Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g026600 Solanum pennellii HOM05D014920 ORTHO05D009802 1.1e-102 376.7 194 100.0
Solyc06g069340.1 Solanum lycopersicum HOM05D014920 ORTHO05D009802 5.0e-68 261.5 146 94.5
PGSC0003DMG400004059 Solanum tuberosum HOM05D014920 ORTHO05D009802 1.2e-61 240.4 147 87.8
Nitab4.5_0004190g0010 Nicotiana tabacum HOM05D014920 ORTHO05D009802 1.4e-14 84.0 158 45.6
Nitab4.5_0001432g0130 Nicotiana tabacum HOM05D014920 ORTHO05D009802 2.4e-14 83.2 155 43.9
Nitab4.5_0000646g0100 Nicotiana tabacum HOM05D014920 ORTHO05D009802 1.6e-13 80.5 142 46.5
Nitab4.5_0002805g0110 Nicotiana tabacum HOM05D014920 ORTHO05D009802 5.1e-12 75.5 149 47.0
CAN.G982.29 Capsicum annuum HOM05D000541 ORTHO05D000137 2.8e-10 69.7 147 42.9
Phvul.009G190900 Phaseolus vulgaris HOM05D008563 ORTHO05D009802 4.0e-09 65.9 95 49.5
Gohir.D12G187700 Gossypium hirsutum HOM05D008563 ORTHO05D009802 9.9e-08 61.2 72 52.8
Gorai.008G201100 Gossypium raimondii HOM05D008563 ORTHO05D009802 9.9e-08 61.2 72 52.8
Lalb_Chr10g0092501 Lupinus albus HOM05D008889 ORTHO05D009956 1.3e-07 60.8 121 42.1
Medtr2g058870 Medicago truncatula HOM05D008563 ORTHO05D009956 2.2e-07 60.1 143 38.5
PGSC0003DMG400024516 Solanum tuberosum HOM05D014920 ORTHO05D009802 2.2e-07 60.1 153 41.2
ECA246G0528 Erigeron canadensis HOM05D008563 ORTHO05D009802 2.9e-07 59.7 131 35.9
Phvul.008G023501 Phaseolus vulgaris HOM05D008889 ORTHO05D009956 2.9e-07 59.7 80 52.5
DCAR_011590 Daucus carota HOM05D065511 ORTHO05D009802 3.8e-07 59.3 148 39.9
Lsat_1_v5_gn_4_113140 Lactuca sativa HOM05D038017 ORTHO05D009802 3.8e-07 59.3 78 53.8
Lj1g0003987 Lotus japonicus HOM05D008889 ORTHO05D009956 3.8e-07 59.3 119 45.4
Sed0012187 Sechium edule HOM05D008563 ORTHO05D009802 3.8e-07 59.3 129 38.0
Medtr4g112870 Medicago truncatula HOM05D008563 ORTHO05D009802 4.9e-07 58.9 145 39.3
Cpa.g.sc3.202 Carica papaya HOM05D014920 ORTHO05D009802 6.4e-07 58.5 81 48.1
TPR.G3280 Trifolium pratense HOM05D008889 ORTHO05D009956 6.4e-07 58.5 113 44.2
TWI60G1323 Tripterygium wilfordii HOM05D008889 ORTHO05D009956 1.1e-06 57.8 72 52.8
THA.LOC104805540 Tarenaya hassleriana HOM05D009227 ORTHO05D009956 1.4e-06 57.4 143 34.3
CSS0034251 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 1.9e-06 57.0 147 39.5
CSS0042453 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 1.9e-06 57.0 147 39.5
Manes.01G105700 Manihot esculenta HOM05D008889 ORTHO05D009956 1.9e-06 57.0 101 45.5
Ca_23534_v3 Cicer arietinum L. HOM05D008889 ORTHO05D009956 3.2e-06 56.2 127 41.7
Lalb_Chr04g0258271 Lupinus albus HOM05D008889 ORTHO05D009956 4.2e-06 55.8 115 39.1
Aa31LG9G16880 Aethionema arabicum HOM05D009227 ORTHO05D009956 7.1e-06 55.1 97 44.3
CAN.G184.15 Capsicum annuum HOM05D011353 ORTHO05D009802 9.3e-06 54.7 136 41.2
TPR.G15318 Trifolium pratense HOM05D008563 ORTHO05D009802 9.3e-06 54.7 67 53.7


User provided reference genes

Program Settings