Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g027890 Solanum pennellii HOM05D004617 ORTHO05D005531 2.2e-166 589.0 315 100.0
Solyc06g071600.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 8.2e-161 570.5 315 96.2
PGSC0003DMG400027080 Solanum tuberosum HOM05D004617 ORTHO05D005531 3.4e-151 538.5 313 93.3
CAN.G993.37 Capsicum annuum HOM05D004617 ORTHO05D005531 1.1e-128 463.8 308 81.8
Nitab4.5_0001284g0070 Nicotiana tabacum HOM05D004617 ORTHO05D005531 1.4e-99 367.1 308 66.6
Nitab4.5_0011992g0040 Nicotiana tabacum HOM05D004617 ORTHO05D005531 6.8e-99 364.8 308 65.6
PGSC0003DMG400018106 Solanum tuberosum HOM05D004617 ORTHO05D005531 2.0e-98 363.2 306 66.3
Nitab4.5_0003918g0030 Nicotiana tabacum HOM05D004617 ORTHO05D005531 7.5e-98 361.3 303 66.3
CAN.G338.4 Capsicum annuum HOM05D004617 ORTHO05D005531 1.3e-97 360.5 307 65.5
Sopen03g031610 Solanum pennellii HOM05D004617 ORTHO05D005531 1.3e-97 360.5 309 66.3
Solyc03g112550.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 4.9e-97 358.6 309 65.7
Dinv38556 Davidia involucrata HOM05D004617 ORTHO05D005531 7.5e-90 334.7 311 59.8
Cc04_g12560 Coffea canephora HOM05D004617 ORTHO05D005531 5.4e-88 328.6 303 60.1
CSS0042906 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 6.6e-86 321.6 316 57.6
Dinv20620 Davidia involucrata HOM05D004617 ORTHO05D005531 6.6e-86 321.6 319 56.4
CSS0013084 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 8.6e-86 321.2 316 57.6
Rhsim12G0166500 Rhododendron simsii HOM05D004617 ORTHO05D005531 2.5e-85 319.7 345 51.9
Peaxi162Scf00089g01634 Petunia axillaris HOM05D004617 ORTHO05D005531 3.1e-83 312.8 314 58.6
vmacro16629 Vaccinium macrocarpon HOM05D004617 ORTHO05D005531 1.5e-82 310.5 337 52.2
TAR629G3522 Trochodendron aralioides HOM05D004617 ORTHO05D005531 2.9e-81 306.2 313 56.2
GSVIVG01007687001 Vitis vinifera HOM05D004617 ORTHO05D005531 9.6e-77 291.2 310 53.2
Oeu001681.1 Olea europaea HOM05D004617 ORTHO05D005531 2.6e-74 283.1 316 52.5
MSTRG.23154 Avicennia marina HOM05D004617 ORTHO05D005531 5.8e-74 282.0 314 51.9
MSTRG.11480 Avicennia marina HOM05D004617 ORTHO05D005531 1.6e-71 273.9 306 52.6
Migut.O00131 Erythranthe guttata HOM05D004617 ORTHO05D005531 2.1e-71 273.5 307 52.1
Potri.015G080900 Populus trichocarpa HOM05D004617 ORTHO05D005531 1.3e-70 270.8 310 51.0
ECA246G2887 Erigeron canadensis HOM05D004617 ORTHO05D005531 3.9e-70 269.2 319 48.3
DCAR_021575 Daucus carota HOM05D004617 ORTHO05D005531 1.1e-69 267.7 311 50.8
Lj9A445T80 Lonicera japonica HOM05D004617 ORTHO05D005531 3.3e-69 266.2 366 44.5
Haze_07552 Corylus avellana HOM05D004617 ORTHO05D005531 9.6e-69 264.6 336 50.0
HanXRQChr05g0154591 Helianthus annuus HOM05D004617 ORTHO05D005531 1.6e-68 263.8 310 48.7
Hma1.2p1_0046F.1_g026830 Hydrangea macrophylla HOM05D004617 ORTHO05D005531 3.6e-68 262.7 325 47.7
Hund09456 Selenicereus undatus HOM05D004617 ORTHO05D005531 1.4e-67 260.8 310 47.7
Lsat_1_v5_gn_5_15901 Lactuca sativa HOM05D004617 ORTHO05D005531 2.4e-67 260.0 312 50.0
Sc04g0001670 Simmondsia chinensis HOM05D004617 ORTHO05D005531 1.2e-66 257.7 306 47.4
TWI39G0523 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 2.0e-66 256.9 329 46.2
Potri.T124408 Populus trichocarpa HOM05D004617 ORTHO05D005531 2.2e-65 253.4 299 50.2
PSO478G3702 Papaver somniferum HOM05D004617 ORTHO05D005531 1.4e-64 250.8 301 48.2
RcHm_v2.0_Chr7g0193001 Rosa chinensis HOM05D004617 ORTHO05D005531 2.4e-64 250.0 311 47.9
PGR044G1277 Punica granatum HOM05D004617 ORTHO05D005531 5.4e-64 248.8 310 47.4
Atru.chr9.2539 Acer truncatum HOM05D004617 ORTHO05D005531 1.6e-63 247.3 338 47.3
Potri.012G088000 Populus trichocarpa HOM05D004617 ORTHO05D005531 1.6e-63 247.3 314 48.1
Sed0022669 Sechium edule HOM05D004617 ORTHO05D005531 1.6e-63 247.3 311 48.6
MD06G1170100 Malus domestica HOM05D004617 ORTHO05D005531 3.5e-63 246.1 317 46.7
CiPaw.12G028900 Carya illinoinensis HOM05D004617 ORTHO05D005531 4.6e-63 245.7 306 47.7
MD14G1175700 Malus domestica HOM05D004617 ORTHO05D005531 7.9e-63 245.0 310 48.4
Manes.06G108000 Manihot esculenta HOM05D004617 ORTHO05D005531 7.9e-63 245.0 306 46.7
QL10p008526 Quercus lobata HOM05D004617 ORTHO05D005531 1.3e-62 244.2 314 48.4
Sc12g0005180 Simmondsia chinensis HOM05D004617 ORTHO05D005531 2.3e-62 243.4 337 43.9
Nn4g22667 Nelumbo nucifera HOM05D004617 ORTHO05D005531 5.1e-62 242.3 281 50.5
QL10p008663 Quercus lobata HOM05D004617 ORTHO05D005531 5.1e-62 242.3 313 48.2
CsaV3_1G001290 Cucumis sativus L. HOM05D004617 ORTHO05D005531 6.7e-62 241.9 311 46.3
Lalb_Chr23g0273321 Lupinus albus HOM05D004617 ORTHO05D005531 1.1e-61 241.1 295 46.8
MELO3C026277.2 Cucumis melo HOM05D004617 ORTHO05D005531 1.9e-61 240.4 314 46.2
PSO017G2275 Papaver somniferum HOM05D004617 ORTHO05D005531 1.9e-61 240.4 301 46.8
COL.COLO4_30121 Corchorus olitorius HOM05D004617 ORTHO05D005531 2.5e-61 240.0 263 54.0
Ciclev10020950m.g Citrus clementina HOM05D004617 ORTHO05D005531 4.3e-61 239.2 341 44.3
Aqoxy3G01097 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 7.4e-61 238.4 308 46.1
SGA_v2.0_scaffold90G27877 Striga asiatica HOM05D004617 ORTHO05D005531 1.6e-60 237.3 318 46.2
Duzib205G1820 Durio zibethinus HOM05D004617 ORTHO05D005531 8.1e-60 235.0 266 53.4
Thecc.03G024100 Theobroma cacao HOM05D004617 ORTHO05D005531 8.1e-60 235.0 333 46.8
CiPaw.11G022700 Carya illinoinensis HOM05D004617 ORTHO05D005531 3.1e-59 233.0 306 47.7
Glyma.05G040000 Glycine max HOM05D004617 ORTHO05D005531 3.1e-59 233.0 302 46.4
Actinidia19118 Actinidia chinensis HOM05D004617 ORTHO05D005531 5.3e-59 232.3 234 55.1
Lj4g0013782 Lotus japonicus HOM05D004617 ORTHO05D005531 6.9e-59 231.9 309 43.4
Cpa.g.sc153.19 Carica papaya HOM05D004617 ORTHO05D005531 2.0e-58 230.3 301 45.8
FAN05G0977 Fragaria x ananassa HOM05D004617 ORTHO05D005531 3.4e-58 229.6 311 42.8
ClCG06G017200 Citrullus lanatus HOM05D004617 ORTHO05D005531 7.6e-58 228.4 314 45.5
AUR62029851 Chenopodium quinoa HOM05D004617 ORTHO05D005531 9.9e-58 228.0 310 46.1
TWI23G0363 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 1.3e-57 227.6 321 43.9
CANSAT80G0933 Cannabis sativa HOM05D004617 ORTHO05D005531 3.8e-57 226.1 310 46.1
THA.LOC104818211 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 3.8e-57 226.1 322 42.5
FvH4_6g24101 Fragaria vesca HOM05D004617 ORTHO05D005531 4.9e-57 225.7 311 42.1
arahy.Tifrunner.gnm1.ann1.B97T9I Arachis hypogaea HOM05D004617 ORTHO05D005531 1.4e-56 224.2 301 44.5
Lj5A127T55 Lonicera japonica HOM05D004617 ORTHO05D005531 2.4e-56 223.4 244 53.3
EL10Ac5g10692 Beta vulgaris HOM05D004617 ORTHO05D005531 5.5e-56 222.2 231 51.1
Gohir.A12G272900 Gossypium hirsutum HOM05D004617 ORTHO05D005531 1.6e-55 220.7 311 45.7
Gorai.008G294000 Gossypium raimondii HOM05D004617 ORTHO05D005531 3.5e-55 219.5 311 45.7
Phvul.009G175700 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 6.0e-55 218.8 300 42.0
arahy.Tifrunner.gnm1.ann1.P4R84V Arachis hypogaea HOM05D004617 ORTHO05D005531 7.9e-55 218.4 297 43.4
Gohir.D12G273600 Gossypium hirsutum HOM05D004617 ORTHO05D005531 1.0e-54 218.0 311 45.3
Eucgr.K02817 Eucalyptus grandis HOM05D004617 ORTHO05D005531 1.3e-54 217.6 332 43.4
Sabra12G0062800 Salix brachista HOM05D004617 ORTHO05D005531 3.0e-54 216.5 358 41.9
FvH4_5g05820 Fragaria vesca HOM05D004617 ORTHO05D005531 6.7e-54 215.3 309 41.1
SalBow5G0770 Salvia bowleyana HOM05D004617 ORTHO05D005531 1.1e-53 214.5 238 51.7
Phvul.003G203200 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 1.5e-53 214.2 296 43.6
SalBow5G2990 Salvia bowleyana HOM05D004617 ORTHO05D005531 3.3e-53 213.0 237 51.5
FAN18G1615 Fragaria x ananassa HOM05D004617 ORTHO05D005531 7.4e-53 211.8 234 45.7
Prupe.5G169600 Prunus persica HOM05D004617 ORTHO05D005531 9.6e-53 211.5 310 44.2
Ca_21946_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 2.1e-52 210.3 319 42.0
FAN08G0972 Fragaria x ananassa HOM05D004617 ORTHO05D005531 2.1e-52 210.3 304 42.1
THA.LOC104798968 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 2.1e-52 210.3 279 44.8
MBI16_g23858_MAGBIO Magnolia biondii HOM05D004617 ORTHO05D005531 4.8e-52 209.1 320 43.1
VMungo1215G2409 Vigna mungo HOM05D004617 ORTHO05D005531 4.8e-52 209.1 296 41.9
FAN13G0632 Fragaria x ananassa HOM05D004617 ORTHO05D005531 8.2e-52 208.4 230 46.1
Carub.0005s1437 Capsella rubella HOM05D004617 ORTHO05D005531 1.1e-51 208.0 312 42.9
Gohir.A09G172500 Gossypium hirsutum HOM05D004617 ORTHO05D005531 1.1e-51 208.0 268 47.8
Sabra15G0104900 Salix brachista HOM05D004617 ORTHO05D005531 2.4e-51 206.8 352 40.1
AUR62028750 Chenopodium quinoa HOM05D004617 ORTHO05D005531 3.1e-51 206.5 265 44.9
CARHR156970 Cardamine hirsuta HOM05D004617 ORTHO05D005531 1.5e-50 204.1 312 41.7
TPR.G37539 Trifolium pratense HOM05D004617 ORTHO05D005531 2.6e-50 203.4 294 43.2
Aa31LG4G16830 Aethionema arabicum HOM05D004617 ORTHO05D005531 1.0e-49 201.4 312 39.1
Gorai.006G189800 Gossypium raimondii HOM05D004617 ORTHO05D005531 1.0e-49 201.4 270 47.0
AUR62008173 Chenopodium quinoa HOM05D004617 ORTHO05D005531 2.9e-49 199.9 261 44.1
Thhalv10010559m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 3.8e-49 199.5 317 39.7
AL5G27600 Arabidopsis lyrata HOM05D004617 ORTHO05D005531 4.9e-49 199.1 320 41.2
Sp5g13810 Schrenkiella parvula HOM05D004617 ORTHO05D005531 1.2e-47 194.5 312 39.7
AT3G48210 Arabidopsis thaliana HOM05D004617 ORTHO05D005531 6.0e-47 192.2 320 40.9
Ca_29672_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 6.0e-47 192.2 282 43.6
VMungo1309G0654 Vigna mungo HOM05D004617 ORTHO05D005531 1.8e-46 190.7 322 37.6
BcaC01g02324 Brassica carinata HOM05D004617 ORTHO05D005531 3.0e-46 189.9 312 38.5
C03p66610 Brassica napus HOM05D004617 ORTHO05D005531 3.9e-46 189.5 309 38.5
BolC3t18931H Brassica oleracea HOM05D004617 ORTHO05D005531 5.1e-46 189.1 309 38.5
Medtr4g105330 Medicago truncatula HOM05D004617 ORTHO05D005531 5.1e-46 189.1 318 39.9
TAR371G0263 Trochodendron aralioides HOM05D004617 ORTHO05D005531 8.7e-46 188.3 185 55.1
Psat4g059160 Pisum sativum HOM05D004617 ORTHO05D005531 9.7e-45 184.9 305 40.0
BcaB02g10666 Brassica carinata HOM05D004617 ORTHO05D005531 1.3e-44 184.5 312 38.8
DCAR_004467 Daucus carota HOM05D004617 ORTHO05D005531 2.2e-44 183.7 218 48.2
unitig_0.g2533 Utricularia gibba HOM05D004617 ORTHO05D005531 5.3e-43 179.1 238 45.8
Thhalv10010553m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 2.6e-42 176.8 313 36.7
BraA06t25690Z Brassica rapa HOM05D004617 ORTHO05D005531 5.9e-42 175.6 310 37.4
A06p27500 Brassica napus HOM05D004617 ORTHO05D005531 7.6e-42 175.3 310 37.1
ATR1152G034 Amborella trichopoda HOM05D004617 ORTHO05D005531 6.5e-41 172.2 268 39.2
HPP92_011588 Vanilla planifolia HOM05D004617 ORTHO05D005531 2.3e-38 163.7 307 37.5
Os05g0110700 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 8.2e-36 155.2 320 35.9
CDE05G2613 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 3.1e-35 153.3 285 37.9
Cpa.g.sc153.20 Carica papaya HOM05D004617 ORTHO05D005531 1.5e-34 151.0 195 46.2
Gohir.D09G168200 Gossypium hirsutum HOM05D004617 ORTHO05D005531 7.7e-34 148.7 270 40.0
Psat4g095560 Pisum sativum HOM05D004617 ORTHO05D005531 1.9e-32 144.1 310 34.5
CDE02G4133 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 9.4e-32 141.7 222 41.9
Os01g0973200 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 4.7e-31 139.4 306 33.3
SEGI_25965 Sequoiadendron giganteum HOM05D004617 ORTHO05D005531 3.3e-29 133.3 218 35.3
FAN02G3554 Fragaria x ananassa HOM05D004617 ORTHO05D005531 4.4e-29 132.9 133 47.4
Zm00001eb139780 Zea mays HOM05D004617 ORTHO05D005531 4.4e-29 132.9 234 35.5
Zm00001eb362200 Zea mays HOM05D004617 ORTHO05D005531 1.9e-24 117.5 286 31.1
Glyma.04G186200 Glycine max HOM05D004617 ORTHO05D005531 4.7e-23 112.8 145 40.0
Zm00001eb355840 Zea mays HOM05D004617 ORTHO05D005531 3.7e-20 103.2 206 34.5
arahy.Tifrunner.gnm1.ann1.H09BLY Arachis hypogaea HOM05D004617 ORTHO05D005531 6.3e-20 102.4 152 40.8
Glyma.06G179933 Glycine max HOM05D004617 ORTHO05D005531 4.1e-19 99.8 148 37.2
BcaC07g39309 Brassica carinata HOM05D004617 ORTHO05D005531 3.5e-18 96.7 189 38.6
Aqoxy5G01948 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 6.5e-17 92.4 149 36.9
Pp3c8_1270 Physcomitrium patens HOM05D004617 ORTHO05D005531 5.5e-16 89.4 170 32.4
Mapoly0029s0121 Marchantia polymorpha HOM05D004617 ORTHO05D005531 3.6e-15 86.7 182 32.4
A06p19470 Brassica napus HOM05D004617 ORTHO05D005531 4.7e-15 86.3 251 32.7
Pp3c3_37370 Physcomitrium patens HOM05D004617 ORTHO05D005531 4.7e-15 86.3 192 31.8
BraA06t25026Z Brassica rapa HOM05D004617 ORTHO05D005531 3.0e-14 83.6 243 32.9
vmacro20892 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 4.0e-14 83.2 75 57.3
SMO200G0114 Selaginella moellendorffii HOM05D004617 ORTHO05D005531 7.5e-13 79.0 126 34.1
C08p23230 Brassica napus HOM05D004617 ORTHO05D005531 1.7e-12 77.8 191 31.4
Atru.chr9.2524 Acer truncatum HOM05D004617 ORTHO05D005531 2.4e-11 73.9 96 49.0
Glyma.17G086900 Glycine max HOM05D004617 ORTHO05D005531 5.0e-09 66.2 66 51.5
PRCOL_00005442 Prasinoderma coloniale HOM05D004617 ORTHO05D005531 4.2e-08 63.2 113 33.6
arahy.Tifrunner.gnm1.ann1.8UC028 Arachis hypogaea HOM05D004617 ORTHO05D005531 5.5e-08 62.8 99 41.4


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