Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g020920 Solanum pennellii HOM05D000031 ORTHO05D393473 2.3e-31 138.3 69 100.0
PGSC0003DMG400013798 Solanum tuberosum HOM05D000031 ORTHO05D001033 4.8e-13 77.4 65 63.1
PGSC0003DMG400011876 Solanum tuberosum HOM05D000031 ORTHO05D001033 6.2e-13 77.0 73 57.5
PGSC0003DMG400013802 Solanum tuberosum HOM05D000031 ORTHO05D001033 1.1e-12 76.3 69 62.3
PGSC0003DMG400013804 Solanum tuberosum HOM05D000031 ORTHO05D001033 4.0e-12 74.3 73 57.5
Sopen06g020810 Solanum pennellii HOM05D000031 ORTHO05D001033 2.0e-11 72.0 67 55.2
PGSC0003DMG400024149 Solanum tuberosum HOM05D000031 ORTHO05D001033 4.5e-11 70.9 62 66.1
PGSC0003DMG400011878 Solanum tuberosum HOM05D000031 ORTHO05D001033 7.6e-11 70.1 67 58.2
PGSC0003DMG400024147 Solanum tuberosum HOM05D000031 ORTHO05D001033 7.6e-11 70.1 67 58.2
PGSC0003DMG400011877 Solanum tuberosum HOM05D000031 ORTHO05D001033 1.4e-09 65.9 66 51.5
Solyc06g060680.2 Solanum lycopersicum HOM05D000031 ORTHO05D001033 1.6e-08 62.4 45 68.9
PGSC0003DMG400034531 Solanum tuberosum HOM05D000031 ORTHO05D001033 7.9e-08 60.1 65 52.3
PGSC0003DMG400013801 Solanum tuberosum HOM05D000031 ORTHO05D001033 3.0e-07 58.2 77 49.4
PGSC0003DMG400013803 Solanum tuberosum HOM05D000031 ORTHO05D001033 3.0e-07 58.2 65 52.3
Peaxi162Scf01022g00031 Petunia axillaris HOM05D000031 ORTHO05D001033 3.9e-07 57.8 34 73.5
CAN.G62.32 Capsicum annuum HOM05D000031 ORTHO05D001033 8.7e-07 56.6 63 52.4
PGSC0003DMG400024150 Solanum tuberosum HOM05D000031 ORTHO05D001033 1.1e-06 56.2 64 50.0
CAN.G1143.16 Capsicum annuum HOM05D000225 ORTHO05D002520 1.5e-06 55.8 47 55.3
CAN.G62.30 Capsicum annuum HOM05D000031 ORTHO05D001033 1.5e-06 55.8 70 47.1
Solyc03g121050.3 Solanum lycopersicum HOM05D000225 ORTHO05D002520 1.5e-06 55.8 47 55.3
Sopen03g039880 Solanum pennellii HOM05D000225 ORTHO05D002520 1.5e-06 55.8 47 55.3
PGSC0003DMG400002526 Solanum tuberosum HOM05D000225 ORTHO05D002520 1.5e-06 55.8 47 55.3
PGSC0003DMG400013797 Solanum tuberosum HOM05D000031 ORTHO05D001033 1.5e-06 55.8 45 62.2
Sopen06g020910 Solanum pennellii HOM05D000031 ORTHO05D001033 1.9e-06 55.5 37 62.2
ECA246G2999 Erigeron canadensis HOM05D000031 ORTHO05D000030 2.5e-06 55.1 46 56.5
Nitab4.5_0004937g0070 Nicotiana tabacum HOM05D000031 ORTHO05D001033 2.5e-06 55.1 35 65.7
Nitab4.5_0004969g0020 Nicotiana tabacum HOM05D000225 ORTHO05D002520 2.5e-06 55.1 47 55.3
Nitab4.5_0008646g0010 Nicotiana tabacum HOM05D000225 ORTHO05D002520 2.5e-06 55.1 47 55.3
SalBow1G1461 Salvia bowleyana HOM05D000225 ORTHO05D001817 2.5e-06 55.1 50 52.0
Peaxi162Scf01022g00022 Petunia axillaris HOM05D000031 ORTHO05D001033 3.3e-06 54.7 36 63.9
ECA246G1612 Erigeron canadensis HOM05D000031 ORTHO05D000001 4.3e-06 54.3 38 60.5
ECA246G2816 Erigeron canadensis HOM05D000031 ORTHO05D000030 4.3e-06 54.3 46 54.3
Lsat_1_v5_gn_6_104461 Lactuca sativa HOM05D000031 ORTHO05D000030 4.3e-06 54.3 46 56.5
Peaxi162Scf00038g01033 Petunia axillaris HOM05D000225 ORTHO05D002520 4.3e-06 54.3 34 64.7
Nitab4.5_0000102g0180 Nicotiana tabacum HOM05D000031 ORTHO05D001033 5.6e-06 53.9 54 51.9
Nitab4.5_0002027g0060 Nicotiana tabacum HOM05D000031 ORTHO05D001033 5.6e-06 53.9 74 39.2
Nitab4.5_0002372g0020 Nicotiana tabacum HOM05D000031 ORTHO05D001033 5.6e-06 53.9 54 51.9
Thecc.05G300700 Theobroma cacao HOM05D000031 ORTHO05D001033 5.6e-06 53.9 53 47.2
ECA236G2686 Erigeron canadensis HOM05D000031 ORTHO05D000030 7.4e-06 53.5 46 54.3
HanXRQChr10g0278141 Helianthus annuus HOM05D000031 ORTHO05D000030 7.4e-06 53.5 46 52.2
Lsat_1_v5_gn_8_47041 Lactuca sativa HOM05D003172 ORTHO05D003708 7.4e-06 53.5 36 55.6
Lsat_1_v5_gn_8_48940 Lactuca sativa HOM05D000041 ORTHO05D000452 7.4e-06 53.5 36 55.6
Manes.02G171800 Manihot esculenta HOM05D000031 ORTHO05D000030 7.4e-06 53.5 43 53.5
Nitab4.5_0004937g0010 Nicotiana tabacum HOM05D000031 ORTHO05D001033 7.4e-06 53.5 34 70.6
Os10g0326200 Oryza sativa ssp. japonica HOM05D000031 ORTHO05D014247 7.4e-06 53.5 40 55.0
Sed0028192 Sechium edule HOM05D000031 ORTHO05D000030 7.4e-06 53.5 42 54.8
THA.LOC104811813 Tarenaya hassleriana HOM05D000237 ORTHO05D000535 7.4e-06 53.5 38 65.8
HanXRQChr10g0277941 Helianthus annuus HOM05D000031 ORTHO05D000030 9.6e-06 53.1 49 51.0
Lsat_1_v5_gn_6_104441 Lactuca sativa HOM05D000031 ORTHO05D000030 9.6e-06 53.1 46 54.3
Lj1g0014811 Lotus japonicus HOM05D000085 ORTHO05D009791 9.6e-06 53.1 38 52.6
Phvul.009G133000 Phaseolus vulgaris HOM05D000085 ORTHO05D009791 9.6e-06 53.1 38 50.0
RcHm_v2.0_Chr4g0403231 Rosa chinensis HOM05D000021 ORTHO05D000010 9.6e-06 53.1 35 60.0
VMungo1309G2437 Vigna mungo HOM05D000085 ORTHO05D009791 9.6e-06 53.1 38 50.0


User provided reference genes

Program Settings