Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g027000 Solanum pennellii HOM05D007763 ORTHO05D009537 2.7e-116 423.7 679 100.0
Solyc06g069700.4 Solanum lycopersicum HOM05D007763 ORTHO05D009537 9.2e-101 372.1 662 98.6
CAN.G587.9 Capsicum annuum HOM05D007763 ORTHO05D009537 9.9e-63 245.7 672 89.6
Nitab4.5_0003021g0070 Nicotiana tabacum HOM05D007763 ORTHO05D009537 1.4e-45 188.7 152 82.9
Peaxi162Scf00013g00410 Petunia axillaris HOM05D007763 ORTHO05D009537 7.9e-44 183.0 151 80.8
Nitab4.5_0004286g0010 Nicotiana tabacum HOM05D007763 ORTHO05D009537 1.8e-32 145.2 120 85.0
Migut.I00207 Erythranthe guttata HOM05D007763 ORTHO05D009537 1.1e-29 136.0 138 53.6
Dinv38739 Davidia involucrata HOM05D007763 ORTHO05D001128 9.4e-29 132.9 178 43.8
SGA_v2.0_scaffold25G10931 Striga asiatica HOM05D007763 ORTHO05D009537 9.4e-29 132.9 172 46.5
Hma1.2p1_0060F.1_g033520 Hydrangea macrophylla HOM05D007763 ORTHO05D009537 6.1e-28 130.2 157 49.7
HanXRQChr08g0236691 Helianthus annuus HOM05D007763 ORTHO05D009537 3.9e-27 127.5 140 50.0
Cc04_g15160 Coffea canephora HOM05D007763 ORTHO05D009537 7.4e-26 123.2 136 49.3
Lsat_1_v5_gn_5_21540 Lactuca sativa HOM05D007763 ORTHO05D009537 1.3e-25 122.5 131 51.9
Lj9C466T13 Lonicera japonica HOM05D007763 ORTHO05D009537 1.7e-25 122.1 165 47.3
MSTRG.11374 Avicennia marina HOM05D007763 ORTHO05D009537 1.4e-24 119.0 145 48.3
RcHm_v2.0_Chr7g0181881 Rosa chinensis HOM05D007763 ORTHO05D009537 1.8e-24 118.6 141 50.4
Thecc.03G093400 Theobroma cacao HOM05D007763 ORTHO05D009537 3.1e-24 117.9 160 45.0
Actinidia04871 Actinidia chinensis HOM05D007763 ORTHO05D009537 1.6e-23 115.5 152 43.4
Duzib205G0970 Durio zibethinus HOM05D007763 ORTHO05D009537 5.9e-23 113.6 145 44.8
Manes.14G081200 Manihot esculenta HOM05D007763 ORTHO05D009537 7.7e-23 113.2 163 42.9
Haze_07298 Corylus avellana HOM05D007763 ORTHO05D010304 1.7e-22 112.1 152 40.8
Sc12g0006490 Simmondsia chinensis HOM05D007763 ORTHO05D009537 6.5e-22 110.2 158 43.0
CSS0022156 Camellia sinensis var. sinensis HOM05D007763 ORTHO05D009537 8.5e-22 109.8 152 44.1
Rhsim08G0152400 Rhododendron simsii HOM05D000001 ORTHO05D010304 1.1e-21 109.4 129 46.5
AUR62021645 Chenopodium quinoa HOM05D007763 ORTHO05D009537 3.2e-21 107.8 124 46.0
FvH4_5g14610 Fragaria vesca HOM05D007763 ORTHO05D009537 3.2e-21 107.8 128 50.0
PGR031G2821 Punica granatum HOM05D007763 ORTHO05D009537 4.2e-21 107.5 150 46.0
TAR622G0770 Trochodendron aralioides HOM05D007763 ORTHO05D009537 5.5e-21 107.1 140 45.0
FAN13G0255 Fragaria x ananassa HOM05D007763 ORTHO05D009537 9.4e-21 106.3 127 48.8
FAN18G1924 Fragaria x ananassa HOM05D007763 ORTHO05D009537 9.4e-21 106.3 127 48.8
Gorai.003G098200 Gossypium raimondii HOM05D007763 ORTHO05D009537 1.2e-20 105.9 118 46.6
COL.COLO4_36930 Corchorus olitorius HOM05D007763 ORTHO05D009537 1.6e-20 105.5 142 43.7
Gohir.D03G094100 Gossypium hirsutum HOM05D007763 ORTHO05D009537 4.7e-20 104.0 118 45.8
Ciclev10024595m.g Citrus clementina HOM05D007763 ORTHO05D009537 6.1e-20 103.6 125 45.6
GSVIVG01007974001 Vitis vinifera HOM05D007763 ORTHO05D010304 1.0e-19 102.8 144 43.1
Atru.chr12.1670 Acer truncatum HOM05D007763 ORTHO05D009537 1.8e-19 102.1 124 46.0
Cfa018915 Carpinus fangiana HOM05D007763 ORTHO05D009537 1.8e-19 102.1 150 38.7
Gohir.A03G067600 Gossypium hirsutum HOM05D007763 ORTHO05D009537 1.8e-19 102.1 145 42.8
Prupe.5G197300 Prunus persica HOM05D007763 ORTHO05D009537 4.0e-19 100.9 121 45.5
Ah.02g113700 Amaranthus hybridus HOM05D007763 ORTHO05D009537 5.2e-19 100.5 125 44.0
TWI60G1313 Tripterygium wilfordii HOM05D007763 ORTHO05D009537 5.2e-19 100.5 151 43.7
Aqoxy3G00480 Aquilegia oxysepala HOM05D007763 ORTHO05D009537 6.7e-19 100.1 116 45.7
QL10p017571 Quercus lobata HOM05D007763 ORTHO05D009537 7.5e-18 96.7 124 42.7
Carub.0008s2207 Capsella rubella HOM05D007763 ORTHO05D009537 1.8e-16 92.0 165 38.8
PSO017G0499 Papaver somniferum HOM05D007763 ORTHO05D009537 2.4e-16 91.7 151 41.1
ClCG09G020450 Citrullus lanatus HOM05D007763 ORTHO05D009537 9.1e-16 89.7 127 41.7
Nn2g12476 Nelumbo nucifera HOM05D007763 ORTHO05D009537 2.7e-15 88.2 144 38.2
Sed0000161 Sechium edule HOM05D007763 ORTHO05D009537 2.7e-15 88.2 126 46.0
EL10Ac5g11053 Beta vulgaris HOM05D014602 ORTHO05D009537 5.9e-15 87.0 80 56.2
Oeu052450.2 Olea europaea HOM05D007763 ORTHO05D009537 1.3e-14 85.9 71 60.6
AL8G38070 Arabidopsis lyrata HOM05D007763 ORTHO05D009537 1.9e-13 82.0 146 39.0
Thhalv10005336m.g Eutrema salsugineum HOM05D007763 ORTHO05D009537 2.5e-13 81.6 149 39.6
MELO3C025502.2 Cucumis melo HOM05D007763 ORTHO05D009537 5.5e-13 80.5 173 33.5
THA.LOC104801471 Tarenaya hassleriana HOM05D007763 ORTHO05D009537 9.4e-13 79.7 118 44.1
CARHR275160 Cardamine hirsuta HOM05D007763 ORTHO05D009537 3.6e-12 77.8 134 38.8
AT5G61400 Arabidopsis thaliana HOM05D007763 ORTHO05D009537 6.1e-12 77.0 133 39.1
Phvul.009G185566 Phaseolus vulgaris HOM05D007763 ORTHO05D009537 6.1e-12 77.0 77 45.5
AUR62008445 Chenopodium quinoa HOM05D007763 ORTHO05D009537 8.0e-12 76.6 140 35.7
CsaV3_5G025970 Cucumis sativus L. HOM05D007763 ORTHO05D009537 2.3e-11 75.1 173 31.2
CDE04G3021 Ceratophyllum demersum HOM05D007763 ORTHO05D000003 3.0e-11 74.7 127 35.4
Atru.chr12.1664 Acer truncatum HOM05D007763 ORTHO05D009537 5.2e-11 73.9 72 48.6
BcaC04g23450 Brassica carinata HOM05D007763 ORTHO05D009537 5.2e-11 73.9 133 39.8
C09p08190 Brassica napus HOM05D007763 ORTHO05D009537 5.2e-11 73.9 133 39.8
BolC9t53731H Brassica oleracea HOM05D007763 ORTHO05D009537 5.2e-11 73.9 133 39.8
DCAR_002300 Daucus carota HOM05D007763 ORTHO05D009537 5.2e-11 73.9 77 49.4
BcaNung06902 Brassica carinata HOM05D007763 ORTHO05D009537 8.8e-11 73.2 134 39.6
TPR.G27557 Trifolium pratense HOM05D007763 ORTHO05D009537 1.2e-10 72.8 74 43.2
Aa31LG11G2020 Aethionema arabicum HOM05D007763 ORTHO05D009537 2.0e-10 72.0 103 40.8
arahy.Tifrunner.gnm1.ann1.NWYI6Z Arachis hypogaea HOM05D000001 ORTHO05D010304 7.5e-10 70.1 72 45.8
BraA09t36381Z Brassica rapa HOM05D007763 ORTHO05D009537 9.8e-10 69.7 134 39.6
arahy.Tifrunner.gnm1.ann1.PFL66H Arachis hypogaea HOM05D007763 ORTHO05D009537 3.7e-09 67.8 71 45.1
ECA246G2275 Erigeron canadensis HOM05D007763 ORTHO05D009537 3.7e-09 67.8 76 39.5
Atru.chr12.1659 Acer truncatum HOM05D007763 ORTHO05D009537 6.3e-09 67.0 74 47.3
Ca_14664_v3 Cicer arietinum L. HOM05D007763 ORTHO05D009537 1.4e-08 65.9 79 39.2
LjContig00102g0005353 Lotus japonicus HOM05D000001 ORTHO05D010304 2.0e-07 62.0 72 41.7
Lalb_Chr08g0235511 Lupinus albus HOM05D007763 ORTHO05D009537 2.0e-07 62.0 74 40.5
vmacro17568 Vaccinium macrocarpon HOM05D007763 ORTHO05D009537 5.9e-07 60.5 111 41.4
Medtr3g037490 Medicago truncatula HOM05D007763 ORTHO05D009537 1.3e-06 59.3 58 44.8
ATR1127G168 Amborella trichopoda HOM05D007763 ORTHO05D009537 1.7e-06 58.9 128 34.4


User provided reference genes

Program Settings