Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g084180.3 Solanum lycopersicum HOM05D008542 ORTHO05D009486 1.7e-37 158.7 73 100.0
Sopen06g035560 Solanum pennellii HOM05D008542 ORTHO05D009486 1.7e-37 158.7 73 100.0
PGSC0003DMG400020057 Solanum tuberosum HOM05D008542 ORTHO05D009486 3.1e-31 137.9 67 91.0
Nitab4.5_0008064g0010 Nicotiana tabacum HOM05D008542 ORTHO05D009486 2.7e-22 108.2 78 67.9
CAN.G1549.25 Capsicum annuum HOM05D008542 ORTHO05D009486 6.6e-21 103.6 62 74.2
Peaxi162Scf00783g00135 Petunia axillaris HOM05D008542 ORTHO05D009486 2.1e-19 98.6 73 67.1
Actinidia00784 Actinidia chinensis HOM05D008542 ORTHO05D009486 2.9e-13 78.2 73 52.1
Nitab4.5_0001729g0040 Nicotiana tabacum HOM05D008542 ORTHO05D009486 1.1e-12 76.3 74 51.4
Actinidia09119 Actinidia chinensis HOM05D008542 ORTHO05D009486 5.6e-12 73.9 73 50.7
Oeu029462.1 Olea europaea HOM05D008542 ORTHO05D009486 1.6e-11 72.4 63 55.6
Peaxi162Scf00230g00137 Petunia axillaris HOM05D008542 ORTHO05D009486 2.1e-11 72.0 73 47.9
Nitab4.5_0000252g0080 Nicotiana tabacum HOM05D008542 ORTHO05D009486 1.0e-10 69.7 74 47.3
Actinidia21129 Actinidia chinensis HOM05D008542 ORTHO05D009486 1.4e-10 69.3 69 52.2
Rhsim13G0027000 Rhododendron simsii HOM05D008542 ORTHO05D009486 1.8e-10 68.9 71 50.7
Dinv32906 Davidia involucrata HOM05D008542 ORTHO05D009486 5.2e-10 67.4 63 57.1
TAR260G0004 Trochodendron aralioides HOM05D008542 ORTHO05D009486 1.2e-09 66.2 63 47.6
CiPaw.08G107700 Carya illinoinensis HOM05D008542 ORTHO05D009486 2.0e-09 65.5 67 50.7
Eucgr.K03345 Eucalyptus grandis HOM05D008542 ORTHO05D009486 2.0e-09 65.5 62 50.0
Aqoxy2G03426 Aquilegia oxysepala HOM05D008542 ORTHO05D009486 2.6e-09 65.1 75 46.7
PGR044G1462 Punica granatum HOM05D008542 ORTHO05D009486 2.6e-09 65.1 68 47.1
Hma1.2p1_0667F.1_g199740 Hydrangea macrophylla HOM05D008542 ORTHO05D009486 4.4e-09 64.3 67 49.3
Lj2A1168T24 Lonicera japonica HOM05D008542 ORTHO05D009486 4.4e-09 64.3 70 44.3
Peaxi162Scf00572g00215 Petunia axillaris HOM05D011159 ORTHO05D009486 4.4e-09 64.3 79 48.1
Actinidia24911 Actinidia chinensis HOM05D008542 ORTHO05D009486 5.8e-09 63.9 70 48.6
Potri.002G050150 Populus trichocarpa HOM05D008542 ORTHO05D009486 1.3e-08 62.8 67 44.8
TWI75G0224 Tripterygium wilfordii HOM05D008542 ORTHO05D009486 1.3e-08 62.8 68 47.1
vmacro02595 Vaccinium macrocarpon HOM05D008542 ORTHO05D009486 4.9e-08 60.8 62 51.6
Eucgr.H01456 Eucalyptus grandis HOM05D008542 ORTHO05D009486 1.9e-07 58.9 63 47.6
Sabra05G0162200 Salix brachista HOM05D008542 ORTHO05D009486 1.9e-07 58.9 61 45.9
TWI18G0041 Tripterygium wilfordii HOM05D008542 ORTHO05D009486 1.9e-07 58.9 68 45.6
Sabra08G0118400 Salix brachista HOM05D008542 ORTHO05D009486 4.1e-07 57.8 64 45.3
Potri.008G155600 Populus trichocarpa HOM05D008542 ORTHO05D009486 7.0e-07 57.0 64 45.3
QL12p020979 Quercus lobata HOM05D008542 ORTHO05D009486 9.2e-07 56.6 68 44.1
PGR004G2295 Punica granatum HOM05D008542 ORTHO05D009486 1.2e-06 56.2 71 36.6
PGSC0003DMG400019321 Solanum tuberosum HOM05D008542 ORTHO05D009486 2.7e-06 55.1 67 35.8
Sopen09g027230 Solanum pennellii HOM05D008542 ORTHO05D009486 3.5e-06 54.7 67 35.8
Cpa.g.sc52.57 Carica papaya HOM05D008542 ORTHO05D009486 6.0e-06 53.9 69 42.0
SHI00480 Sapria himalayana HOM05D000105 ORTHO05D000023 6.0e-06 53.9 60 50.0


User provided reference genes

Program Settings