Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g021040 Solanum pennellii HOM05D006859 ORTHO05D007990 5.7e-146 521.2 315 100.0
PGSC0003DMG400024153 Solanum tuberosum HOM05D006859 ORTHO05D007990 4.5e-127 458.4 332 86.1
Solyc06g060890.4 Solanum lycopersicum HOM05D006859 ORTHO05D007990 8.6e-110 401.0 250 94.0
Nitab4.5_0000506g0100 Nicotiana tabacum HOM05D006859 ORTHO05D007990 1.2e-100 370.5 306 77.1
Nitab4.5_0003456g0040 Nicotiana tabacum HOM05D006859 ORTHO05D007990 3.4e-98 362.5 335 71.9
CSS0046225 Camellia sinensis var. sinensis HOM05D006859 ORTHO05D007990 4.2e-72 275.8 298 62.1
Dinv28858 Davidia involucrata HOM05D006859 ORTHO05D007990 1.2e-71 274.2 276 63.0
CAN.G62.4 Capsicum annuum HOM05D006859 ORTHO05D007990 8.7e-70 268.1 182 81.3
Prupe.5G059200 Prunus persica HOM05D006859 ORTHO05D007990 2.8e-68 263.1 302 57.6
vmacro00041 Vaccinium macrocarpon HOM05D006859 ORTHO05D007990 1.8e-67 260.4 283 60.4
MD00G1165000 Malus domestica HOM05D006859 ORTHO05D007990 2.4e-67 260.0 289 59.5
QL12p009356 Quercus lobata HOM05D006859 ORTHO05D007990 2.4e-67 260.0 299 56.2
Actinidia25901 Actinidia chinensis HOM05D006859 ORTHO05D007990 3.1e-67 259.6 277 61.0
Oeu017213.1 Olea europaea HOM05D006859 ORTHO05D007990 1.2e-66 257.7 289 59.2
Potri.003G082200 Populus trichocarpa HOM05D006859 ORTHO05D007990 1.4e-64 250.8 301 54.5
Cc08_g11510 Coffea canephora HOM05D006859 ORTHO05D007990 5.4e-64 248.8 295 56.9
FvH4_5g20140 Fragaria vesca HOM05D006859 ORTHO05D007990 9.3e-64 248.1 285 56.1
Eucgr.D02124 Eucalyptus grandis HOM05D006859 ORTHO05D007990 1.2e-63 247.7 276 57.6
Sabra03G0053000 Salix brachista HOM05D006859 ORTHO05D007990 1.2e-63 247.7 301 54.8
Atru.chr9.1231 Acer truncatum HOM05D006859 ORTHO05D007990 4.6e-63 245.7 273 59.3
Hund11327 Selenicereus undatus HOM05D006859 ORTHO05D007990 4.6e-63 245.7 298 53.0
RhsimUnG0092900 Rhododendron simsii HOM05D006859 ORTHO05D007990 1.8e-62 243.8 285 58.6
PGR031G1874 Punica granatum HOM05D006859 ORTHO05D007990 2.3e-62 243.4 274 58.8
Gohir.D08G184600 Gossypium hirsutum HOM05D006859 ORTHO05D007990 6.7e-62 241.9 286 55.2
FAN18G2706 Fragaria x ananassa HOM05D006859 ORTHO05D007990 1.5e-61 240.7 286 55.9
PSO717G0098 Papaver somniferum HOM05D006859 ORTHO05D007990 1.9e-61 240.4 303 52.5
Migut.A01048 Erythranthe guttata HOM05D006859 ORTHO05D007990 5.6e-61 238.8 288 55.2
Manes.01G086700 Manihot esculenta HOM05D006859 ORTHO05D007990 5.6e-61 238.8 300 54.7
Gorai.004G193900 Gossypium raimondii HOM05D006859 ORTHO05D007990 9.6e-61 238.0 286 54.5
FAN08G0582 Fragaria x ananassa HOM05D006859 ORTHO05D007990 1.6e-60 237.3 284 55.6
RcHm_v2.0_Chr7g0205091 Rosa chinensis HOM05D006859 ORTHO05D007990 4.8e-60 235.7 289 55.0
TAR636G0545 Trochodendron aralioides HOM05D006859 ORTHO05D007990 4.8e-60 235.7 300 56.0
PSO675G5712 Papaver somniferum HOM05D006859 ORTHO05D007990 6.2e-60 235.3 302 51.7
Aqoxy7G00861 Aquilegia oxysepala HOM05D006859 ORTHO05D007990 2.4e-59 233.4 279 54.8
CANSAT21G2559 Cannabis sativa HOM05D006859 ORTHO05D007990 2.4e-59 233.4 303 52.1
MD04G1050900 Malus domestica HOM05D006859 ORTHO05D007990 2.4e-59 233.4 273 57.1
EL10Ac5g12291 Beta vulgaris HOM05D006859 ORTHO05D007990 5.3e-59 232.3 294 54.1
TWI15G0070 Tripterygium wilfordii HOM05D006859 ORTHO05D007990 5.3e-59 232.3 276 54.7
Duzib205G1414 Durio zibethinus HOM05D006859 ORTHO05D007990 6.9e-59 231.9 285 53.0
Medtr5g013280 Medicago truncatula HOM05D006859 ORTHO05D007990 1.2e-58 231.1 287 54.4
Duzib068G0861 Durio zibethinus HOM05D006859 ORTHO05D007990 1.5e-58 230.7 285 53.3
FAN04G1798 Fragaria x ananassa HOM05D006859 ORTHO05D007990 5.8e-58 228.8 285 55.4
Peaxi162Scf00190g00099 Petunia axillaris HOM05D006859 ORTHO05D007990 5.8e-58 228.8 193 68.9
Gohir.A08G165800 Gossypium hirsutum HOM05D006859 ORTHO05D007990 9.9e-58 228.0 289 51.9
Phvul.002G001000 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 1.4e-56 224.2 286 54.2
Lj2g0014108 Lotus japonicus HOM05D006859 ORTHO05D007990 2.4e-56 223.4 292 53.4
Cpa.g.sc89.10 Carica papaya HOM05D006859 ORTHO05D007990 9.3e-56 221.5 301 51.2
TPR.G31422 Trifolium pratense HOM05D006859 ORTHO05D007990 2.1e-55 220.3 276 54.3
VMungo1215G2710 Vigna mungo HOM05D006859 ORTHO05D007990 2.7e-55 219.9 279 55.9
Psat2g176200 Pisum sativum HOM05D006859 ORTHO05D007990 1.8e-54 217.2 273 55.3
ECA236G3610 Erigeron canadensis HOM05D006859 ORTHO05D007990 6.7e-54 215.3 277 53.1
MBI04_g28364_MAGBIO Magnolia biondii HOM05D006859 ORTHO05D007990 1.1e-53 214.5 275 54.5
Nn1g00823 Nelumbo nucifera HOM05D006859 ORTHO05D007990 3.3e-53 213.0 274 54.7
CiPaw.11G069300 Carya illinoinensis HOM05D006859 ORTHO05D007990 4.8e-52 209.1 239 54.8
Glyma.01G205600 Glycine max HOM05D006859 ORTHO05D007990 3.1e-51 206.5 288 54.5
HanXRQChr06g0164541 Helianthus annuus HOM05D006859 ORTHO05D007990 5.3e-51 205.7 279 52.0
Ciclev10021440m.g Citrus clementina HOM05D006859 ORTHO05D007990 2.6e-50 203.4 301 45.8
MELO3C003330.2 Cucumis melo HOM05D006859 ORTHO05D007990 5.8e-50 202.2 272 48.9
Lalb_Chr16g0379391 Lupinus albus HOM05D006859 ORTHO05D007990 1.3e-49 201.1 283 51.6
Actinidia02186 Actinidia chinensis HOM05D006859 ORTHO05D007990 2.2e-49 200.3 278 52.2
Cfa012667 Carpinus fangiana HOM05D006859 ORTHO05D007990 1.1e-48 198.0 292 51.7
Lsat_1_v5_gn_1_53480 Lactuca sativa HOM05D006859 ORTHO05D007990 1.1e-45 188.0 279 49.5
arahy.Tifrunner.gnm1.ann1.B2NILF Arachis hypogaea HOM05D006859 ORTHO05D007990 4.3e-45 186.0 317 47.6
arahy.Tifrunner.gnm1.ann1.WYE05V Arachis hypogaea HOM05D006859 ORTHO05D007990 4.3e-45 186.0 317 47.6
Lj2C227G12 Lonicera japonica HOM05D006859 ORTHO05D007990 5.7e-45 185.7 241 52.7
Thecc.03G243500 Theobroma cacao HOM05D006859 ORTHO05D007990 4.8e-44 182.6 237 55.3
Sc01g0008110 Simmondsia chinensis HOM05D006859 ORTHO05D007990 6.9e-43 178.7 245 52.2
AUR62018861 Chenopodium quinoa HOM05D006859 ORTHO05D007990 5.9e-42 175.6 232 50.0
ATR0665G206 Amborella trichopoda HOM05D006859 ORTHO05D007990 1.3e-41 174.5 270 48.9
Ca_24604_v3 Cicer arietinum L. HOM05D006859 ORTHO05D007990 1.1e-40 171.4 300 43.0
HPP92_014892 Vanilla planifolia HOM05D006859 ORTHO05D007990 1.4e-40 171.0 270 44.1
unitig_8.g3018 Utricularia gibba HOM05D000481 ORTHO05D007990 2.1e-39 167.2 283 47.7
CsaV3_3G049860 Cucumis sativus L. HOM05D006859 ORTHO05D007990 7.9e-39 165.2 269 44.2
Gohir.D03G167400 Gossypium hirsutum HOM05D006859 ORTHO05D007990 1.0e-38 164.9 243 45.3
SalBow6G1554 Salvia bowleyana HOM05D006859 ORTHO05D007990 3.0e-38 163.3 243 51.4
Os10g0563400 Oryza sativa ssp. japonica HOM05D006859 ORTHO05D007990 3.9e-38 162.9 288 45.8
DCAR_004596 Daucus carota HOM05D006859 ORTHO05D007990 1.1e-37 161.4 247 49.4
ClCG09G012800 Citrullus lanatus HOM05D006859 ORTHO05D007990 5.7e-37 159.1 270 41.5
Gorai.003G177100 Gossypium raimondii HOM05D006859 ORTHO05D007990 7.4e-37 158.7 243 41.2
Zm00001eb391020 Zea mays HOM05D006859 ORTHO05D007990 1.1e-35 154.8 273 45.8
CDE11G0841 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 1.8e-35 154.1 226 54.0
Hma1.2p1_0840F.1_g226470 Hydrangea macrophylla HOM05D006859 ORTHO05D007990 4.1e-35 152.9 253 43.1
Carub.0007s2385 Capsella rubella HOM05D006859 ORTHO05D007990 9.1e-35 151.8 309 38.8
Gohir.A03G005200 Gossypium hirsutum HOM05D006859 ORTHO05D007990 1.5e-34 151.0 243 44.0
AT4G17540 Arabidopsis thaliana HOM05D006859 ORTHO05D007990 3.4e-34 149.8 295 40.3
CARHR224240 Cardamine hirsuta HOM05D006859 ORTHO05D007990 4.5e-34 149.4 302 40.4
Sp7g16620 Schrenkiella parvula HOM05D006859 ORTHO05D007990 1.3e-33 147.9 297 41.1
BcaNung00082 Brassica carinata HOM05D006859 ORTHO05D007990 3.8e-33 146.4 286 39.2
Thhalv10025654m.g Eutrema salsugineum HOM05D006859 ORTHO05D007990 5.0e-33 146.0 277 41.2
Glyma.11G037300 Glycine max HOM05D006859 ORTHO05D007990 9.4e-32 141.7 241 40.2
A01p09620 Brassica napus HOM05D006859 ORTHO05D007990 1.2e-31 141.4 296 38.9
BraA01t00904Z Brassica rapa HOM05D006859 ORTHO05D007990 3.6e-31 139.8 296 38.5
THA.LOC104798356 Tarenaya hassleriana HOM05D006859 ORTHO05D007990 1.8e-30 137.5 274 42.3
BolC1t01085H Brassica oleracea HOM05D006859 ORTHO05D007990 8.8e-30 135.2 278 38.5
BcaC09g51632 Brassica carinata HOM05D006859 ORTHO05D007990 1.5e-29 134.4 278 38.8
SGA_v2.0_scaffold199G41240 Striga asiatica HOM05D006859 ORTHO05D007990 3.3e-29 133.3 271 39.9
C01p11190 Brassica napus HOM05D006859 ORTHO05D007990 7.4e-29 132.1 278 38.1
Oeu040677.2 Olea europaea HOM05D006859 ORTHO05D007990 9.7e-29 131.7 172 46.5
GSVIVG01007347001 Vitis vinifera HOM05D006859 ORTHO05D007990 6.5e-25 119.0 76 82.9
AUR62007150 Chenopodium quinoa HOM05D006859 ORTHO05D007990 2.7e-23 113.6 208 43.8
AL7G37080 Arabidopsis lyrata HOM05D006859 ORTHO05D007990 2.2e-20 104.0 245 37.1
Sed0000052 Sechium edule HOM05D006859 ORTHO05D007990 7.0e-19 99.0 168 39.9
Ah.07g199030 Amaranthus hybridus HOM05D006859 ORTHO05D007990 1.6e-18 97.8 87 65.5
Aa31LG6G280 Aethionema arabicum HOM05D006859 ORTHO05D007990 4.5e-18 96.3 237 36.7
DCAR_008336 Daucus carota HOM05D002294 ORTHO05D002367 5.9e-18 95.9 254 32.7
GSVIVG01007348001 Vitis vinifera HOM05D006859 ORTHO05D007990 2.0e-13 80.9 130 40.8
PSO717G0090 Papaver somniferum HOM05D006859 ORTHO05D007990 2.2e-12 77.4 254 33.9
Glyma.11G037400 Glycine max HOM05D006859 ORTHO05D007990 4.1e-11 73.2 274 29.2
Phvul.002G001100 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 9.1e-11 72.0 252 34.9
AagrBONN_evm.TU.Sc2ySwM_228.2564 Anthoceros agrestis HOM05D006859 ORTHO05D007990 1.6e-10 71.2 275 30.9
VMungo1215G2895 Vigna mungo HOM05D006859 ORTHO05D007990 5.9e-10 69.3 254 30.3
COL.COLO4_21682 Corchorus olitorius HOM05D006859 ORTHO05D007990 7.2e-08 62.4 154 35.1
Glyma.01G205500 Glycine max HOM05D006859 ORTHO05D007990 2.7e-07 60.5 234 29.9
Mapoly0075s0082 Marchantia polymorpha HOM05D006859 ORTHO05D007990 3.0e-06 57.0 225 35.1


User provided reference genes

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