Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g032730 Solanum pennellii HOM05D004372 ORTHO05D004331 3.9e-38 161.0 83 100.0
Solyc06g076310.1 Solanum lycopersicum HOM05D004372 ORTHO05D004331 5.1e-38 160.6 82 100.0
PGSC0003DMG400030326 Solanum tuberosum HOM05D004372 ORTHO05D004331 6.9e-35 150.2 86 94.2
CAN.G394.69 Capsicum annuum HOM05D004372 ORTHO05D004331 7.2e-24 113.6 83 77.1
Nitab4.5_0016190g0010 Nicotiana tabacum HOM05D004372 ORTHO05D004331 4.0e-22 107.8 75 80.0
Nitab4.5_0001326g0030 Nicotiana tabacum HOM05D004372 ORTHO05D004331 5.7e-21 104.0 75 80.0
Peaxi162Scf00774g00035 Petunia axillaris HOM05D004372 ORTHO05D004331 2.7e-18 95.1 67 82.1
CiPaw.13G091200 Carya illinoinensis HOM05D004372 ORTHO05D004331 5.9e-10 67.4 66 60.6
Lsat_1_v5_gn_5_169301 Lactuca sativa HOM05D004372 ORTHO05D004331 1.3e-09 66.2 71 53.5
Cc01_g13170 Coffea canephora HOM05D004372 ORTHO05D004331 2.2e-09 65.5 63 47.6
Nn2g11160 Nelumbo nucifera HOM05D004372 ORTHO05D004331 2.2e-09 65.5 75 46.7
Thecc.09G318100 Theobroma cacao HOM05D004372 ORTHO05D004331 2.9e-09 65.1 78 50.0
CiPaw.15G088800 Carya illinoinensis HOM05D004372 ORTHO05D004331 3.8e-09 64.7 61 60.7
Oeu026714.1 Olea europaea HOM05D004372 ORTHO05D004331 6.5e-09 63.9 75 45.3
Nn2g13398 Nelumbo nucifera HOM05D004372 ORTHO05D004331 1.9e-08 62.4 65 50.8
COL.COLO4_18555 Corchorus olitorius HOM05D004372 ORTHO05D004331 3.2e-08 61.6 79 49.4
Ciclev10029728m.g Citrus clementina HOM05D004372 ORTHO05D004331 4.2e-08 61.2 57 56.1
Prupe.6G072300 Prunus persica HOM05D004372 ORTHO05D004331 5.5e-08 60.8 68 45.6
Lsat_1_v5_gn_8_15240 Lactuca sativa HOM05D004372 ORTHO05D004331 1.2e-07 59.7 58 46.6
MD11G1097200 Malus domestica HOM05D004372 ORTHO05D004331 2.1e-07 58.9 62 45.2
QL01p030934 Quercus lobata HOM05D004372 ORTHO05D004331 2.1e-07 58.9 59 45.8
Cpa.g.sc81.114 Carica papaya HOM05D004372 ORTHO05D004331 2.7e-07 58.5 62 43.5
FAN16G1658 Fragaria x ananassa HOM05D023252 ORTHO05D025479 2.7e-07 58.5 61 55.7
Gorai.009G097700 Gossypium raimondii HOM05D004372 ORTHO05D004331 2.7e-07 58.5 74 45.9
QL07p048809 Quercus lobata HOM05D004372 ORTHO05D004331 2.7e-07 58.5 59 55.9
Aa31LG1G6940 Aethionema arabicum HOM05D004372 ORTHO05D004331 4.7e-07 57.8 64 37.5
Prupe.6G257600 Prunus persica HOM05D004372 ORTHO05D004331 4.7e-07 57.8 59 44.1
Lalb_Chr14g0375161 Lupinus albus HOM05D004372 ORTHO05D004331 6.1e-07 57.4 57 63.2
MD04G1131100 Malus domestica HOM05D004372 ORTHO05D004331 6.1e-07 57.4 60 46.7
TAR636G3128 Trochodendron aralioides HOM05D004372 ORTHO05D004331 6.1e-07 57.4 75 41.3
Gohir.D05G094500 Gossypium hirsutum HOM05D004372 ORTHO05D004331 8.0e-07 57.0 74 44.6
AL1G17680 Arabidopsis lyrata HOM05D004372 ORTHO05D004331 1.4e-06 56.2 64 40.6
BcaB03g13391 Brassica carinata HOM05D004372 ORTHO05D004331 1.4e-06 56.2 53 49.1
Glyma.02G248800 Glycine max HOM05D004372 ORTHO05D004331 1.4e-06 56.2 76 44.7
TAR633G2336 Trochodendron aralioides HOM05D004372 ORTHO05D004331 1.4e-06 56.2 59 44.1
Carub.0001s0682 Capsella rubella HOM05D004372 ORTHO05D004331 1.8e-06 55.8 52 46.2
Haze_20817 Corylus avellana HOM05D004372 ORTHO05D004331 2.3e-06 55.5 63 46.0
Atru.chr12.419 Acer truncatum HOM05D004372 ORTHO05D004331 3.0e-06 55.1 59 42.4
CiPaw.01G289300 Carya illinoinensis HOM05D004372 ORTHO05D004331 3.0e-06 55.1 70 41.4
Duzib150G1613 Durio zibethinus HOM05D004372 ORTHO05D004331 3.0e-06 55.1 64 43.8
Glyma.14G067700 Glycine max HOM05D004372 ORTHO05D004331 3.0e-06 55.1 59 59.3
Sed0010480 Sechium edule HOM05D004372 ORTHO05D004331 3.0e-06 55.1 62 56.5
A10p06030 Brassica napus HOM05D004372 ORTHO05D004331 4.0e-06 54.7 52 48.1
BraA10t42865Z Brassica rapa HOM05D004372 ORTHO05D004331 4.0e-06 54.7 52 48.1
Zm00001eb148250 Zea mays HOM05D004372 ORTHO05D004331 4.0e-06 54.7 57 45.6
BcaB02g06736 Brassica carinata HOM05D004372 ORTHO05D004331 5.2e-06 54.3 52 48.1
Gohir.A05G094000 Gossypium hirsutum HOM05D004372 ORTHO05D004331 5.2e-06 54.3 74 37.8
Atru.chr3.3970 Acer truncatum HOM05D004372 ORTHO05D004331 6.8e-06 53.9 79 46.8
HanXRQChr08g0220931 Helianthus annuus HOM05D004372 ORTHO05D004331 6.8e-06 53.9 59 45.8
Os01g0843700 Oryza sativa ssp. japonica HOM05D004372 ORTHO05D004331 6.8e-06 53.9 57 45.6
ClCG10G021220 Citrullus lanatus HOM05D004372 ORTHO05D004331 8.8e-06 53.5 59 44.1
CsaV3_3G034820 Cucumis sativus L. HOM05D004372 ORTHO05D004331 8.8e-06 53.5 59 49.2


User provided reference genes

Program Settings