Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g027480 Solanum pennellii HOM05D006327 ORTHO05D007952 1.7e-153 546.2 327 100.0
Solyc06g071170.4 Solanum lycopersicum HOM05D006327 ORTHO05D007952 2.7e-151 538.9 327 98.8
PGSC0003DMG400033064 Solanum tuberosum HOM05D006327 ORTHO05D007952 2.8e-140 502.3 327 93.6
Nitab4.5_0000003g0110 Nicotiana tabacum HOM05D006327 ORTHO05D007952 2.3e-113 412.9 333 72.7
Nitab4.5_0000758g0030 Nicotiana tabacum HOM05D006327 ORTHO05D007952 2.1e-111 406.4 333 70.9
Peaxi162Scf00689g00562 Petunia axillaris HOM05D006327 ORTHO05D007952 2.0e-101 373.2 357 62.5
Cfa019028 Carpinus fangiana HOM05D006327 ORTHO05D007952 1.4e-67 260.8 348 48.3
Haze_07403 Corylus avellana HOM05D006327 ORTHO05D007952 2.3e-65 253.4 360 50.0
Duzib205G1023 Durio zibethinus HOM05D006327 ORTHO05D007952 3.9e-65 252.7 350 50.3
Actinidia34971 Actinidia chinensis HOM05D006327 ORTHO05D007952 1.1e-64 251.1 371 51.5
Gohir.D13G092100 Gossypium hirsutum HOM05D006327 ORTHO05D007952 2.5e-64 250.0 337 49.6
Gohir.A13G087700 Gossypium hirsutum HOM05D006327 ORTHO05D007952 9.6e-64 248.1 339 49.6
CSS0041426 Camellia sinensis var. sinensis HOM05D006327 ORTHO05D007952 1.3e-63 247.7 364 46.2
Gorai.010G139000 Gossypium raimondii HOM05D006327 ORTHO05D007952 1.6e-63 247.3 337 49.3
Thecc.K0000500 Theobroma cacao HOM05D006327 ORTHO05D007952 2.4e-62 243.4 338 47.6
Ciclev10020740m.g Citrus clementina HOM05D006327 ORTHO05D007952 1.2e-61 241.1 356 45.5
Manes.14G072700 Manihot esculenta HOM05D006327 ORTHO05D007952 1.2e-61 241.1 362 50.0
Lj9A456G27 Lonicera japonica HOM05D006327 ORTHO05D007952 2.6e-61 240.0 362 45.6
MD06G1184600 Malus domestica HOM05D006327 ORTHO05D007952 2.6e-61 240.0 361 46.5
RcHm_v2.0_Chr7g0180141 Rosa chinensis HOM05D006327 ORTHO05D007952 4.5e-61 239.2 349 46.1
DCAR_021548 Daucus carota HOM05D006327 ORTHO05D007952 7.6e-61 238.4 331 46.8
FAN13G1795 Fragaria x ananassa HOM05D006327 ORTHO05D007952 1.7e-60 237.3 356 46.9
GSVIVG01008091001 Vitis vinifera HOM05D006327 ORTHO05D007952 5.0e-60 235.7 363 47.7
Hma1.2p1_0572F.1_g181140 Hydrangea macrophylla HOM05D006327 ORTHO05D007952 6.5e-60 235.3 353 54.1
FAN04G1419 Fragaria x ananassa HOM05D006327 ORTHO05D007952 1.1e-59 234.6 352 47.2
Potri.012G072600 Populus trichocarpa HOM05D006327 ORTHO05D007952 4.2e-59 232.6 351 51.3
Prupe.5G183400 Prunus persica HOM05D006327 ORTHO05D007952 4.2e-59 232.6 362 46.4
FAN08G2893 Fragaria x ananassa HOM05D006327 ORTHO05D007952 5.5e-59 232.3 351 46.7
QL10p014464 Quercus lobata HOM05D006327 ORTHO05D007952 7.1e-59 231.9 357 46.8
Hund09383 Selenicereus undatus HOM05D006327 ORTHO05D007952 7.1e-59 231.9 349 46.4
vmacro16576 Vaccinium macrocarpon HOM05D006327 ORTHO05D007952 1.2e-58 231.1 361 51.8
FvH4_5g15910 Fragaria vesca HOM05D006327 ORTHO05D007952 1.6e-58 230.7 355 45.9
Migut.I00102 Erythranthe guttata HOM05D006327 ORTHO05D007952 6.1e-58 228.8 349 45.3
TPR.G11929 Trifolium pratense HOM05D006327 ORTHO05D007952 6.1e-58 228.8 342 50.3
DCAR_016525 Daucus carota HOM05D006327 ORTHO05D007952 1.8e-57 227.3 329 45.9
Eucgr.B00389 Eucalyptus grandis HOM05D006327 ORTHO05D007952 1.8e-57 227.3 355 45.9
TAR629G2492 Trochodendron aralioides HOM05D006327 ORTHO05D007952 3.9e-57 226.1 379 43.0
Lalb_Chr11g0071521 Lupinus albus HOM05D006327 ORTHO05D007952 5.1e-57 225.7 336 46.7
VMungo1309G2881 Vigna mungo HOM05D006327 ORTHO05D007952 5.1e-57 225.7 346 45.7
Phvul.009G183700 Phaseolus vulgaris HOM05D006327 ORTHO05D007952 8.7e-57 224.9 334 47.0
EL10Ac5g10880 Beta vulgaris HOM05D006327 ORTHO05D007952 2.5e-56 223.4 357 44.5
FAN18G0307 Fragaria x ananassa HOM05D006327 ORTHO05D007952 5.7e-56 222.2 352 45.5
Glyma.06G188300 Glycine max HOM05D006327 ORTHO05D007952 9.7e-56 221.5 346 45.1
AUR62008321 Chenopodium quinoa HOM05D006327 ORTHO05D007952 1.3e-55 221.1 332 47.0
Medtr0168s0110 Medicago truncatula HOM05D006327 ORTHO05D007952 1.3e-55 221.1 352 47.2
ClCG06G016530 Citrullus lanatus HOM05D006327 ORTHO05D007952 1.6e-55 220.7 358 47.2
CsaV3_1G001980 Cucumis sativus L. HOM05D006327 ORTHO05D007952 1.8e-54 217.2 359 43.5
HanXRQChr02g0045371 Helianthus annuus HOM05D006327 ORTHO05D007952 1.5e-53 214.2 339 44.5
Lj1g0017631 Lotus japonicus HOM05D006327 ORTHO05D007952 1.5e-53 214.2 339 48.4
Nn4g22987 Nelumbo nucifera HOM05D006327 ORTHO05D007952 2.0e-53 213.8 394 40.6
COL.COLO4_21256 Corchorus olitorius HOM05D006327 ORTHO05D007952 2.6e-53 213.4 368 42.1
MD14G1190500 Malus domestica HOM05D006327 ORTHO05D007952 3.4e-53 213.0 365 44.1
Sed0003639 Sechium edule HOM05D006327 ORTHO05D007952 3.4e-53 213.0 347 47.3
Glyma.04G176800 Glycine max HOM05D006327 ORTHO05D007952 1.7e-52 210.7 335 49.0
Cc04_g16010 Coffea canephora HOM05D006327 ORTHO05D007952 2.2e-52 210.3 390 47.2
arahy.Tifrunner.gnm1.ann1.RDR8CP Arachis hypogaea HOM05D006327 ORTHO05D007952 2.9e-52 209.9 351 44.2
arahy.Tifrunner.gnm1.ann1.Y9A7HY Arachis hypogaea HOM05D006327 ORTHO05D007952 1.4e-51 207.6 356 44.7
SGA_v2.0_scaffold56G20076 Striga asiatica HOM05D006327 ORTHO05D007952 1.6e-50 204.1 368 42.1
Ah.02g112960 Amaranthus hybridus HOM05D006327 ORTHO05D007952 3.6e-50 203.0 339 43.4
TWI81G1080 Tripterygium wilfordii HOM05D006327 ORTHO05D007952 3.6e-50 203.0 332 43.1
AUR62021775 Chenopodium quinoa HOM05D006327 ORTHO05D007952 7.9e-50 201.8 334 42.2
MELO3C017142.2 Cucumis melo HOM05D006327 ORTHO05D007952 2.5e-48 196.8 420 40.7
PGR083G2875 Punica granatum HOM05D006327 ORTHO05D007952 1.4e-46 191.0 286 45.8
Lsat_1_v5_gn_5_17580 Lactuca sativa HOM05D006327 ORTHO05D007952 2.4e-46 190.3 368 40.2
Rhsim12G0160300 Rhododendron simsii HOM05D006327 ORTHO05D007952 2.6e-45 186.8 301 44.2
Sabra12G0051800 Salix brachista HOM05D006327 ORTHO05D007952 7.7e-45 185.3 282 44.7
ECA247G1897 Erigeron canadensis HOM05D006327 ORTHO05D007881 1.4e-43 181.0 320 43.1
CANSAT80G2449 Cannabis sativa HOM05D006327 ORTHO05D007952 7.9e-42 175.3 458 40.8
Aqoxy3G03193 Aquilegia oxysepala HOM05D006327 ORTHO05D007952 1.8e-41 174.1 422 35.1
THA.LOC104818247 Tarenaya hassleriana HOM05D006327 ORTHO05D007952 4.4e-40 169.5 355 39.2
CiPaw.12G020800 Carya illinoinensis HOM05D006327 ORTHO05D007952 1.3e-39 167.9 313 41.2
Sp5g14110 Schrenkiella parvula HOM05D006327 ORTHO05D007952 2.4e-38 163.7 355 37.5
PSO832G2780 Papaver somniferum HOM05D006327 ORTHO05D007952 1.5e-37 161.0 402 34.3
AT3G47850 Arabidopsis thaliana HOM05D006327 ORTHO05D007952 2.6e-37 160.2 345 38.3
PSO591G0157 Papaver somniferum HOM05D006327 ORTHO05D007952 3.5e-37 159.8 405 35.1
AL5G27170 Arabidopsis lyrata HOM05D006327 ORTHO05D007952 7.7e-37 158.7 349 39.3
C03p72080 Brassica napus HOM05D006327 ORTHO05D007952 1.1e-35 154.8 351 38.7
BcaC01g01770 Brassica carinata HOM05D006327 ORTHO05D007952 2.5e-35 153.7 351 37.6
BolC3t19506H Brassica oleracea HOM05D006327 ORTHO05D007952 2.5e-35 153.7 351 37.6
Carub.0005s1399 Capsella rubella HOM05D006327 ORTHO05D007952 2.5e-35 153.7 349 37.8
BcaB01g00870 Brassica carinata HOM05D006327 ORTHO05D007952 3.2e-35 153.3 354 36.4
Zm00001eb053670 Zea mays HOM05D006327 ORTHO05D007952 8.0e-34 148.7 331 40.8
BolC1t03192H Brassica oleracea HOM05D006327 ORTHO05D007952 2.3e-33 147.1 341 37.0
Psat5g181760 Pisum sativum HOM05D006327 ORTHO05D007952 3.0e-33 146.7 277 40.4
Hund02693 Selenicereus undatus HOM05D006327 ORTHO05D007952 4.0e-33 146.4 323 37.8
A06p19780 Brassica napus HOM05D006327 ORTHO05D007952 5.2e-33 146.0 355 34.9
BraA06t25057Z Brassica rapa HOM05D006327 ORTHO05D007952 5.2e-33 146.0 355 34.9
Sed0027580 Sechium edule HOM05D006327 ORTHO05D007952 3.3e-32 143.3 281 39.1
CDE06G0071 Ceratophyllum demersum HOM05D006327 ORTHO05D007952 1.7e-31 141.0 356 35.1
Atru.chr9.2360 Acer truncatum HOM05D006327 ORTHO05D007952 2.2e-31 140.6 164 53.7
CARHR156550 Cardamine hirsuta HOM05D006327 ORTHO05D007952 8.2e-31 138.7 345 35.7
Sc12g0005950 Simmondsia chinensis HOM05D006327 ORTHO05D007952 4.1e-30 136.3 399 32.1
SGA_v2.0_scaffold25G10883 Striga asiatica HOM05D006327 ORTHO05D007952 1.0e-28 131.7 348 33.0
Os05g0220900 Oryza sativa ssp. japonica HOM05D006327 ORTHO05D007952 2.2e-28 130.6 349 40.4
unitig_61.g26481 Utricularia gibba HOM05D006327 ORTHO05D007952 4.2e-27 126.3 355 34.6
Thhalv10010485m.g Eutrema salsugineum HOM05D006327 ORTHO05D007952 1.2e-26 124.8 282 35.8
HPP92_015918 Vanilla planifolia HOM05D006327 ORTHO05D007952 8.0e-26 122.1 346 31.2
HPP92_015937 Vanilla planifolia HOM05D006327 ORTHO05D007952 4.0e-25 119.8 343 30.9
BcaB05g23082 Brassica carinata HOM05D006327 ORTHO05D007952 7.0e-22 109.0 187 44.9
Dinv19897 Davidia involucrata HOM05D006327 ORTHO05D007952 1.7e-20 104.4 329 32.5
CDE08G0244 Ceratophyllum demersum HOM05D006327 ORTHO05D007952 5.0e-20 102.8 190 43.7
Actinidia19065 Actinidia chinensis HOM05D006327 ORTHO05D007952 4.4e-16 89.7 306 33.0
Aa31LG4G16510 Aethionema arabicum HOM05D006327 ORTHO05D007952 5.7e-16 89.4 363 30.3
SEGI_36963 Sequoiadendron giganteum HOM05D006327 ORTHO05D007952 3.5e-13 80.1 297 29.0
Cpa.g.c28309.3 Carica papaya HOM05D006327 ORTHO05D007952 5.9e-13 79.3 58 62.1
ATR0665G137 Amborella trichopoda HOM05D006327 ORTHO05D007952 7.7e-13 79.0 133 40.6
Nn5g29700 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.3e-12 78.2 58 60.3
Sc12g0005960 Simmondsia chinensis HOM05D006327 ORTHO05D007952 1.7e-12 77.8 48 70.8
Nn5g29803 Nelumbo nucifera HOM05D006327 ORTHO05D007952 2.3e-12 77.4 49 67.3
Nn4g25043 Nelumbo nucifera HOM05D006327 ORTHO05D007952 3.8e-12 76.6 58 58.6
Nn5g29485 Nelumbo nucifera HOM05D006327 ORTHO05D007952 3.8e-12 76.6 58 58.6
MSTRG.11411 Avicennia marina HOM05D006327 ORTHO05D007952 5.0e-12 76.3 104 43.3
Nn6g34101 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.9e-11 74.3 58 58.6
Nn2g11504 Nelumbo nucifera HOM05D006327 ORTHO05D007952 3.3e-11 73.6 58 56.9
Nn2g11507 Nelumbo nucifera HOM05D006327 ORTHO05D007952 3.3e-11 73.6 58 56.9
Nn1g09464 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.6e-10 71.2 49 63.3
Nn1g07420 Nelumbo nucifera HOM05D006327 ORTHO05D007952 4.7e-10 69.7 58 55.2
ATR0665G641 Amborella trichopoda HOM05D006327 ORTHO05D007952 2.6e-08 63.9 58 48.3
Oeu035426.1 Olea europaea HOM05D006327 ORTHO05D007952 7.5e-08 62.4 49 57.1
SMO361G0693 Selaginella moellendorffii HOM05D006327 ORTHO05D007952 1.3e-07 61.6 205 28.3
Cpa.g.sc939.1 Carica papaya HOM05D006327 ORTHO05D007952 1.1e-06 58.5 58 60.3
Migut.B01064 Erythranthe guttata HOM05D006327 ORTHO05D007952 5.4e-06 56.2 43 60.5


User provided reference genes

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