Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g027660 Solanum pennellii HOM05D007596 ORTHO05D009672 1.4e-150 536.2 261 100.0
Solyc06g071380.3 Solanum lycopersicum HOM05D007596 ORTHO05D009672 4.6e-149 531.2 261 98.5
PGSC0003DMG400027097 Solanum tuberosum HOM05D007596 ORTHO05D009672 1.9e-147 525.8 261 96.6
Nitab4.5_0000003g0490 Nicotiana tabacum HOM05D007596 ORTHO05D009672 4.9e-143 511.1 261 93.1
Nitab4.5_0007803g0020 Nicotiana tabacum HOM05D007596 ORTHO05D009672 1.4e-142 509.6 261 93.5
Peaxi162Scf00689g00036 Petunia axillaris HOM05D007596 ORTHO05D009672 1.2e-122 443.4 261 83.9
Lj9A451T97 Lonicera japonica HOM05D007596 ORTHO05D009672 1.8e-113 412.9 264 73.9
EL10Ac5g10784 Beta vulgaris HOM05D007596 ORTHO05D009672 1.3e-108 396.7 264 72.0
ECA232G2922 Erigeron canadensis HOM05D007596 ORTHO05D009672 1.3e-108 396.7 261 70.9
Oeu041561.1 Olea europaea HOM05D007596 ORTHO05D009672 1.3e-108 396.7 264 70.8
Cc04_g12800 Coffea canephora HOM05D007596 ORTHO05D009672 3.9e-108 395.2 264 72.3
GSVIVG01007788001 Vitis vinifera HOM05D007596 ORTHO05D009672 5.1e-108 394.8 263 71.1
HanXRQChr16g0503661 Helianthus annuus HOM05D007596 ORTHO05D009672 1.5e-107 393.3 257 70.0
SGA_v2.0_scaffold90G27960 Striga asiatica HOM05D007596 ORTHO05D009672 9.6e-107 390.6 256 70.3
MSTRG.11436 Avicennia marina HOM05D007596 ORTHO05D009672 1.3e-106 390.2 256 70.7
Migut.I00032 Erythranthe guttata HOM05D007596 ORTHO05D009672 2.1e-106 389.4 266 72.2
Rhsim12G0163300 Rhododendron simsii HOM05D007596 ORTHO05D009672 1.1e-105 387.1 264 68.2
CiPaw.11G029100 Carya illinoinensis HOM05D007596 ORTHO05D009672 1.4e-105 386.7 253 70.8
Eucgr.K02859 Eucalyptus grandis HOM05D007596 ORTHO05D009672 1.4e-105 386.7 267 68.9
Aqoxy3G00967 Aquilegia oxysepala HOM05D007596 ORTHO05D009672 4.0e-105 385.2 256 70.3
Hund02735 Selenicereus undatus HOM05D007596 ORTHO05D009672 9.0e-105 384.0 261 71.3
CSS0015692 Camellia sinensis var. sinensis HOM05D007596 ORTHO05D009672 4.5e-104 381.7 253 70.0
DCAR_026124 Daucus carota HOM05D007596 ORTHO05D009672 7.6e-104 380.9 257 69.6
SalBow5G3112 Salvia bowleyana HOM05D007596 ORTHO05D009672 1.3e-103 380.2 258 69.4
Potri.012G078600 Populus trichocarpa HOM05D007596 ORTHO05D009672 2.9e-103 379.0 263 67.3
PSO063G6591 Papaver somniferum HOM05D007596 ORTHO05D009672 3.8e-103 378.6 253 70.0
Hma1.2p1_0701F.1_g205970 Hydrangea macrophylla HOM05D007596 ORTHO05D009672 6.4e-103 377.9 257 71.6
TAR374G1438 Trochodendron aralioides HOM05D007596 ORTHO05D009672 6.4e-103 377.9 264 68.9
vmacro16599 Vaccinium macrocarpon HOM05D007596 ORTHO05D009672 1.4e-102 376.7 264 67.8
CANSAT80G2510 Cannabis sativa HOM05D007596 ORTHO05D009672 4.2e-102 375.2 262 67.6
Nn4g22825 Nelumbo nucifera HOM05D007596 ORTHO05D009672 4.2e-102 375.2 253 70.8
TWI15G1048 Tripterygium wilfordii HOM05D007596 ORTHO05D009672 6.0e-101 371.3 262 67.9
MBI15_g31109_MAGBIO Magnolia biondii HOM05D007596 ORTHO05D009672 3.3e-99 365.5 257 68.1
Ciclev10021737m.g Citrus clementina HOM05D007596 ORTHO05D009672 4.3e-99 365.2 261 66.3
Thecc.03G008700 Theobroma cacao HOM05D007596 ORTHO05D009672 5.6e-99 364.8 262 65.6
Duzib205G0154 Durio zibethinus HOM05D007596 ORTHO05D009672 1.6e-98 363.2 262 65.6
Manes.06G103100 Manihot esculenta HOM05D007596 ORTHO05D009672 3.7e-98 362.1 263 66.2
Atru.chr9.2439 Acer truncatum HOM05D007596 ORTHO05D009672 1.4e-97 360.1 253 66.0
Psat4g056920 Pisum sativum HOM05D007596 ORTHO05D009672 1.8e-97 359.8 265 66.0
PGR044G0668 Punica granatum HOM05D007596 ORTHO05D009672 1.8e-97 359.8 265 66.8
Dinv20674 Davidia involucrata HOM05D007596 ORTHO05D009672 1.5e-96 356.7 220 75.9
Sabra12G0056400 Salix brachista HOM05D007596 ORTHO05D009672 2.0e-96 356.3 296 58.1
Gohir.A09G169500 Gossypium hirsutum HOM05D007596 ORTHO05D009672 3.4e-96 355.5 262 66.4
Gorai.006G187000 Gossypium raimondii HOM05D007596 ORTHO05D009672 1.0e-95 354.0 262 66.0
Phvul.003G198900 Phaseolus vulgaris HOM05D007596 ORTHO05D009672 1.0e-95 354.0 263 64.6
CsaV3_1G008350 Cucumis sativus L. HOM05D007596 ORTHO05D009672 2.2e-95 352.8 262 64.1
ClCG01G013000 Citrullus lanatus HOM05D007596 ORTHO05D009672 3.8e-95 352.1 253 63.6
Sed0010804 Sechium edule HOM05D007596 ORTHO05D009672 3.8e-95 352.1 253 66.0
FAN18G0106 Fragaria x ananassa HOM05D007596 ORTHO05D009672 6.5e-95 351.3 254 67.3
Glyma.05G036200 Glycine max HOM05D007596 ORTHO05D009672 6.5e-95 351.3 263 63.9
Lj4g0018893 Lotus japonicus HOM05D007596 ORTHO05D009672 6.5e-95 351.3 254 65.4
FvH4_5g05110 Fragaria vesca HOM05D007596 ORTHO05D009672 8.4e-95 350.9 254 66.9
Lalb_Chr13g0297881 Lupinus albus HOM05D007596 ORTHO05D009672 8.4e-95 350.9 255 66.7
FAN13G0067 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.4e-94 350.1 254 66.9
Medtr4g106630 Medicago truncatula HOM05D007596 ORTHO05D009672 5.5e-94 348.2 254 65.4
MD06G1177600 Malus domestica HOM05D007596 ORTHO05D009672 1.2e-93 347.1 253 65.2
FAN08G2413 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.6e-93 346.7 253 66.4
RcHm_v2.0_Chr7g0193891 Rosa chinensis HOM05D007596 ORTHO05D009672 3.5e-93 345.5 260 64.2
arahy.Tifrunner.gnm1.ann1.3E9X4W Arachis hypogaea HOM05D007596 ORTHO05D009672 6.7e-92 341.3 254 64.6
arahy.Tifrunner.gnm1.ann1.8F9XT7 Arachis hypogaea HOM05D007596 ORTHO05D009672 1.9e-91 339.7 254 64.2
HPP92_019181 Vanilla planifolia HOM05D007596 ORTHO05D009672 4.3e-91 338.6 264 63.6
Lsat_1_v5_gn_4_73100 Lactuca sativa HOM05D007596 ORTHO05D009672 2.1e-90 336.3 253 61.7
PSO832G1789 Papaver somniferum HOM05D007596 ORTHO05D009672 6.3e-90 334.7 225 69.3
FAN18G0038 Fragaria x ananassa HOM05D007596 ORTHO05D009672 3.4e-88 328.9 246 65.4
TPR.G37562 Trifolium pratense HOM05D007596 ORTHO05D009672 3.8e-87 325.5 255 62.0
COL.COLO4_34057 Corchorus olitorius HOM05D007596 ORTHO05D009672 2.5e-86 322.8 265 60.8
Psat4g101560 Pisum sativum HOM05D007596 ORTHO05D009672 3.0e-84 315.8 255 62.0
Cfa019092 Carpinus fangiana HOM05D007596 ORTHO05D009672 3.1e-81 305.8 210 70.5
ATR0691G114 Amborella trichopoda HOM05D007596 ORTHO05D009672 8.5e-79 297.7 220 61.8
VMungo1215G2651 Vigna mungo HOM05D007596 ORTHO05D009672 2.1e-77 293.1 263 55.9
Gohir.D09G165200 Gossypium hirsutum HOM05D007596 ORTHO05D009672 7.9e-77 291.2 262 57.6
Zm00001eb080350 Zea mays HOM05D007596 ORTHO05D009672 2.5e-70 269.6 224 57.6
Sc04g0001910 Simmondsia chinensis HOM05D007596 ORTHO05D009672 1.6e-69 266.9 179 70.9
Os04g0465800 Oryza sativa ssp. japonica HOM05D007596 ORTHO05D009672 3.6e-69 265.8 228 57.5
Prupe.5G176300 Prunus persica HOM05D007596 ORTHO05D009672 8.8e-68 261.2 178 69.7
Ca_21906_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 2.2e-63 246.5 207 59.4
Ca_21924_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 2.2e-63 246.5 207 59.4
SMO347G0014 Selaginella moellendorffii HOM05D007596 ORTHO05D009672 7.5e-59 231.5 179 57.5
SGA_v2.0_scaffold90G27962 Striga asiatica HOM05D007596 ORTHO05D009672 4.7e-53 212.2 161 62.1
unitig_26.g8797 Utricularia gibba HOM05D007596 ORTHO05D009672 3.0e-52 209.5 282 44.0
QL10p012241 Quercus lobata HOM05D007596 ORTHO05D009672 5.2e-52 208.8 132 70.5
Ah.13g077910 Amaranthus hybridus HOM05D007596 ORTHO05D004562 8.8e-52 208.0 181 58.0
CiPaw.11G029000 Carya illinoinensis HOM05D007596 ORTHO05D009672 1.8e-44 183.7 121 71.9
Haze_07490 Corylus avellana HOM05D007596 ORTHO05D009672 3.4e-43 179.5 131 64.9
Glyma.17G091200 Glycine max HOM05D007596 ORTHO05D009672 4.4e-43 179.1 192 48.4
CBR_g18641 Chara braunii HOM05D007596 ORTHO05D009672 1.9e-38 163.7 151 53.6
AUR62030990 Chenopodium quinoa HOM05D007596 ORTHO05D009672 7.5e-35 151.8 100 71.0
FAN04G0664 Fragaria x ananassa HOM05D007596 ORTHO05D009672 8.6e-31 138.3 118 55.9
COL.COLO4_33480 Corchorus olitorius HOM05D007596 ORTHO05D009672 7.3e-30 135.2 106 58.5
FvH4_5g16630 Fragaria vesca HOM05D007596 ORTHO05D009672 1.2e-27 127.9 315 30.8
FAN18G2080 Fragaria x ananassa HOM05D007596 ORTHO05D009672 3.4e-27 126.3 315 30.8
Cpa.g.c40406 Carica papaya HOM05D007596 ORTHO05D009672 6.0e-24 115.5 97 58.8
SGA_v2.0_scaffold90G27974 Striga asiatica HOM05D001155 ORTHO05D001080 3.9e-23 112.8 92 57.6
Sc11g0005570 Simmondsia chinensis HOM05D007596 ORTHO05D009672 6.2e-21 105.5 58 77.6
Sc11g0005890 Simmondsia chinensis HOM05D007596 ORTHO05D009672 1.4e-20 104.4 58 75.9
SGA_v2.0_scaffold90G27967 Striga asiatica HOM05D007596 ORTHO05D009672 2.5e-14 83.6 75 53.3
EL10Ac4g09605 Beta vulgaris HOM05D004918 ORTHO05D005706 4.7e-13 79.3 113 39.8


User provided reference genes

Program Settings