO05D009344 1.8e-37 159.5 128 58.6
TPR.G33996 Trifolium pratense HOM05D007613 ORTHO05D009344 6.8e-37 157.5 128 59.4
arahy.Tifrunner.gnm1.ann1.7MAL8N Arachis hypogaea HOM05D007613 ORTHO05D009344 1.2e-36 156.8 128 56.2
VMungo0720G1265 Vigna mungo HOM05D007613 ORTHO05D009344 3.4e-36 155.2 128 58.6
GSVIVG01028017001 Vitis vinifera HOM05D007613 ORTHO05D009344 5.7e-36 154.5 126 58.7
Psat6g165400 Pisum sativum HOM05D007613 ORTHO05D009344 1.7e-35 152.9 128 57.0
MELO3C016000.2 Cucumis melo HOM05D007613 ORTHO05D009344 3.7e-35 151.8 128 57.0
Phvul.007G146700 Phaseolus vulgaris HOM05D007613 ORTHO05D009344 3.7e-35 151.8 128 55.5
Migut.B01150 Erythranthe guttata HOM05D007613 ORTHO05D009344 4.8e-35 151.4 107 66.4
Thhalv10006304m.g Eutrema salsugineum HOM05D007613 ORTHO05D009344 4.8e-35 151.4 128 54.7
AT3G62880 Arabidopsis thaliana HOM05D007613 ORTHO05D009344 8.3e-35 150.6 128 53.9
Duzib133G0913 Durio zibethinus HOM05D007613 ORTHO05D009344 8.3e-35 150.6 128 56.2
AL5G45650 Arabidopsis lyrata HOM05D007613 ORTHO05D009344 1.1e-34 150.2 128 53.9
Lj5g0017580 Lotus japonicus HOM05D007613 ORTHO05D009344 1.4e-34 149.8 130 56.2
Sp5g00640 Schrenkiella parvula HOM05D007613 ORTHO05D009344 1.8e-34 149.4 117 57.3
Cpa.g.sc9.260 Carica papaya HOM05D000286 ORTHO05D000170 2.4e-34 149.1 116 57.8
Medtr1g088460 Medicago truncatula HOM05D007613 ORTHO05D009344 3.1e-34 148.7 128 59.4
CsaV3_7G029280 Cucumis sativus L. HOM05D007613 ORTHO05D009344 5.4e-34 147.9 128 54.7
Gohir.D12G134100 Gossypium hirsutum HOM05D007613 ORTHO05D009344 5.4e-34 147.9 117 59.8
Thecc.01G300700 Theobroma cacao HOM05D007613 ORTHO05D009344 5.4e-34 147.9 109 61.5
Aa31LG10G16510 Aethionema arabicum HOM05D007613 ORTHO05D009344 7.0e-34 147.5 128 52.3
Gorai.008G145100 Gossypium raimondii HOM05D007613 ORTHO05D009344 1.6e-33 146.4 117 59.0
CDE08G0198 Ceratophyllum demersum HOM05D007613 ORTHO05D009344 3.5e-33 145.2 126 54.0
EL10Ac7g17473 Beta vulgaris HOM05D007613 ORTHO05D009344 5.9e-33 144.4 128 53.1
BraA04t15767Z Brassica rapa HOM05D007613 ORTHO05D009344 7.7e-33 144.1 128 52.3
BcaB02g08092 Brassica carinata HOM05D007613 ORTHO05D009344 1.0e-32 143.7 128 52.3
Lalb_Chr06g0166471 Lupinus albus HOM05D007613 ORTHO05D009344 1.3e-32 143.3 122 53.3
CARHR173140 Cardamine hirsuta HOM05D007613 ORTHO05D009344 2.9e-32 142.1 117 54.7
Atru.chr5.1146 Acer truncatum HOM05D007613 ORTHO05D009344 8.6e-32 140.6 117 57.3
Ah.08g213430 Amaranthus hybridus HOM05D000286 ORTHO05D000170 3.2e-31 138.7 120 52.5
THA.LOC104798831 Tarenaya hassleriana HOM05D007613 ORTHO05D009344 4.2e-31 138.3 128 52.3
Glyma.10G018300 Glycine max HOM05D007613 ORTHO05D009344 5.5e-31 137.9 130 53.1
MD03G1288400 Malus domestica HOM05D007613 ORTHO05D009344 5.5e-31 137.9 117 56.4
C04p30380 Brassica napus HOM05D007613 ORTHO05D009344 7.2e-31 137.5 128 51.6
BolC4t24569H Brassica oleracea HOM05D007613 ORTHO05D009344 7.2e-31 137.5 128 51.6
Prupe.8G261600 Prunus persica HOM05D007613 ORTHO05D009344 2.1e-30 136.0 117 54.7
Ca_10334_v3 Cicer arietinum L. HOM05D007613 ORTHO05D009344 8.0e-30 134.0 128 53.1
PSO170G2016 Papaver somniferum HOM05D007613 ORTHO05D009344 8.0e-30 134.0 127 52.0
RcHm_v2.0_Chr6g0294031 Rosa chinensis HOM05D007613 ORTHO05D009344 1.4e-29 133.3 128 52.3
Nn3g21498 Nelumbo nucifera HOM05D007613 ORTHO05D009344 5.2e-29 131.3 89 65.2
CSS0026666 Camellia sinensis var. sinensis HOM05D007613 ORTHO05D009344 1.2e-28 130.2 79 70.9
TWI59G0030 Tripterygium wilfordii HOM05D007613 ORTHO05D009344 1.2e-28 130.2 95 62.1
Lalb_Chr02g0146351 Lupinus albus HOM05D007613 ORTHO05D009344 5.7e-28 127.9 125 47.2
A04p00480 Brassica napus HOM05D007613 ORTHO05D009344 2.0e-25 119.4 104 51.0
Sed0015913 Sechium edule HOM05D007613 ORTHO05D009344 7.8e-25 117.5 97 54.6
Aqoxy2G02939 Aquilegia oxysepala HOM05D007613 ORTHO05D009344 2.3e-24 115.9 120 45.0
COL.COLO4_23344 Corchorus olitorius HOM05D007613 ORTHO05D009344 2.9e-24 115.5 90 55.6
Haze_04939 Corylus avellana HOM05D007613 ORTHO05D009344 6.6e-24 114.4 105 52.4
ATR0706G141 Amborella trichopoda HOM05D007613 ORTHO05D009344 8.6e-24 114.0 123 43.1
FvH4_2g25740 Fragaria vesca HOM05D007613 ORTHO05D009344 2.5e-23 112.5 114 45.6
Rhsim01G0285300 Rhododendron simsii HOM05D007613 ORTHO05D009344 4.3e-23 111.7 98 55.1
ClCG09G005860 Citrullus lanatus HOM05D007613 ORTHO05D009344 2.1e-22 109.4 133 47.4
HanXRQChr13g0413071 Helianthus annuus HOM05D007613 ORTHO05D009344 2.3e-21 105.9 73 65.8
SGA_v2.0_scaffold1G00364 Striga asiatica HOM05D001636 ORTHO05D003817 2.0e-20 102.8 72 68.1
FAN20G1450 Fragaria x ananassa HOM05D007613 ORTHO05D009344 9.8e-20 100.5 142 38.0
SMO347G0100 Selaginella moellendorffii HOM05D007613 ORTHO05D009344 2.2e-19 99.4 112 41.1
Sabra14G0095700 Salix brachista HOM05D007613 ORTHO05D009344 4.9e-19 98.2 128 43.0
SalBow3G3757 Salvia bowleyana HOM05D007613 ORTHO05D009344 2.0e-17 92.8 61 68.9
Actinidia21047 Actinidia chinensis HOM05D007613 ORTHO05D009344 3.5e-17 92.0 63 68.3
FAN27G2766 Fragaria x ananassa HOM05D007613 ORTHO05D009344 5.9e-17 91.3 82 48.8
BcaC02g10319 Brassica carinata HOM05D007613 ORTHO05D009344 1.1e-13 80.5 76 48.7
AUR62008666 Chenopodium quinoa HOM05D007613 ORTHO05D009344 1.8e-13 79.7 76 51.3
Pp3c19_22480 Physcomitrium patens HOM05D007613 ORTHO05D009344 4.0e-13 78.6 108 38.0
SHI15147 Sapria himalayana HOM05D007613 ORTHO05D009344 9.2e-10 67.4 85 41.2
Mapoly0048s0107 Marchantia polymorpha HOM05D007613 ORTHO05D009344 1.2e-09 67.0 84 38.1
Gohir.A12G130300 Gossypium hirsutum HOM05D007613 ORTHO05D009344 1.6e-09 66.6 127 35.4
AUR62033103 Chenopodium quinoa HOM05D007613 ORTHO05D009344 6.0e-09 64.7 41 65.9
Carub.0005s2952 Capsella rubella HOM05D001675 ORTHO05D001808 2.3e-08 62.8 45 60.0
unitig_0.g668 Utricularia gibba HOM05D007613 ORTHO05D009344 5.0e-08 61.6 34 73.5
FAN24G3183 Fragaria x ananassa HOM05D007613 ORTHO05D009344 1.5e-07 60.1 64 42.2
MD11G1309700 Malus domestica HOM05D007613 ORTHO05D009344 1.2e-06 57.0 54 50.0
FAN15G1907 Fragaria x ananassa HOM05D007613 ORTHO05D009344 1.6e-06 56.6 96 32.3
Cfa005911 Carpinus fangiana HOM05D007613 ORTHO05D009344 4.7e-06 55.1 142 32.4


User provided reference genes

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