Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g021250 Solanum pennellii HOM05D006869 ORTHO05D008641 7.4e-66 253.8 137 100.0
PGSC0003DMG400026597 Solanum tuberosum HOM05D006869 ORTHO05D008641 1.7e-62 242.7 137 97.1
Nitab4.5_0003100g0080 Nicotiana tabacum HOM05D006869 ORTHO05D008641 1.3e-41 173.3 159 69.2
CSS0028384 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 5.9e-39 164.5 121 72.7
CSS0030709 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 5.9e-39 164.5 121 72.7
Atru.chr6.1763 Acer truncatum HOM05D006869 ORTHO05D008641 3.8e-38 161.8 137 68.6
Potri.001G145500 Populus trichocarpa HOM05D006869 ORTHO05D008641 5.0e-38 161.4 132 67.4
MSTRG.17527 Avicennia marina HOM05D006869 ORTHO05D008641 2.5e-37 159.1 124 69.4
COL.COLO4_17099 Corchorus olitorius HOM05D006869 ORTHO05D008641 9.4e-37 157.1 131 63.4
Ciclev10033051m.g Citrus clementina HOM05D006869 ORTHO05D008641 2.1e-36 156.0 131 65.6
Migut.D00490 Erythranthe guttata HOM05D006869 ORTHO05D008641 3.6e-36 155.2 128 65.6
Prupe.5G042800 Prunus persica HOM05D006869 ORTHO05D008641 1.0e-35 153.7 126 64.3
TPR.G26622 Trifolium pratense HOM05D006869 ORTHO05D008641 3.9e-35 151.8 124 66.9
Actinidia09229 Actinidia chinensis HOM05D002067 ORTHO05D002244 8.8e-35 150.6 122 68.9
Thecc.03G232900 Theobroma cacao HOM05D006869 ORTHO05D008641 1.1e-34 150.2 130 63.1
CiPaw.12G061200 Carya illinoinensis HOM05D006869 ORTHO05D008641 1.5e-34 149.8 113 70.8
Lj3g0015338 Lotus japonicus HOM05D006869 ORTHO05D008641 1.5e-34 149.8 128 65.6
TWI15G0987 Tripterygium wilfordii HOM05D006869 ORTHO05D008641 4.4e-34 148.3 138 63.8
Ca_03396_v3 Cicer arietinum L. HOM05D006869 ORTHO05D008641 7.4e-34 147.5 128 64.8
Duzib205G1446 Durio zibethinus HOM05D006869 ORTHO05D008641 7.4e-34 147.5 130 61.5
Hma1.2p1_0414F.1_g147870 Hydrangea macrophylla HOM05D006869 ORTHO05D008641 9.7e-34 147.1 118 67.8
Medtr2g071640 Medicago truncatula HOM05D006869 ORTHO05D008641 9.7e-34 147.1 125 63.2
MD06G1029000 Malus domestica HOM05D006869 ORTHO05D008641 1.3e-33 146.7 119 66.4
Manes.15G174500 Manihot esculenta HOM05D006869 ORTHO05D008641 1.3e-33 146.7 123 64.2
Phvul.005G061500 Phaseolus vulgaris HOM05D006869 ORTHO05D008641 4.8e-33 144.8 124 66.9
RcHm_v2.0_Chr7g0208861 Rosa chinensis HOM05D006869 ORTHO05D008641 6.3e-33 144.4 126 61.9
MELO3C003378.2 Cucumis melo HOM05D006869 ORTHO05D008641 1.1e-32 143.7 125 60.0
CsaV3_1G016990 Cucumis sativus L. HOM05D006869 ORTHO05D008641 1.1e-32 143.7 120 62.5
CsaV3_3G049460 Cucumis sativus L. HOM05D006869 ORTHO05D008641 1.1e-32 143.7 120 62.5
Cpa.g.sc6.427 Carica papaya HOM05D006869 ORTHO05D008641 4.1e-32 141.7 130 63.8
ECA233G4479 Erigeron canadensis HOM05D006869 ORTHO05D008641 4.1e-32 141.7 121 64.5
Gohir.A09G198300 Gossypium hirsutum HOM05D006869 ORTHO05D008641 4.1e-32 141.7 131 59.5
VMungo1080G1596 Vigna mungo HOM05D006869 ORTHO05D008641 4.1e-32 141.7 124 65.3
Gohir.D09G192900 Gossypium hirsutum HOM05D006869 ORTHO05D008641 7.0e-32 141.0 131 59.5
FvH4_5g21430 Fragaria vesca HOM05D006869 ORTHO05D008641 9.1e-32 140.6 129 60.5
Sabra01G0114100 Salix brachista HOM05D006869 ORTHO05D008641 9.1e-32 140.6 162 51.9
GSVIVG01013242001 Vitis vinifera HOM05D006869 ORTHO05D008641 9.1e-32 140.6 112 66.1
FAN08G2623 Fragaria x ananassa HOM05D006869 ORTHO05D008641 1.2e-31 140.2 134 59.0
Glyma.13G259900 Glycine max HOM05D006869 ORTHO05D008641 1.2e-31 140.2 112 68.8
CiPaw.11G089700 Carya illinoinensis HOM05D006869 ORTHO05D008641 2.0e-31 139.4 112 67.0
FAN13G1368 Fragaria x ananassa HOM05D006869 ORTHO05D008641 3.5e-31 138.7 127 60.6
Nn1g00590 Nelumbo nucifera HOM05D006869 ORTHO05D008641 3.5e-31 138.7 128 62.5
TAR375G0341 Trochodendron aralioides HOM05D006869 ORTHO05D008641 5.9e-31 137.9 119 65.5
FAN04G2266 Fragaria x ananassa HOM05D006869 ORTHO05D008641 2.9e-30 135.6 135 58.5
Peaxi162Scf00497g00098 Petunia axillaris HOM05D006869 ORTHO05D008641 5.0e-30 134.8 77 92.2
Nitab4.5_0004658g0060 Nicotiana tabacum HOM05D006869 ORTHO05D008641 6.5e-30 134.4 124 66.9
Hund14421 Selenicereus undatus HOM05D006869 ORTHO05D008641 6.5e-30 134.4 107 72.0
FAN18G0870 Fragaria x ananassa HOM05D006869 ORTHO05D008641 8.5e-30 134.0 135 57.8
Sc22g0001440 Simmondsia chinensis HOM05D006869 ORTHO05D008641 1.1e-29 133.7 120 64.2
Aqoxy3G02480 Aquilegia oxysepala HOM05D006869 ORTHO05D008641 1.4e-29 133.3 119 63.0
arahy.Tifrunner.gnm1.ann1.TLF144 Arachis hypogaea HOM05D006869 ORTHO05D008641 1.4e-29 133.3 132 56.8
PGR042G2539 Punica granatum HOM05D006869 ORTHO05D008641 1.4e-29 133.3 121 58.7
PSO675G8621 Papaver somniferum HOM05D006869 ORTHO05D008641 1.9e-29 132.9 125 59.2
PSO832G0919 Papaver somniferum HOM05D006869 ORTHO05D008641 2.5e-29 132.5 125 58.4
arahy.Tifrunner.gnm1.ann1.4F5UFQ Arachis hypogaea HOM05D006869 ORTHO05D008641 7.2e-29 131.0 132 56.1
arahy.Tifrunner.gnm1.ann1.U4TMK5 Arachis hypogaea HOM05D006869 ORTHO05D008641 9.4e-29 130.6 116 60.3
Lalb_Chr25g0285441 Lupinus albus HOM05D006869 ORTHO05D008641 9.4e-29 130.6 109 63.3
Actinidia14827 Actinidia chinensis HOM05D006869 ORTHO05D008641 2.1e-28 129.4 113 62.8
PSO732G0001 Papaver somniferum HOM05D006869 ORTHO05D008641 3.6e-28 128.6 125 57.6
HanXRQChr08g0227941 Helianthus annuus HOM05D006869 ORTHO05D008641 6.1e-28 127.9 132 56.8
DCAR_005606 Daucus carota HOM05D006869 ORTHO05D008641 8.0e-28 127.5 140 55.7
DCAR_024975 Daucus carota HOM05D006869 ORTHO05D008641 1.0e-27 127.1 124 57.3
Eucgr.E00305 Eucalyptus grandis HOM05D006869 ORTHO05D008641 1.0e-27 127.1 105 64.8
CANSAT21G0218 Cannabis sativa HOM05D006869 ORTHO05D008641 2.3e-27 125.9 120 57.5
Dinv25192 Davidia involucrata HOM05D006869 ORTHO05D008641 2.3e-27 125.9 123 58.5
ClCG09G012310 Citrullus lanatus HOM05D006869 ORTHO05D008641 1.1e-26 123.6 137 51.1
Gorai.006G215800 Gossypium raimondii HOM05D006869 ORTHO05D008641 1.1e-26 123.6 167 47.3
Glyma.15G248100 Glycine max HOM05D006869 ORTHO05D008641 3.3e-26 122.1 110 66.4
unitig_746.g26748 Utricularia gibba HOM05D006869 ORTHO05D008641 3.3e-26 122.1 115 58.3
HPP92_026375 Vanilla planifolia HOM05D006869 ORTHO05D008641 2.8e-25 119.0 115 55.7
THA.LOC104798477 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 3.7e-25 118.6 127 53.5
Oeu015441.1 Olea europaea HOM05D006869 ORTHO05D008641 7.0e-24 114.4 89 68.5
THA.LOC104798593 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 7.0e-24 114.4 116 54.3
Carub.0001s3075 Capsella rubella HOM05D006869 ORTHO05D008641 2.6e-23 112.5 125 52.8
Os02g0279600 Oryza sativa ssp. japonica HOM05D006869 ORTHO05D008641 2.6e-23 112.5 109 60.6
Cc08_g02310 Coffea canephora HOM05D006869 ORTHO05D008641 3.5e-23 112.1 83 69.9
Aa31LG2G13630 Aethionema arabicum HOM05D006869 ORTHO05D008641 5.9e-23 111.3 127 52.0
AT1G32370 Arabidopsis thaliana HOM05D006869 ORTHO05D008641 5.9e-23 111.3 116 56.0
Zm00001eb024260 Zea mays HOM05D006869 ORTHO05D008641 7.7e-23 110.9 123 56.9
Thhalv10009100m.g Eutrema salsugineum HOM05D006869 ORTHO05D008641 1.3e-22 110.2 127 51.2
SGA_v2.0_scaffold94G28479 Striga asiatica HOM05D006869 ORTHO05D008641 2.9e-22 109.0 97 61.9
A09p33790 Brassica napus HOM05D006869 ORTHO05D008641 3.8e-22 108.6 130 52.3
BraA09t38929Z Brassica rapa HOM05D006869 ORTHO05D008641 3.8e-22 108.6 130 52.3
Sp1g28510 Schrenkiella parvula HOM05D006869 ORTHO05D008641 3.8e-22 108.6 116 53.4
BcaB07g32921 Brassica carinata HOM05D006869 ORTHO05D008641 5.0e-22 108.2 130 52.3
BcaC05g27275 Brassica carinata HOM05D006869 ORTHO05D008641 5.0e-22 108.2 130 52.3
C05p31830 Brassica napus HOM05D006869 ORTHO05D008641 5.0e-22 108.2 116 55.2
BolC5t31911H Brassica oleracea HOM05D006869 ORTHO05D008641 5.0e-22 108.2 130 52.3
CARHR031750 Cardamine hirsuta HOM05D006869 ORTHO05D008641 8.5e-22 107.5 116 54.3
AL1G46570 Arabidopsis lyrata HOM05D006869 ORTHO05D008641 1.5e-21 106.7 116 54.3
Rhsim07G0123600 Rhododendron simsii HOM05D006869 ORTHO05D008641 3.2e-21 105.5 81 66.7
THA.LOC104822843 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 3.6e-20 102.1 106 53.8
vmacro14155 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 4.7e-20 101.7 75 68.0
SEGI_28722 Sequoiadendron giganteum HOM05D006869 ORTHO05D008641 8.0e-20 100.9 96 58.3
SalBow6G5905 Salvia bowleyana HOM05D006869 ORTHO05D008641 1.4e-19 100.1 78 64.1
ATR0049G078 Amborella trichopoda HOM05D006869 ORTHO05D008641 1.5e-18 96.7 81 61.7
Sed0006536 Sechium edule HOM05D006869 ORTHO05D008641 3.4e-18 95.5 81 60.5
Lsat_1_v5_gn_6_67180 Lactuca sativa HOM05D006869 ORTHO05D008641 1.3e-17 93.6 74 66.2
MBI04_g13865_MAGBIO Magnolia biondii HOM05D006869 ORTHO05D008641 8.3e-17 90.9 86 55.8
Ah.07g200090 Amaranthus hybridus HOM05D006869 ORTHO05D008641 2.4e-16 89.4 103 50.5
EL10Ac5g12174 Beta vulgaris HOM05D006869 ORTHO05D008641 1.3e-14 83.6 114 46.5
Psat1g009440 Pisum sativum HOM05D006869 ORTHO05D008641 1.5e-13 80.1 68 64.7
BolC5t32616H Brassica oleracea HOM05D006869 ORTHO05D008641 1.5e-10 70.1 79 54.4
Haze_08288 Corylus avellana HOM05D006869 ORTHO05D008641 2.0e-10 69.7 76 55.3
Dinv28924 Davidia involucrata HOM05D002067 ORTHO05D002244 2.0e-10 69.7 43 81.4
vmacro23515 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 4.4e-10 68.6 44 75.0
AagrBONN_evm.TU.Sc2ySwM_228.2858 Anthoceros agrestis HOM05D006869 ORTHO05D008641 2.8e-09 65.9 126 37.3
CAN.G982.11 Capsicum annuum HOM05D006869 ORTHO05D008641 6.3e-09 64.7 50 76.0
BcaC05g27873 Brassica carinata HOM05D006869 ORTHO05D008641 3.1e-08 62.4 113 43.4
C05p38760 Brassica napus HOM05D006869 ORTHO05D008641 3.1e-08 62.4 113 43.4
Mapoly0009s0146 Marchantia polymorpha HOM05D006869 ORTHO05D008641 9.1e-08 60.8 103 37.9
Sed0003750 Sechium edule HOM05D006869 ORTHO05D008641 5.9e-07 58.2 51 60.8
PGR142G3578 Punica granatum HOM05D006869 ORTHO05D008641 7.7e-07 57.8 57 49.1
Zm00001eb390630 Zea mays HOM05D006869 ORTHO05D008641 2.9e-06 55.8 52 59.6


User provided reference genes

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