Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g032120 Solanum pennellii HOM05D008565 ORTHO05D017126 1.8e-81 306.6 258 100.0
Solyc06g075720.3 Solanum lycopersicum HOM05D008565 ORTHO05D017126 4.9e-71 271.9 231 92.6
PGSC0003DMG400045398 Solanum tuberosum HOM05D008565 ORTHO05D017126 6.7e-44 181.8 130 72.3
PGSC0003DMG400036779 Solanum tuberosum HOM05D008565 ORTHO05D017126 1.4e-30 137.5 112 60.7
Solyc06g075870.1 Solanum lycopersicum HOM05D008565 ORTHO05D021008 6.5e-23 112.1 123 51.2
Sopen06g032290 Solanum pennellii HOM05D008565 ORTHO05D021008 2.5e-22 110.2 123 50.4
Sopen06g032110 Solanum pennellii HOM05D008565 ORTHO05D017126 3.0e-20 103.2 127 44.1
Solyc04g057920.1 Solanum lycopersicum HOM05D008565 ORTHO05D018131 2.0e-16 90.5 104 48.1
Solyc06g075920.2 Solanum lycopersicum HOM05D008565 ORTHO05D026158 1.3e-15 87.8 110 48.2
Sopen04g025780 Solanum pennellii HOM05D008565 ORTHO05D018131 2.2e-15 87.0 88 48.9
PGSC0003DMG400039648 Solanum tuberosum HOM05D008565 ORTHO05D017126 3.8e-15 86.3 131 43.5
PGSC0003DMG400039884 Solanum tuberosum HOM05D008565 ORTHO05D018131 2.5e-14 83.6 91 49.5
PGSC0003DMG400045046 Solanum tuberosum HOM05D008565 ORTHO05D017126 2.5e-14 83.6 101 48.5
PGSC0003DMG400044843 Solanum tuberosum HOM05D008565 ORTHO05D017126 2.3e-12 77.0 108 47.2
Sopen06g032180 Solanum pennellii HOM05D008565 ORTHO05D011266 2.6e-11 73.6 143 36.4
Sopen06g032190 Solanum pennellii HOM05D008565 ORTHO05D051169 4.4e-11 72.8 119 40.3
Solyc04g057910.4 Solanum lycopersicum HOM05D008565 ORTHO05D018131 9.8e-11 71.6 116 41.4
Sopen04g025770 Solanum pennellii HOM05D008565 ORTHO05D018131 9.8e-11 71.6 116 41.4
PGSC0003DMG400041339 Solanum tuberosum HOM05D008565 ORTHO05D011266 1.7e-10 70.9 89 44.9
PGSC0003DMG400041447 Solanum tuberosum HOM05D012723 ORTHO05D011266 4.8e-10 69.3 129 34.9
Sopen06g032250 Solanum pennellii HOM05D008565 ORTHO05D011266 4.1e-09 66.2 131 36.6
Solyc06g075820.1 Solanum lycopersicum HOM05D008565 ORTHO05D011266 7.0e-09 65.5 136 35.3
CAN.G394.39 Capsicum annuum HOM05D008565 ORTHO05D011266 9.1e-09 65.1 109 35.8
Nitab4.5_0001304g0010 Nicotiana tabacum HOM05D008565 ORTHO05D011266 2.7e-08 63.5 101 42.6
Solyc06g075430.3 Solanum lycopersicum HOM05D039704 ORTHO05D024760 2.7e-08 63.5 136 33.8
Solyc06g075770.1 Solanum lycopersicum HOM05D008565 ORTHO05D051169 3.5e-08 63.2 129 35.7
Sopen06g031830 Solanum pennellii HOM05D000012 ORTHO05D001652 1.7e-07 60.8 132 34.1
Nitab4.5_0009655g0020 Nicotiana tabacum HOM05D008565 ORTHO05D011266 2.2e-07 60.5 85 41.2
CAN.G394.42 Capsicum annuum HOM05D017346 ORTHO05D024760 2.9e-07 60.1 122 34.4
Solyc06g075710.1 Solanum lycopersicum HOM05D008565 ORTHO05D017126 8.5e-07 58.5 89 39.3
Sopen06g032340 Solanum pennellii HOM05D012723 ORTHO05D011266 1.9e-06 57.4 88 38.6
PGSC0003DMG400043558 Solanum tuberosum HOM05D012723 ORTHO05D011266 2.5e-06 57.0 92 37.0
CAN.G394.31 Capsicum annuum HOM05D008565 ORTHO05D011266 3.2e-06 56.6 100 36.0
Sopen06g032160 Solanum pennellii HOM05D012723 ORTHO05D011266 3.2e-06 56.6 130 34.6


User provided reference genes

Program Settings