Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g034210 Solanum pennellii HOM05D006969 ORTHO05D008826 1.2e-101 373.2 198 100.0
Solyc06g082850.4 Solanum lycopersicum HOM05D006969 ORTHO05D008826 4.0e-97 358.2 198 97.0
PGSC0003DMG400027666 Solanum tuberosum HOM05D006969 ORTHO05D008826 2.0e-80 302.8 198 84.8
Nitab4.5_0002758g0050 Nicotiana tabacum HOM05D006969 ORTHO05D008826 2.3e-52 209.5 201 65.7
Nitab4.5_0000430g0190 Nicotiana tabacum HOM05D006969 ORTHO05D008826 3.7e-50 202.2 201 64.2
Nitab4.5_0000048g0110 Nicotiana tabacum HOM05D006969 ORTHO05D008826 1.4e-49 200.3 202 63.9
Peaxi162Scf00732g00235 Petunia axillaris HOM05D006969 ORTHO05D008826 6.9e-41 171.4 202 58.4
Dinv16967 Davidia involucrata HOM05D006969 ORTHO05D008826 3.2e-38 162.5 190 55.8
Cc06_g18790 Coffea canephora HOM05D006969 ORTHO05D008826 1.6e-37 160.2 184 58.7
Potri.016G138300 Populus trichocarpa HOM05D006969 ORTHO05D008826 1.1e-35 154.1 186 54.8
Sabra06G0085100 Salix brachista HOM05D006969 ORTHO05D008826 1.6e-32 143.7 180 55.6
Sabra04G0154500 Salix brachista HOM05D006969 ORTHO05D008826 3.5e-32 142.5 191 53.4
Potri.006G109400 Populus trichocarpa HOM05D006969 ORTHO05D008826 7.7e-32 141.4 180 55.0
vmacro08948 Vaccinium macrocarpon HOM05D006969 ORTHO05D008826 3.8e-31 139.0 187 50.3
MSTRG.5490 Avicennia marina HOM05D006969 ORTHO05D008826 1.1e-30 137.5 199 49.2
Cpa.g.sc86.76 Carica papaya HOM05D006969 ORTHO05D008826 1.1e-30 137.5 162 56.2
Manes.09G123300 Manihot esculenta HOM05D006969 ORTHO05D008826 1.5e-30 137.1 185 51.9
Prupe.6G295300 Prunus persica HOM05D006969 ORTHO05D008826 7.2e-30 134.8 192 47.9
TWI74G1273 Tripterygium wilfordii HOM05D006969 ORTHO05D008826 7.2e-30 134.8 188 51.6
MSTRG.18936 Avicennia marina HOM05D006969 ORTHO05D008826 3.6e-29 132.5 172 51.7
Psat3g118680 Pisum sativum HOM05D006969 ORTHO05D008826 1.8e-28 130.2 184 48.4
Haze_21189 Corylus avellana HOM05D006969 ORTHO05D008826 4.0e-28 129.0 192 49.0
MD04G1175800 Malus domestica HOM05D006969 ORTHO05D008826 6.7e-28 128.3 159 54.1
TAR623G0846 Trochodendron aralioides HOM05D006969 ORTHO05D008826 8.8e-28 127.9 181 49.2
HanXRQChr01g0000581 Helianthus annuus HOM05D006969 ORTHO05D008826 5.7e-27 125.2 192 49.5
Thecc.04G150100 Theobroma cacao HOM05D006969 ORTHO05D008826 5.7e-27 125.2 186 51.6
Cfa017015 Carpinus fangiana HOM05D006969 ORTHO05D008826 7.5e-27 124.8 175 48.0
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 7.5e-27 124.8 157 51.0
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 7.5e-27 124.8 157 51.0
Duzib212G0164 Durio zibethinus HOM05D006969 ORTHO05D008826 1.3e-26 124.0 182 49.5
PSO339G3220 Papaver somniferum HOM05D006969 ORTHO05D008826 1.3e-26 124.0 187 47.6
PSO384G0233 Papaver somniferum HOM05D006969 ORTHO05D008826 1.3e-26 124.0 187 48.1
PGR004G2771 Punica granatum HOM05D006969 ORTHO05D008826 1.7e-26 123.6 191 46.6
Medtr7g073500 Medicago truncatula HOM05D006969 ORTHO05D008826 2.2e-26 123.2 174 47.7
FvH4_6g09670 Fragaria vesca HOM05D006969 ORTHO05D008826 3.7e-26 122.5 192 45.3
FAN14G4271 Fragaria x ananassa HOM05D006969 ORTHO05D008826 3.7e-26 122.5 192 45.3
Rhsim04G0121200 Rhododendron simsii HOM05D006969 ORTHO05D008826 3.7e-26 122.5 139 56.8
RcHm_v2.0_Chr3g0460321 Rosa chinensis HOM05D006969 ORTHO05D008826 3.7e-26 122.5 192 44.8
FAN09G3593 Fragaria x ananassa HOM05D006969 ORTHO05D008826 6.3e-26 121.7 192 44.8
Sc20g0007050 Simmondsia chinensis HOM05D006969 ORTHO05D008826 6.3e-26 121.7 197 46.7
CiPaw.10G165400 Carya illinoinensis HOM05D006969 ORTHO05D008826 2.4e-25 119.8 192 47.4
MD05G1222900 Malus domestica HOM05D006969 ORTHO05D008826 4.1e-25 119.0 190 46.3
MD12G1190200 Malus domestica HOM05D006969 ORTHO05D008826 4.1e-25 119.0 190 46.3
FAN05G1635 Fragaria x ananassa HOM05D006969 ORTHO05D008826 7.0e-25 118.2 192 44.3
Glyma.18G213000 Glycine max HOM05D006969 ORTHO05D008826 9.1e-25 117.9 177 45.8
CsaV3_4G027220 Cucumis sativus L. HOM05D006969 ORTHO05D008826 1.2e-24 117.5 177 47.5
ECA248G1739 Erigeron canadensis HOM05D000251 ORTHO05D002506 1.2e-24 117.5 198 46.5
Gohir.D10G112800 Gossypium hirsutum HOM05D006969 ORTHO05D008826 1.2e-24 117.5 161 50.3
Gorai.011G124600 Gossypium raimondii HOM05D006969 ORTHO05D008826 1.2e-24 117.5 161 50.3
FAN02G3877 Fragaria x ananassa HOM05D006969 ORTHO05D008826 1.6e-24 117.1 172 48.3
ClCG04G006330 Citrullus lanatus HOM05D006969 ORTHO05D008826 2.7e-24 116.3 177 48.0
Oeu038184.1 Olea europaea HOM05D006969 ORTHO05D008826 3.5e-24 115.9 166 48.8
Aqoxy2G00712 Aquilegia oxysepala HOM05D006969 ORTHO05D008826 4.5e-24 115.5 175 46.9
QL07p031897 Quercus lobata HOM05D006969 ORTHO05D008826 4.5e-24 115.5 170 49.4
Ciclev10013711m.g Citrus clementina HOM05D006969 ORTHO05D008826 7.7e-24 114.8 159 47.8
Gohir.A10G153400 Gossypium hirsutum HOM05D006969 ORTHO05D008826 1.0e-23 114.4 162 50.0
VMungo1383G3295 Vigna mungo HOM05D006969 ORTHO05D008826 1.0e-23 114.4 160 48.1
Migut.J00029 Erythranthe guttata HOM05D006969 ORTHO05D008826 1.3e-23 114.0 117 56.4
Lj1g0009458 Lotus japonicus HOM05D006969 ORTHO05D008826 1.7e-23 113.6 158 49.4
Phvul.008G081600 Phaseolus vulgaris HOM05D006969 ORTHO05D008826 3.8e-23 112.5 187 43.3
GSVIVG01030170001 Vitis vinifera HOM05D006969 ORTHO05D008826 5.0e-23 112.1 190 44.2
Ah.15g089930 Amaranthus hybridus HOM05D006969 ORTHO05D008826 6.5e-23 111.7 174 45.4
Duzib151G0817 Durio zibethinus HOM05D006969 ORTHO05D008826 8.5e-23 111.3 139 56.1
MELO3C025225.2 Cucumis melo HOM05D006969 ORTHO05D008826 1.1e-22 110.9 192 43.8
AUR62006430 Chenopodium quinoa HOM05D006969 ORTHO05D008826 1.9e-22 110.2 202 43.6
AUR62029780 Chenopodium quinoa HOM05D006969 ORTHO05D008826 1.9e-22 110.2 179 45.3
unitig_22.g6613 Utricularia gibba HOM05D006969 ORTHO05D008826 1.9e-22 110.2 165 46.7
COL.COLO4_03930 Corchorus olitorius HOM05D006969 ORTHO05D008826 2.5e-22 109.8 161 48.4
Hund19755 Selenicereus undatus HOM05D006969 ORTHO05D008826 3.2e-22 109.4 177 45.2
Glyma.09G273800 Glycine max HOM05D006969 ORTHO05D008826 4.2e-22 109.0 174 43.7
EL10Ac7g17114 Beta vulgaris HOM05D006969 ORTHO05D008826 1.6e-21 107.1 213 41.3
Sed0006435 Sechium edule HOM05D006969 ORTHO05D008826 1.6e-21 107.1 196 42.9
TWI77G0392 Tripterygium wilfordii HOM05D006969 ORTHO05D008826 3.6e-21 105.9 123 53.7
arahy.Tifrunner.gnm1.ann1.K8QDZW Arachis hypogaea HOM05D006969 ORTHO05D008826 4.7e-21 105.5 158 50.6
SalBow7G4609 Salvia bowleyana HOM05D006969 ORTHO05D008826 4.7e-21 105.5 170 45.9
Lsat_1_v5_gn_5_152061 Lactuca sativa HOM05D006969 ORTHO05D008826 2.3e-20 103.2 188 42.6
arahy.Tifrunner.gnm1.ann1.F2WGAE Arachis hypogaea HOM05D006969 ORTHO05D008826 3.0e-20 102.8 153 49.7
arahy.Tifrunner.gnm1.ann1.M5JM96 Arachis hypogaea HOM05D006969 ORTHO05D008826 3.0e-20 102.8 154 50.6
Nitab4.5_0002655g0130 Nicotiana tabacum HOM05D006969 ORTHO05D008826 5.2e-20 102.1 112 55.4
TPR.G24295 Trifolium pratense HOM05D006969 ORTHO05D008826 6.8e-20 101.7 119 52.9
AT5G01910 Arabidopsis thaliana HOM05D006969 ORTHO05D008826 8.8e-20 101.3 152 46.7
BcaB01g06123 Brassica carinata HOM05D006969 ORTHO05D008826 2.6e-19 99.8 171 43.3
BraA03t09395Z Brassica rapa HOM05D006969 ORTHO05D008826 4.4e-19 99.0 171 42.7
arahy.Tifrunner.gnm1.ann1.PQ2I5M Arachis hypogaea HOM05D006969 ORTHO05D008826 5.7e-19 98.6 155 49.7
Thhalv10015463m.g Eutrema salsugineum HOM05D006969 ORTHO05D008826 9.8e-19 97.8 150 44.7
Aa31LG5G11450 Aethionema arabicum HOM05D006969 ORTHO05D008826 1.3e-18 97.4 175 45.1
BolC3t12589H Brassica oleracea HOM05D006969 ORTHO05D008826 1.3e-18 97.4 179 41.9
DCAR_023968 Daucus carota HOM05D006969 ORTHO05D008826 1.7e-18 97.1 104 53.8
QL07p007469 Quercus lobata HOM05D006969 ORTHO05D008826 2.2e-18 96.7 136 49.3
Atru.chr8.92 Acer truncatum HOM05D006969 ORTHO05D008826 3.7e-18 95.9 185 40.5
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 3.7e-18 95.9 159 45.9
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 3.7e-18 95.9 159 45.9
Lalb_Chr01g0023811 Lupinus albus HOM05D006969 ORTHO05D008826 2.4e-17 93.2 177 37.3
Gohir.D02G003100 Gossypium hirsutum HOM05D006969 ORTHO05D008826 3.1e-17 92.8 183 39.9
Gorai.005G003600 Gossypium raimondii HOM05D006969 ORTHO05D008826 4.1e-17 92.4 149 44.3
Carub.0024s0013 Capsella rubella HOM05D006969 ORTHO05D008826 1.2e-16 90.9 167 40.1
Gohir.A02G002800 Gossypium hirsutum HOM05D006969 ORTHO05D008826 1.6e-16 90.5 153 45.1
Sp6g41160 Schrenkiella parvula HOM05D006969 ORTHO05D008826 1.6e-16 90.5 156 42.9
BcaB01g04376 Brassica carinata HOM05D006969 ORTHO05D008826 2.0e-16 90.1 145 43.4
AL6G10120 Arabidopsis lyrata HOM05D006969 ORTHO05D008826 2.7e-16 89.7 167 42.5
vmacro08947 Vaccinium macrocarpon HOM05D000266 ORTHO05D008826 7.7e-16 88.2 68 72.1
THA.LOC104823322 Tarenaya hassleriana HOM05D006969 ORTHO05D008826 1.7e-15 87.0 121 47.9
CANSAT25G2928 Cannabis sativa HOM05D006969 ORTHO05D008826 5.0e-15 85.5 205 39.5
A03p00060 Brassica napus HOM05D006969 ORTHO05D008826 8.5e-15 84.7 128 45.3
C03p00200 Brassica napus HOM05D006969 ORTHO05D008826 1.9e-14 83.6 128 45.3
MBI03_g05807_MAGBIO Magnolia biondii HOM05D006969 ORTHO05D008826 9.4e-14 81.3 150 42.7
unitig_8.g3270 Utricularia gibba HOM05D006969 ORTHO05D008826 9.4e-14 81.3 76 59.2
CDE06G1555 Ceratophyllum demersum HOM05D006969 ORTHO05D008826 1.2e-13 80.9 111 47.7
CARHR212260 Cardamine hirsuta HOM05D006969 ORTHO05D008826 2.7e-13 79.7 145 42.8
Nn5g26829 Nelumbo nucifera HOM05D006969 ORTHO05D008826 1.0e-12 77.8 136 44.9
Oeu060427.1 Olea europaea HOM05D006969 ORTHO05D008826 3.0e-12 76.3 75 57.3
CDE07G1521 Ceratophyllum demersum HOM05D006969 ORTHO05D008826 2.6e-11 73.2 160 38.8
Rhsim04G0114700 Rhododendron simsii HOM05D006969 ORTHO05D008826 3.4e-11 72.8 70 60.0
Rhsim08G0240100 Rhododendron simsii HOM05D006969 ORTHO05D008826 8.3e-10 68.2 64 62.5
Rhsim03G0028100 Rhododendron simsii HOM05D006969 ORTHO05D008826 3.1e-09 66.2 64 59.4
Lsat_1_v5_gn_8_110460 Lactuca sativa HOM05D006969 ORTHO05D048249 4.3e-06 55.8 83 45.8


User provided reference genes

Program Settings