Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g035880 Solanum pennellii HOM05D006618 ORTHO05D008291 1.6e-86 322.8 175 100.0
Solyc06g084500.3 Solanum lycopersicum HOM05D006618 ORTHO05D008291 2.5e-82 308.9 175 97.1
PGSC0003DMG400024043 Solanum tuberosum HOM05D006618 ORTHO05D008291 6.5e-75 284.3 180 91.7
Nitab4.5_0012299g0010 Nicotiana tabacum HOM05D006618 ORTHO05D008291 7.5e-55 217.6 179 74.3
Peaxi162Scf01039g00026 Petunia axillaris HOM05D006618 ORTHO05D008291 4.8e-54 214.9 184 71.7
CAN.G1209.34 Capsicum annuum HOM05D006618 ORTHO05D008291 3.1e-53 212.2 171 73.7
Nitab4.5_0002093g0230 Nicotiana tabacum HOM05D006618 ORTHO05D008291 3.6e-49 198.7 179 69.3
MSTRG.18188 Avicennia marina HOM05D006618 ORTHO05D008291 1.2e-44 183.7 163 66.3
Hma1.2p1_0399F.1_g144140 Hydrangea macrophylla HOM05D006618 ORTHO05D008291 5.6e-42 174.9 170 61.8
Hund18083 Selenicereus undatus HOM05D006618 ORTHO05D008291 5.6e-42 174.9 168 61.3
Phvul.001G202800 Phaseolus vulgaris HOM05D006618 ORTHO05D008291 2.9e-38 162.5 163 57.7
Sc17g0003540 Simmondsia chinensis HOM05D006618 ORTHO05D008291 2.9e-38 162.5 163 58.3
Glyma.03G209500 Glycine max HOM05D006618 ORTHO05D008291 3.7e-38 162.2 164 58.5
Aqoxy5G00606 Aquilegia oxysepala HOM05D006618 ORTHO05D008291 1.8e-37 159.8 180 52.8
Dinv33000 Davidia involucrata HOM05D006618 ORTHO05D008291 1.8e-37 159.8 182 54.9
VMungo1383G0445 Vigna mungo HOM05D006618 ORTHO05D008291 3.2e-37 159.1 163 55.8
CSS0038517 Camellia sinensis var. sinensis HOM05D006618 ORTHO05D008291 5.4e-37 158.3 166 59.6
CiPaw.08G099900 Carya illinoinensis HOM05D006618 ORTHO05D008291 5.4e-37 158.3 170 56.5
Cc01_g20320 Coffea canephora HOM05D006618 ORTHO05D008291 9.2e-37 157.5 160 60.0
EL10Ac7g17390 Beta vulgaris HOM05D006618 ORTHO05D008291 1.2e-36 157.1 156 59.6
Lsat_1_v5_gn_9_4841 Lactuca sativa HOM05D006618 ORTHO05D008291 4.6e-36 155.2 158 58.2
Glyma.19G206900 Glycine max HOM05D006618 ORTHO05D008291 7.8e-36 154.5 182 52.7
Potri.014G134700 Populus trichocarpa HOM05D006618 ORTHO05D008291 1.0e-35 154.1 164 56.7
Atru.chr5.1237 Acer truncatum HOM05D006618 ORTHO05D008291 1.7e-35 153.3 162 58.0
Nn3g21320 Nelumbo nucifera HOM05D006618 ORTHO05D008291 8.6e-35 151.0 149 57.0
Duzib211G0091 Durio zibethinus HOM05D006618 ORTHO05D008291 1.5e-34 150.2 165 57.0
vmacro02504 Vaccinium macrocarpon HOM05D006618 ORTHO05D008291 1.5e-34 150.2 206 47.1
Ah.08g212660 Amaranthus hybridus HOM05D006618 ORTHO05D008291 2.5e-34 149.4 165 55.2
AUR62036645 Chenopodium quinoa HOM05D006618 ORTHO05D008291 5.6e-34 148.3 166 55.4
PSO210G2131 Papaver somniferum HOM05D006618 ORTHO05D008291 5.6e-34 148.3 169 54.4
Sed0008392 Sechium edule HOM05D006618 ORTHO05D008291 5.6e-34 148.3 181 50.3
Sed0009421 Sechium edule HOM05D006618 ORTHO05D008291 5.6e-34 148.3 186 51.1
Manes.05G067500 Manihot esculenta HOM05D006618 ORTHO05D008291 1.2e-33 147.1 164 55.5
ECA247G1808 Erigeron canadensis HOM05D006618 ORTHO05D008291 2.1e-33 146.4 165 53.9
Duzib138G1186 Durio zibethinus HOM05D006618 ORTHO05D008291 2.8e-33 146.0 164 56.7
PSO170G6580 Papaver somniferum HOM05D006618 ORTHO05D008291 3.6e-33 145.6 169 53.8
SalBow3G3170 Salvia bowleyana HOM05D006618 ORTHO05D008291 3.6e-33 145.6 164 54.9
SGA_v2.0_scaffold11G05756 Striga asiatica HOM05D006618 ORTHO05D008291 3.6e-33 145.6 161 52.8
Thhalv10028994m.g Eutrema salsugineum HOM05D006618 ORTHO05D008291 8.0e-33 144.4 161 50.9
QL12p024238 Quercus lobata HOM05D006618 ORTHO05D008291 1.0e-32 144.1 153 54.9
TAR362G0318 Trochodendron aralioides HOM05D006618 ORTHO05D008291 1.0e-32 144.1 178 51.1
MD03G1276600 Malus domestica HOM05D006618 ORTHO05D008291 1.4e-32 143.7 211 44.5
FAN27G1167 Fragaria x ananassa HOM05D006618 ORTHO05D008291 2.3e-32 142.9 165 51.5
Prupe.8G253400 Prunus persica HOM05D006618 ORTHO05D008291 2.3e-32 142.9 194 47.4
Gorai.007G131200 Gossypium raimondii HOM05D006618 ORTHO05D008291 3.1e-32 142.5 150 53.3
Medtr7g108100 Medicago truncatula HOM05D006618 ORTHO05D008291 3.1e-32 142.5 178 51.7
Carub.0006s3388 Capsella rubella HOM05D006618 ORTHO05D008291 4.0e-32 142.1 173 48.0
FvH4_2g24850 Fragaria vesca HOM05D006618 ORTHO05D008291 4.0e-32 142.1 165 51.5
FAN24G2031 Fragaria x ananassa HOM05D006618 ORTHO05D008291 4.0e-32 142.1 165 51.5
MD11G1299100 Malus domestica HOM05D006618 ORTHO05D008291 4.0e-32 142.1 203 43.8
Aa31LG5G2680 Aethionema arabicum HOM05D006618 ORTHO05D008291 5.2e-32 141.7 171 49.1
COL.COLO4_08018 Corchorus olitorius HOM05D006618 ORTHO05D008291 6.8e-32 141.4 164 53.0
PGR119G1443 Punica granatum HOM05D006618 ORTHO05D008291 8.9e-32 141.0 173 50.9
AL6G49760 Arabidopsis lyrata HOM05D006618 ORTHO05D008291 1.2e-31 140.6 161 47.8
Lj1C37G5 Lonicera japonica HOM05D000143 ORTHO05D000072 2.6e-31 139.4 179 51.4
THA.LOC104801197 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 2.6e-31 139.4 174 50.0
Lj1g0015584 Lotus japonicus HOM05D006618 ORTHO05D008291 4.4e-31 138.7 166 51.2
AT4G03180 Arabidopsis thaliana HOM05D006618 ORTHO05D008291 5.8e-31 138.3 162 47.5
ClCG09G006430 Citrullus lanatus HOM05D006618 ORTHO05D008291 2.9e-30 136.0 183 48.6
FAN15G0256 Fragaria x ananassa HOM05D006618 ORTHO05D008291 2.9e-30 136.0 165 50.9
Cfa006056 Carpinus fangiana HOM05D006618 ORTHO05D008291 1.1e-29 134.0 167 49.1
Lalb_Chr18g0047451 Lupinus albus HOM05D006618 ORTHO05D008291 2.4e-29 132.9 161 52.8
Sp6g03210 Schrenkiella parvula HOM05D006618 ORTHO05D008291 2.4e-29 132.9 171 46.2
Oeu057561.4 Olea europaea HOM05D006618 ORTHO05D008008 4.1e-29 132.1 169 50.9
C03p37140 Brassica napus HOM05D006618 ORTHO05D008291 7.0e-29 131.3 164 47.6
BcaC01g06702 Brassica carinata HOM05D006618 ORTHO05D008291 9.2e-29 131.0 164 47.6
BolC3t16012H Brassica oleracea HOM05D006618 ORTHO05D008291 9.2e-29 131.0 165 47.9
Eucgr.H01207 Eucalyptus grandis HOM05D006618 ORTHO05D008291 9.2e-29 131.0 160 51.9
HanXRQChr15g0466141 Helianthus annuus HOM05D006618 ORTHO05D008291 1.2e-28 130.6 162 51.9
Gohir.A11G117500 Gossypium hirsutum HOM05D006618 ORTHO05D008291 1.6e-28 130.2 189 43.9
Zm00001eb410530 Zea mays HOM05D006618 ORTHO05D008291 1.6e-28 130.2 145 49.7
CsaV3_7G028720 Cucumis sativus L. HOM05D006618 ORTHO05D008291 2.0e-28 129.8 179 48.0
RcHm_v2.0_Chr6g0292701 Rosa chinensis HOM05D006618 ORTHO05D008291 2.0e-28 129.8 179 48.6
Migut.D00152 Erythranthe guttata HOM05D006618 ORTHO05D008291 4.6e-28 128.6 184 47.3
Ca_23188_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 6.0e-28 128.3 166 48.2
Zm00001eb137700 Zea mays HOM05D006618 ORTHO05D008291 6.0e-28 128.3 141 50.4
BcaB05g23692 Brassica carinata HOM05D006618 ORTHO05D008291 7.8e-28 127.9 186 44.6
TPR.G32314 Trifolium pratense HOM05D006618 ORTHO05D008291 7.8e-28 127.9 197 45.7
AUR62034630 Chenopodium quinoa HOM05D006618 ORTHO05D008291 1.3e-27 127.1 204 44.1
Haze_04826 Corylus avellana HOM05D006618 ORTHO05D008291 1.3e-27 127.1 206 44.7
TWI12G0445 Tripterygium wilfordii HOM05D006618 ORTHO05D008291 1.3e-27 127.1 169 47.3
Ciclev10022357m.g Citrus clementina HOM05D006618 ORTHO05D008291 1.7e-27 126.7 162 50.0
MELO3C015900.2 Cucumis melo HOM05D006618 ORTHO05D008291 1.7e-27 126.7 199 45.7
Haze_04795 Corylus avellana HOM05D006618 ORTHO05D008291 2.3e-27 126.3 208 43.3
CARHR251610 Cardamine hirsuta HOM05D006618 ORTHO05D008291 5.0e-27 125.2 179 44.7
Sabra14G0100400 Salix brachista HOM05D006618 ORTHO05D008291 1.5e-26 123.6 164 49.4
Os12g0538100 Oryza sativa ssp. japonica HOM05D006618 ORTHO05D008291 3.3e-26 122.5 145 52.4
Psat3g024440 Pisum sativum HOM05D006618 ORTHO05D008291 8.1e-25 117.9 179 44.7
ATR0706G074 Amborella trichopoda HOM05D006618 ORTHO05D008291 8.9e-24 114.4 186 43.5
BcaB01g02511 Brassica carinata HOM05D006618 ORTHO05D008291 1.5e-23 113.6 172 41.9
Thecc.01G291700 Theobroma cacao HOM05D006618 ORTHO05D008291 2.0e-23 113.2 165 47.3
unitig_22.g5246 Utricularia gibba HOM05D006618 ORTHO05D008291 8.3e-22 107.8 162 43.8
Rhsim13G0016600 Rhododendron simsii HOM05D006618 ORTHO05D008291 1.1e-21 107.5 156 44.2
BcaC03g16213 Brassica carinata HOM05D006618 ORTHO05D008291 2.4e-21 106.3 167 39.5
BolC2t10017H Brassica oleracea HOM05D006618 ORTHO05D008291 2.4e-21 106.3 167 39.5
GSVIVG01010994001 Vitis vinifera HOM05D006618 ORTHO05D008291 3.5e-20 102.4 145 46.9
FAN20G2846 Fragaria x ananassa HOM05D006618 ORTHO05D008291 6.0e-20 101.7 143 49.0
HPP92_017865 Vanilla planifolia HOM05D006618 ORTHO05D008291 7.8e-20 101.3 170 41.2
A02p25130 Brassica napus HOM05D006618 ORTHO05D008291 1.7e-19 100.1 167 38.3
C02p39890 Brassica napus HOM05D006618 ORTHO05D008291 1.7e-19 100.1 167 38.3
BraA02t07501Z Brassica rapa HOM05D006618 ORTHO05D008291 3.0e-19 99.4 167 37.7
CANSAT25G1401 Cannabis sativa HOM05D006618 ORTHO05D008291 3.0e-19 99.4 163 43.6
arahy.Tifrunner.gnm1.ann1.160DKY Arachis hypogaea HOM05D006618 ORTHO05D008291 3.3e-18 95.9 140 41.4
arahy.Tifrunner.gnm1.ann1.1H6IZY Arachis hypogaea HOM05D006618 ORTHO05D008291 3.3e-18 95.9 140 42.1
MBI19_g13630_MAGBIO Magnolia biondii HOM05D006618 ORTHO05D008291 3.3e-18 95.9 154 41.6
Actinidia24851 Actinidia chinensis HOM05D006618 ORTHO05D008291 1.2e-15 87.4 108 50.0
Gohir.D11G122400 Gossypium hirsutum HOM05D006618 ORTHO05D008291 3.4e-15 85.9 108 47.2
Ca_09115_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 5.8e-15 85.1 149 39.6
Atru.chr5.1270 Acer truncatum HOM05D006618 ORTHO05D008291 1.9e-13 80.1 85 61.2
Cfa006024 Carpinus fangiana HOM05D006618 ORTHO05D008291 3.5e-12 75.9 66 59.1
Actinidia21075 Actinidia chinensis HOM05D006618 ORTHO05D008291 7.8e-12 74.7 55 70.9
arahy.Tifrunner.gnm1.ann1.915FC2 Arachis hypogaea HOM05D006618 ORTHO05D008291 6.6e-11 71.6 143 35.7
arahy.Tifrunner.gnm1.ann1.MTA467 Arachis hypogaea HOM05D006618 ORTHO05D008291 8.6e-11 71.2 143 35.7
Mapoly0001s0215 Marchantia polymorpha HOM05D006618 ORTHO05D008291 2.1e-09 66.6 195 33.3
BcaB05g22921 Brassica carinata HOM05D001082 ORTHO05D008291 4.7e-09 65.5 135 34.1
SEGI_31360 Sequoiadendron giganteum HOM05D006618 ORTHO05D008291 1.4e-08 63.9 93 49.5
SHI15557 Sapria himalayana HOM05D006618 ORTHO05D008291 6.8e-08 61.6 72 51.4
THA.LOC104827373 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 1.5e-07 60.5 120 37.5
AagrBONN_evm.TU.Sc2ySwM_117.1999 Anthoceros agrestis HOM05D006618 ORTHO05D008291 9.9e-07 57.8 68 50.0


User provided reference genes

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