Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g032320 Solanum pennellii HOM05D012723 ORTHO05D011266 2.0e-67 259.2 154 100.0
Solyc06g075910.1 Solanum lycopersicum HOM05D012723 ORTHO05D011266 1.2e-61 240.0 157 77.1
Sopen06g032340 Solanum pennellii HOM05D012723 ORTHO05D011266 3.1e-28 129.0 98 59.2
Solyc06g075900.1 Solanum lycopersicum HOM05D035698 ORTHO05D011266 1.3e-23 113.6 102 51.0
Sopen06g032300 Solanum pennellii HOM05D035698 ORTHO05D011266 1.3e-23 113.6 102 50.0
PGSC0003DMG400041447 Solanum tuberosum HOM05D012723 ORTHO05D011266 8.7e-23 110.9 113 50.4
PGSC0003DMG400043558 Solanum tuberosum HOM05D012723 ORTHO05D011266 6.0e-16 88.2 110 44.5
Sopen06g032100 Solanum pennellii HOM05D012723 ORTHO05D011266 1.4e-12 77.0 113 34.5
Solyc06g075700.2 Solanum lycopersicum HOM05D012723 ORTHO05D011266 1.8e-12 76.6 113 34.5
Nitab4.5_0001304g0010 Nicotiana tabacum HOM05D008565 ORTHO05D011266 5.3e-12 75.1 72 44.4
PGSC0003DMG400039447 Solanum tuberosum HOM05D008565 ORTHO05D021008 6.9e-12 74.7 108 38.0
PGSC0003DMG400041091 Solanum tuberosum HOM05D012723 ORTHO05D011266 1.2e-11 73.9 105 37.1
Nitab4.5_0009655g0020 Nicotiana tabacum HOM05D008565 ORTHO05D011266 2.6e-11 72.8 100 39.0
Sopen06g032160 Solanum pennellii HOM05D012723 ORTHO05D011266 2.6e-11 72.8 115 40.9
PGSC0003DMG400040747 Solanum tuberosum HOM05D012723 ORTHO05D011266 2.6e-11 72.8 113 40.7
Solyc06g075890.1 Solanum lycopersicum HOM05D012723 ORTHO05D011266 3.4e-11 72.4 87 43.7
Sopen06g032250 Solanum pennellii HOM05D008565 ORTHO05D011266 7.6e-11 71.2 94 40.4
Solyc06g075820.1 Solanum lycopersicum HOM05D008565 ORTHO05D011266 1.3e-10 70.5 94 39.4
Sopen06g032290 Solanum pennellii HOM05D008565 ORTHO05D021008 1.3e-10 70.5 101 41.6
CAN.G394.36 Capsicum annuum HOM05D012723 ORTHO05D011266 1.7e-10 70.1 92 39.1
Solyc06g075430.3 Solanum lycopersicum HOM05D039704 ORTHO05D024760 1.7e-10 70.1 113 34.5
CAN.G394.29 Capsicum annuum HOM05D008565 ORTHO05D011266 2.2e-10 69.7 80 45.0
Solyc06g075880.1 Solanum lycopersicum HOM05D008565 ORTHO05D021008 4.9e-10 68.6 101 40.6
Solyc03g115970.2 Solanum lycopersicum HOM05D008565 ORTHO05D021008 1.4e-09 67.0 98 41.8
Sopen03g034960 Solanum pennellii HOM05D008565 ORTHO05D021008 4.2e-09 65.5 98 40.8
Solyc04g057920.1 Solanum lycopersicum HOM05D008565 ORTHO05D018131 5.5e-09 65.1 93 39.8
Solyc06g075770.1 Solanum lycopersicum HOM05D008565 ORTHO05D051169 5.5e-09 65.1 108 34.3
Solyc06g075840.1 Solanum lycopersicum HOM05D017346 ORTHO05D024760 7.1e-09 64.7 115 32.2
Sopen06g032190 Solanum pennellii HOM05D008565 ORTHO05D051169 7.1e-09 64.7 108 33.3
Sopen06g032270 Solanum pennellii HOM05D017346 ORTHO05D024760 9.3e-09 64.3 97 34.0
Sopen04g025760 Solanum pennellii HOM05D008565 ORTHO05D018131 1.2e-08 63.9 107 36.4
Solyc04g057900.1 Solanum lycopersicum HOM05D008565 ORTHO05D018131 1.6e-08 63.5 93 37.6
PGSC0003DMG400035120 Solanum tuberosum HOM05D035698 ORTHO05D011266 2.7e-08 62.8 49 59.2
Solyc06g075950.2 Solanum lycopersicum HOM05D008565 ORTHO05D011266 6.0e-08 61.6 87 37.9
PGSC0003DMG400036779 Solanum tuberosum HOM05D008565 ORTHO05D017126 1.8e-07 60.1 66 43.9
PGSC0003DMG400041339 Solanum tuberosum HOM05D008565 ORTHO05D011266 3.9e-07 58.9 81 39.5
Actinidia37221 Actinidia chinensis HOM05D010595 ORTHO05D011290 5.1e-07 58.5 95 29.5
PGSC0003DMG400046112 Solanum tuberosum HOM05D044745 ORTHO05D398714 1.1e-06 57.4 41 65.9
Sopen04g025770 Solanum pennellii HOM05D008565 ORTHO05D018131 1.5e-06 57.0 93 36.6
Sopen06g032370 Solanum pennellii HOM05D017346 ORTHO05D011266 1.9e-06 56.6 63 41.3
Sopen04g025780 Solanum pennellii HOM05D008565 ORTHO05D018131 3.3e-06 55.8 66 42.4
PGSC0003DMG400043572 Solanum tuberosum HOM05D008565 ORTHO05D011266 4.3e-06 55.5 62 41.9
Sopen06g032150 Solanum pennellii HOM05D008565 ORTHO05D021008 7.4e-06 54.7 114 33.3
Sopen06g032180 Solanum pennellii HOM05D008565 ORTHO05D011266 9.6e-06 54.3 108 32.4


User provided reference genes

Program Settings