Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 1.3e-51 206.1 103 100.0
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 8.6e-51 203.4 101 100.0
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 8.3e-46 186.8 103 90.3
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 8.3e-46 186.8 103 90.3
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 2.4e-45 185.3 103 89.3
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 6.6e-43 177.2 103 83.5
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 5.6e-42 174.1 101 83.2
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 3.6e-41 171.4 102 82.4
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 2.3e-40 168.7 103 81.6
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 1.2e-39 166.4 101 82.2
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 2.2e-38 162.2 104 80.8
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 1.1e-37 159.8 97 81.4
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 2.4e-37 158.7 100 78.0
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 7.0e-37 157.1 100 79.0
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 7.0e-37 157.1 100 79.0
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 7.0e-37 157.1 100 79.0
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 9.2e-37 156.8 100 79.0
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 9.2e-37 156.8 99 78.8
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 9.2e-37 156.8 100 78.0
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 2.1e-36 155.6 97 79.4
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 2.7e-36 155.2 101 77.2
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 2.7e-36 155.2 101 77.2
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 2.7e-36 155.2 99 77.8
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 2.7e-36 155.2 101 77.2
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 2.7e-36 155.2 100 78.0
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 6.0e-36 154.1 99 77.8
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 6.0e-36 154.1 99 79.8
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 1.3e-35 152.9 99 75.8
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 1.3e-35 152.9 99 75.8
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 2.3e-35 152.1 100 77.0
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 3.9e-35 151.4 100 74.0
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 1.5e-34 149.4 100 73.0
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 1.9e-34 149.1 99 72.7
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 1.9e-34 149.1 96 79.2
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 2.5e-34 148.7 103 69.9
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 2.5e-34 148.7 101 71.3
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 2.5e-34 148.7 103 71.8
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 5.6e-34 147.5 92 80.4
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 9.5e-34 146.7 92 81.5
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 9.5e-34 146.7 100 74.0
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 9.5e-34 146.7 99 75.8
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 1.2e-33 146.4 99 72.7
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 1.2e-33 146.4 99 73.7
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 1.2e-33 146.4 99 73.7
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 1.2e-33 146.4 99 73.7
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 1.2e-33 146.4 97 74.2
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 1.2e-33 146.4 100 73.0
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 1.2e-33 146.4 88 80.7
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 1.6e-33 146.0 92 78.3
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 1.6e-33 146.0 99 72.7
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 2.1e-33 145.6 99 74.7
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 2.1e-33 145.6 92 78.3
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 2.8e-33 145.2 96 75.0
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 3.6e-33 144.8 99 73.7
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 6.2e-33 144.1 103 70.9
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 8.1e-33 143.7 94 76.6
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 8.1e-33 143.7 82 85.4
EL10Ac5g11112 Beta vulgaris HOM05D006748 ORTHO05D008553 1.1e-32 143.3 101 73.3
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 1.1e-32 143.3 99 73.7
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 1.1e-32 143.3 103 69.9
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 1.4e-32 142.9 100 72.0
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 1.4e-32 142.9 103 69.9
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 1.8e-32 142.5 103 68.9
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 1.8e-32 142.5 103 69.9
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 1.8e-32 142.5 103 69.9
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 3.1e-32 141.7 103 69.9
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 3.1e-32 141.7 103 69.9
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 3.1e-32 141.7 96 69.8
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 4.0e-32 141.4 92 75.0
SHI30118 Sapria himalayana HOM05D006748 ORTHO05D008553 4.0e-32 141.4 90 75.6
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 5.2e-32 141.0 103 70.9
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 6.8e-32 140.6 99 69.7
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 6.8e-32 140.6 91 73.6
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 8.9e-32 140.2 96 67.7
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 8.9e-32 140.2 98 69.4
FAN13G1579 Fragaria x ananassa HOM05D006748 ORTHO05D008553 1.2e-31 139.8 102 69.6
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 1.2e-31 139.8 103 68.9
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 1.5e-31 139.4 99 69.7
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 1.5e-31 139.4 98 67.3
FvH4_5g14060 Fragaria vesca HOM05D006748 ORTHO05D008553 2.0e-31 139.0 102 68.6
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 2.6e-31 138.7 89 75.3
FvH4_5g14160 Fragaria vesca HOM05D006748 ORTHO05D008553 3.4e-31 138.3 102 68.6
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 7.5e-31 137.1 99 69.7
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 1.3e-30 136.3 103 67.0
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 4.9e-30 134.4 101 67.3
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 4.9e-30 134.4 99 68.7
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 1.4e-29 132.9 100 66.0
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 4.1e-29 131.3 78 83.3
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 6.0e-28 127.5 99 65.7
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 1.9e-26 122.5 80 75.0
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 3.3e-26 121.7 80 77.5
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 5.6e-26 120.9 80 75.0
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 7.3e-26 120.6 80 73.8
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 7.3e-26 120.6 79 75.9
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 1.2e-25 119.8 81 74.1
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 2.8e-25 118.6 91 62.6
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 1.4e-24 116.3 131 51.1
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 1.2e-23 113.2 80 71.2
AUR62008510 Chenopodium quinoa HOM05D006748 ORTHO05D008553 1.2e-23 113.2 82 70.7
SMO201G0125 Selaginella moellendorffii HOM05D006748 ORTHO05D008553 3.4e-23 111.7 87 63.2
AUR62021580 Chenopodium quinoa HOM05D006748 ORTHO05D008553 7.6e-23 110.5 77 72.7
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 2.2e-22 109.0 89 65.2
ATR0064G062 Amborella trichopoda HOM05D006748 ORTHO05D008553 3.2e-21 105.1 74 67.6
Mapoly0019s0070 Marchantia polymorpha HOM05D006748 ORTHO05D008553 3.5e-20 101.7 87 57.5
Sabra15G0081500 Salix brachista HOM05D006748 ORTHO05D008553 7.8e-20 100.5 81 64.2
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 8.7e-19 97.1 71 69.0
CBR_g90015 Chara braunii HOM05D006748 ORTHO05D008553 1.1e-18 96.7 91 48.4
BraA10t44914Z Brassica rapa HOM05D006748 ORTHO05D008553 2.5e-18 95.5 57 80.7
Pp3c14_26790 Physcomitrium patens HOM05D006748 ORTHO05D008553 2.5e-18 95.5 95 50.5
A10p28650 Brassica napus HOM05D006748 ORTHO05D008553 2.8e-17 92.0 82 58.5
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 9.0e-16 87.0 72 58.3
MELO3C017217.2 Cucumis melo HOM05D006748 ORTHO05D008553 9.9e-15 83.6 54 75.9
HanXRQChr14g0449601 Helianthus annuus HOM05D006748 ORTHO05D008553 1.1e-10 70.1 59 64.4
COL.COLO4_37587 Corchorus olitorius HOM05D006748 ORTHO05D008553 2.8e-09 65.5 46 71.7
SEGI_29622 Sequoiadendron giganteum HOM05D006748 ORTHO05D008553 9.0e-08 60.5 45 66.7
CDE02G4382 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 4.5e-07 58.2 45 64.4


User provided reference genes

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