Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g033830 Solanum pennellii HOM05D005957 ORTHO05D007318 2.7e-61 238.4 115 100.0
Solyc06g082450.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 2.3e-60 235.3 115 98.3
Nitab4.5_0002091g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 5.4e-46 187.6 110 77.3
Peaxi162Scf01692g00003 Petunia axillaris HOM05D005957 ORTHO05D007318 9.3e-46 186.8 115 78.3
Nitab4.5_0007927g0010 Nicotiana tabacum HOM05D005957 ORTHO05D007318 1.0e-44 183.3 109 82.6
Peaxi162Scf00390g00049 Petunia axillaris HOM05D005957 ORTHO05D007318 1.7e-44 182.6 118 76.3
Nitab4.5_0000002g0080 Nicotiana tabacum HOM05D005957 ORTHO05D007318 1.1e-43 179.9 109 81.7
CAN.G1872.4 Capsicum annuum HOM05D005957 ORTHO05D007318 1.3e-42 176.4 114 73.7
PGSC0003DMG400046061 Solanum tuberosum HOM05D005957 ORTHO05D007318 1.3e-42 176.4 116 72.4
Solyc01g090870.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 1.4e-41 172.9 116 69.8
Sopen01g036610 Solanum pennellii HOM05D005957 ORTHO05D007318 1.4e-41 172.9 116 69.8
Hma1.2p1_0119F.1_g056870 Hydrangea macrophylla HOM05D005957 ORTHO05D007318 9.9e-40 166.8 108 75.9
Dinv04837 Davidia involucrata HOM05D005957 ORTHO05D007318 4.9e-39 164.5 110 70.0
CSS0038993 Camellia sinensis var. sinensis HOM05D005957 ORTHO05D007318 1.1e-38 163.3 109 70.6
Nitab4.5_0002759g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 5.5e-38 161.0 96 78.1
Cc01_g15210 Coffea canephora HOM05D005957 ORTHO05D007318 3.3e-35 151.8 103 68.9
Haze_24453 Corylus avellana HOM05D005957 ORTHO05D007318 4.3e-35 151.4 105 71.4
Oeu064677.1 Olea europaea HOM05D005957 ORTHO05D007318 4.3e-35 151.4 114 63.2
Cfa011817 Carpinus fangiana HOM05D005957 ORTHO05D007318 5.6e-35 151.0 105 70.5
Lsat_1_v5_gn_0_40840 Lactuca sativa HOM05D005957 ORTHO05D007318 1.3e-34 149.8 115 64.3
Ah.08g217120 Amaranthus hybridus HOM05D005957 ORTHO05D007318 1.6e-34 149.4 95 71.6
CiPaw.14G051700 Carya illinoinensis HOM05D005957 ORTHO05D007318 1.8e-33 146.0 92 77.2
Duzib168G0649 Durio zibethinus HOM05D005957 ORTHO05D007318 4.0e-33 144.8 110 65.5
TWI79G1455 Tripterygium wilfordii HOM05D005957 ORTHO05D007318 5.3e-33 144.4 96 72.9
GSVIVG01024580001 Vitis vinifera HOM05D005957 ORTHO05D007318 6.9e-33 144.1 106 66.0
QL01p025125 Quercus lobata HOM05D005957 ORTHO05D007318 1.2e-32 143.3 95 69.5
Potri.013G155300 Populus trichocarpa HOM05D005957 ORTHO05D007318 2.6e-32 142.1 97 70.1
Atru.chr1.2524 Acer truncatum HOM05D005957 ORTHO05D007318 3.4e-32 141.7 101 68.3
Manes.18G139500 Manihot esculenta HOM05D005957 ORTHO05D007318 3.4e-32 141.7 85 78.8
LjContig00141g0008224 Lotus japonicus HOM05D005957 ORTHO05D007318 4.5e-32 141.4 98 71.4
EL10Ac7g16454 Beta vulgaris HOM05D005957 ORTHO05D007318 5.8e-32 141.0 101 64.4
HanXRQChr01g0028631 Helianthus annuus HOM05D005957 ORTHO05D007318 7.6e-32 140.6 116 60.3
Cpa.g.sc2.317 Carica papaya HOM05D005957 ORTHO05D007318 1.3e-31 139.8 91 71.4
ECA236G1285 Erigeron canadensis HOM05D005957 ORTHO05D007318 1.3e-31 139.8 110 62.7
Potri.019G128400 Populus trichocarpa HOM05D005957 ORTHO05D007318 1.3e-31 139.8 97 71.1
MSTRG.17909 Avicennia marina HOM05D005957 ORTHO05D007318 1.7e-31 139.4 112 59.8
Migut.D00827 Erythranthe guttata HOM05D005957 ORTHO05D007318 1.7e-31 139.4 105 62.9
Sabra13G0125100 Salix brachista HOM05D005957 ORTHO05D007318 1.7e-31 139.4 104 63.5
TAR623G0423 Trochodendron aralioides HOM05D005957 ORTHO05D007318 2.2e-31 139.0 93 72.0
Nn5g26879 Nelumbo nucifera HOM05D005957 ORTHO05D007318 2.9e-31 138.7 95 69.5
Psat2g052120 Pisum sativum HOM05D005957 ORTHO05D007318 2.9e-31 138.7 115 61.7
FAN25G1085 Fragaria x ananassa HOM05D005957 ORTHO05D007318 4.9e-31 137.9 105 65.7
Sabra19G0126000 Salix brachista HOM05D005957 ORTHO05D007318 8.4e-31 137.1 94 72.3
Thecc.09G362300 Theobroma cacao HOM05D005957 ORTHO05D007318 8.4e-31 137.1 95 70.5
FAN21G1009 Fragaria x ananassa HOM05D005957 ORTHO05D007318 1.1e-30 136.7 100 68.0
Rhsim13G0060900 Rhododendron simsii HOM05D005957 ORTHO05D007318 1.4e-30 136.3 103 68.0
CANSAT54G0691 Cannabis sativa HOM05D005957 ORTHO05D007318 3.2e-30 135.2 114 60.5
FvH4_3g40300 Fragaria vesca HOM05D005957 ORTHO05D007318 3.2e-30 135.2 100 67.0
FAN11G2330 Fragaria x ananassa HOM05D005957 ORTHO05D007318 3.2e-30 135.2 100 67.0
FAN16G3236 Fragaria x ananassa HOM05D005957 ORTHO05D007318 3.2e-30 135.2 100 67.0
CiPaw.13G065100 Carya illinoinensis HOM05D005957 ORTHO05D007318 4.2e-30 134.8 85 75.3
Glyma.14G203500 Glycine max HOM05D005957 ORTHO05D007318 9.3e-30 133.7 98 69.4
HanXRQChr17g0565391 Helianthus annuus HOM05D005957 ORTHO05D007318 9.3e-30 133.7 111 58.6
COL.COLO4_11196 Corchorus olitorius HOM05D005957 ORTHO05D007318 1.2e-29 133.3 110 61.8
RcHm_v2.0_Chr5g0072641 Rosa chinensis HOM05D005957 ORTHO05D007318 1.2e-29 133.3 100 67.0
Glyma.02G235500 Glycine max HOM05D005957 ORTHO05D007318 1.6e-29 132.9 98 70.4
Oeu011373.1 Olea europaea HOM05D005957 ORTHO05D007318 1.6e-29 132.9 107 64.5
Aqoxy2G00718 Aquilegia oxysepala HOM05D005957 ORTHO05D007318 2.7e-29 132.1 85 72.9
Prupe.6G042800 Prunus persica HOM05D005957 ORTHO05D007318 4.6e-29 131.3 102 65.7
TPR.G25771 Trifolium pratense HOM05D005957 ORTHO05D007318 4.6e-29 131.3 101 69.3
Medtr5g075190 Medicago truncatula HOM05D005957 ORTHO05D007318 7.9e-29 130.6 99 64.6
VMungo0647G0754 Vigna mungo HOM05D005957 ORTHO05D007318 1.0e-28 130.2 98 68.4
MD11G1055300 Malus domestica HOM05D005957 ORTHO05D007318 1.3e-28 129.8 106 65.1
MBI03_g02190_MAGBIO Magnolia biondii HOM05D005957 ORTHO05D007318 2.3e-28 129.0 92 65.2
Ciclev10003853m.g Citrus clementina HOM05D005957 ORTHO05D007318 3.9e-28 128.3 84 71.4
Dinv28722 Davidia involucrata HOM05D005957 ORTHO05D007318 3.9e-28 128.3 87 77.0
vmacro02888 Vaccinium macrocarpon HOM05D005957 ORTHO05D007318 3.9e-28 128.3 103 62.1
Ca_05700_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 6.7e-28 127.5 100 62.0
Ca_30026_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 6.7e-28 127.5 100 62.0
Migut.N00743 Erythranthe guttata HOM05D005957 ORTHO05D007318 6.7e-28 127.5 117 59.0
Lalb_Chr17g0345591 Lupinus albus HOM05D005957 ORTHO05D007318 1.1e-27 126.7 98 63.3
PSO170G5428 Papaver somniferum HOM05D005957 ORTHO05D007318 1.1e-27 126.7 89 66.3
Aa31LG5G6330 Aethionema arabicum HOM05D005957 ORTHO05D007318 1.5e-27 126.3 87 71.3
Dinv12270 Davidia involucrata HOM05D005957 ORTHO05D007318 1.5e-27 126.3 87 70.1
MD03G1053700 Malus domestica HOM05D005957 ORTHO05D007318 1.9e-27 125.9 110 60.0
PSO017G7297 Papaver somniferum HOM05D005957 ORTHO05D007318 1.9e-27 125.9 89 66.3
Phvul.008G248400 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 1.9e-27 125.9 98 66.3
SalBow6G3501 Salvia bowleyana HOM05D005957 ORTHO05D007318 1.9e-27 125.9 97 66.0
ClCG02G019100 Citrullus lanatus HOM05D005957 ORTHO05D007318 2.5e-27 125.6 86 67.4
Sed0019639 Sechium edule HOM05D005957 ORTHO05D007318 4.3e-27 124.8 72 76.4
Gohir.D05G134050 Gossypium hirsutum HOM05D005957 ORTHO05D007318 7.4e-27 124.0 98 65.3
Gorai.009G137600 Gossypium raimondii HOM05D005957 ORTHO05D007318 1.3e-26 123.2 98 65.3
Carub.0004s1155 Capsella rubella HOM05D005957 ORTHO05D007318 3.7e-26 121.7 86 69.8
MELO3C026874.2 Cucumis melo HOM05D005957 ORTHO05D007318 4.8e-26 121.3 86 65.1
Eucgr.J01842 Eucalyptus grandis HOM05D005957 ORTHO05D007318 4.8e-26 121.3 109 56.0
CARHR123750 Cardamine hirsuta HOM05D005957 ORTHO05D007318 8.2e-26 120.6 86 69.8
Gohir.A05G129400 Gossypium hirsutum HOM05D005957 ORTHO05D007318 8.2e-26 120.6 96 66.7
CsaV3_6G019090 Cucumis sativus L. HOM05D005957 ORTHO05D007318 1.8e-25 119.4 86 62.8
BcaC02g11133 Brassica carinata HOM05D005957 ORTHO05D007318 2.4e-25 119.0 86 68.6
PGR119G2032 Punica granatum HOM05D005957 ORTHO05D007318 2.4e-25 119.0 65 81.5
THA.LOC104800785 Tarenaya hassleriana HOM05D005957 ORTHO05D007318 2.4e-25 119.0 94 61.7
AL4G25260 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 5.3e-25 117.9 85 65.9
AT2G30395 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 5.3e-25 117.9 85 65.9
BolC4t23551H Brassica oleracea HOM05D005957 ORTHO05D007318 5.3e-25 117.9 86 67.4
A05p15090 Brassica napus HOM05D005957 ORTHO05D007318 6.9e-25 117.5 86 67.4
C04p20120 Brassica napus HOM05D005957 ORTHO05D007318 6.9e-25 117.5 86 67.4
Sp4g12950 Schrenkiella parvula HOM05D005957 ORTHO05D007318 6.9e-25 117.5 86 66.3
SGA_v2.0_scaffold77G25368 Striga asiatica HOM05D005957 ORTHO05D007318 6.9e-25 117.5 101 63.4
Thhalv10017867m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 9.0e-25 117.1 82 67.1
Phvul.006G076900 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 1.5e-24 116.3 87 64.4
Ah.15g095100 Amaranthus hybridus HOM05D005957 ORTHO05D007318 3.4e-24 115.2 78 66.7
ATR0681G143 Amborella trichopoda HOM05D005957 ORTHO05D007318 7.6e-24 114.0 108 54.6
BcaB02g10322 Brassica carinata HOM05D005957 ORTHO05D007318 7.6e-24 114.0 100 61.0
BcaB06g28364 Brassica carinata HOM05D005957 ORTHO05D007318 1.3e-23 113.2 89 58.4
DCAR_023195 Daucus carota HOM05D005957 ORTHO05D007318 2.2e-23 112.5 62 79.0
BraA05t20430Z Brassica rapa HOM05D005957 ORTHO05D007318 2.9e-23 112.1 89 61.8
Sc21g0004870 Simmondsia chinensis HOM05D005957 ORTHO05D007318 5.0e-23 111.3 110 50.9
Thhalv10017852m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 8.4e-23 110.5 82 65.9
A04p23170 Brassica napus HOM05D005957 ORTHO05D007318 1.4e-22 109.8 89 59.6
BraA04t17844Z Brassica rapa HOM05D005957 ORTHO05D007318 5.5e-22 107.8 89 58.4
BcaC02g08022 Brassica carinata HOM05D005957 ORTHO05D007318 1.2e-21 106.7 89 58.4
C04p59320 Brassica napus HOM05D005957 ORTHO05D007318 1.2e-21 106.7 89 58.4
BolC4t27440H Brassica oleracea HOM05D005957 ORTHO05D007318 1.2e-21 106.7 89 58.4
AUR62007156 Chenopodium quinoa HOM05D003140 ORTHO05D003851 2.7e-21 105.5 89 58.4
AT1G06923 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 4.6e-21 104.8 88 52.3
Carub.0001s0622 Capsella rubella HOM05D005957 ORTHO05D007318 7.9e-21 104.0 82 56.1
Thhalv10009633m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 1.3e-20 103.2 90 55.6
Os07g0679100 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 2.3e-20 102.4 108 50.9
AL1G16950 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 3.0e-20 102.1 82 54.9
Zm00001eb350230 Zea mays HOM05D005957 ORTHO05D007318 3.0e-20 102.1 98 53.1
CARHR006600 Cardamine hirsuta HOM05D005957 ORTHO05D007318 6.7e-20 100.9 87 52.9
Os05g0328300 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 1.1e-19 100.1 67 67.2
Sp1g05630 Schrenkiella parvula HOM05D005957 ORTHO05D007318 1.3e-18 96.7 63 66.7
BcaC07g42550 Brassica carinata HOM05D005957 ORTHO05D007318 1.1e-17 93.6 62 62.9
A09p66670 Brassica napus HOM05D005957 ORTHO05D007318 2.6e-16 89.0 62 61.3
BraA09t42007Z Brassica rapa HOM05D005957 ORTHO05D007318 2.6e-16 89.0 62 61.3
Zm00001eb330630 Zea mays HOM05D005957 ORTHO05D007318 1.3e-15 86.7 69 58.0
BcaC07g42036 Brassica carinata HOM05D005957 ORTHO05D007318 1.7e-15 86.3 62 59.7
BcaC07g42037 Brassica carinata HOM05D005957 ORTHO05D007318 1.7e-15 86.3 62 59.7
C08p50900 Brassica napus HOM05D005957 ORTHO05D007318 1.7e-15 86.3 62 59.7
BolC8t52618H Brassica oleracea HOM05D005957 ORTHO05D007318 1.7e-15 86.3 62 59.7
SEGI_34718 Sequoiadendron giganteum HOM05D005957 ORTHO05D007318 1.8e-09 66.2 73 38.4


User provided reference genes

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