Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g020420 Solanum pennellii HOM05D007582 ORTHO05D009645 9.4e-61 236.5 106 100.0
Solyc06g060300.1 Solanum lycopersicum HOM05D007582 ORTHO05D009645 1.0e-59 233.0 106 98.1
CAN.G1040.1 Capsicum annuum HOM05D007582 ORTHO05D009645 4.1e-56 221.1 108 91.7
PGSC0003DMG400041136 Solanum tuberosum HOM05D007582 ORTHO05D009645 7.0e-56 220.3 109 94.5
CAN.G1040.3 Capsicum annuum HOM05D007582 ORTHO05D009645 3.5e-55 218.0 108 90.7
Nitab4.5_0003719g0010 Nicotiana tabacum HOM05D007582 ORTHO05D009645 3.8e-54 214.5 111 90.1
Peaxi162Scf00051g00105 Petunia axillaris HOM05D007582 ORTHO05D009645 5.2e-51 204.1 102 89.2
Oeu028565.1 Olea europaea HOM05D007582 ORTHO05D009645 9.8e-50 199.9 113 79.6
TAR381G0802 Trochodendron aralioides HOM05D007582 ORTHO05D009645 2.9e-46 188.3 110 78.2
MSTRG.22408 Avicennia marina HOM05D007582 ORTHO05D009645 5.5e-45 184.1 107 76.6
Dinv07214 Davidia involucrata HOM05D007582 ORTHO05D009645 7.2e-45 183.7 117 71.8
vmacro00836 Vaccinium macrocarpon HOM05D007582 ORTHO05D009645 7.2e-45 183.7 118 70.3
Migut.N03282 Erythranthe guttata HOM05D007582 ORTHO05D009645 2.8e-44 181.8 106 79.2
RhsimUnG0092400 Rhododendron simsii HOM05D007582 ORTHO05D009645 3.6e-44 181.4 119 68.9
Cc10_g11990 Coffea canephora HOM05D007582 ORTHO05D009645 4.7e-44 181.0 115 69.6
Duzib116G0545 Durio zibethinus HOM05D007582 ORTHO05D009645 1.8e-43 179.1 109 71.6
FAN15G1067 Fragaria x ananassa HOM05D007582 ORTHO05D009645 1.8e-43 179.1 109 71.6
RcHm_v2.0_Chr6g0295891 Rosa chinensis HOM05D007582 ORTHO05D009645 2.3e-43 178.7 109 71.6
Aqoxy6G00171 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 4.0e-43 177.9 110 71.8
Lj4P628T29 Lonicera japonica HOM05D007582 ORTHO05D009645 4.0e-43 177.9 108 75.0
SGA_v2.0_scaffold28G11996 Striga asiatica HOM05D007582 ORTHO05D009645 5.2e-43 177.6 112 72.3
CiPaw.05G221000 Carya illinoinensis HOM05D007582 ORTHO05D009645 1.2e-42 176.4 109 73.4
QL09p034466 Quercus lobata HOM05D007582 ORTHO05D009645 1.2e-42 176.4 110 71.8
TWI34G1919 Tripterygium wilfordii HOM05D007582 ORTHO05D009645 1.2e-42 176.4 113 70.8
Haze_00435 Corylus avellana HOM05D007582 ORTHO05D009645 1.5e-42 176.0 111 73.9
MD15G1347500 Malus domestica HOM05D007582 ORTHO05D009645 2.6e-42 175.3 110 70.0
CSS0038396 Camellia sinensis var. sinensis HOM05D007582 ORTHO05D009645 3.4e-42 174.9 119 67.2
SalBow6G5334 Salvia bowleyana HOM05D007582 ORTHO05D009645 3.4e-42 174.9 106 69.8
Nn5g28305 Nelumbo nucifera HOM05D007582 ORTHO05D009645 4.4e-42 174.5 112 71.4
Thecc.08G126100 Theobroma cacao HOM05D007582 ORTHO05D009645 5.7e-42 174.1 112 67.9
MELO3C010615.2 Cucumis melo HOM05D007582 ORTHO05D009645 7.5e-42 173.7 112 68.8
Manes.02G163800 Manihot esculenta HOM05D007582 ORTHO05D009645 9.8e-42 173.3 110 69.1
Potri.002G083100 Populus trichocarpa HOM05D007582 ORTHO05D009645 1.3e-41 172.9 114 65.8
AL1G52300 Arabidopsis lyrata HOM05D007582 ORTHO05D009645 2.2e-41 172.2 106 69.8
Prupe.1G495300 Prunus persica HOM05D007582 ORTHO05D009645 2.2e-41 172.2 112 67.0
THA.LOC104817375 Tarenaya hassleriana HOM05D007582 ORTHO05D009645 2.2e-41 172.2 109 70.6
AT1G44414 Arabidopsis thaliana HOM05D007582 ORTHO05D009645 2.8e-41 171.8 106 69.8
Cpa.g.sc64.90 Carica papaya HOM05D007582 ORTHO05D009645 3.7e-41 171.4 115 67.8
Thhalv10012348m.g Eutrema salsugineum HOM05D007582 ORTHO05D009645 3.7e-41 171.4 106 69.8
Sc22g0004000 Simmondsia chinensis HOM05D007582 ORTHO05D009645 3.7e-41 171.4 110 69.1
ClCG08G005690 Citrullus lanatus HOM05D007582 ORTHO05D009645 6.3e-41 170.6 113 67.3
Lalb_Chr17g0343701 Lupinus albus HOM05D007582 ORTHO05D009645 1.1e-40 169.9 110 68.2
PSO528G0093 Papaver somniferum HOM05D007582 ORTHO05D009645 1.1e-40 169.9 106 73.6
Atru.chr13.1488 Acer truncatum HOM05D007582 ORTHO05D009645 1.4e-40 169.5 106 68.9
CANSAT11G2348 Cannabis sativa HOM05D007582 ORTHO05D009645 1.4e-40 169.5 109 68.8
Carub.0001s3518 Capsella rubella HOM05D007582 ORTHO05D009645 1.8e-40 169.1 106 68.9
PGR042G2864 Punica granatum HOM05D007582 ORTHO05D009645 1.8e-40 169.1 109 67.0
Manes.18G077606 Manihot esculenta HOM05D007582 ORTHO05D009645 2.4e-40 168.7 110 65.5
Lj1g0018777 Lotus japonicus HOM05D007582 ORTHO05D009645 5.4e-40 167.5 111 65.8
Aa31LG6G9350 Aethionema arabicum HOM05D007582 ORTHO05D009645 7.0e-40 167.2 106 67.9
Medtr1g029990 Medicago truncatula HOM05D007582 ORTHO05D009645 7.0e-40 167.2 111 66.7
BcaB07g33949 Brassica carinata HOM05D007582 ORTHO05D009645 9.2e-40 166.8 106 67.9
TPR.G25776 Trifolium pratense HOM05D007582 ORTHO05D009645 1.6e-39 166.0 112 64.3
Aqoxy6G00227 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 2.0e-39 165.6 103 70.9
Nn1g00264 Nelumbo nucifera HOM05D007582 ORTHO05D009645 2.7e-39 165.2 111 66.7
PSO170G1805 Papaver somniferum HOM05D007582 ORTHO05D009645 2.7e-39 165.2 106 71.7
Sp1g33530 Schrenkiella parvula HOM05D007582 ORTHO05D009645 2.7e-39 165.2 106 67.0
Gohir.D06G045500 Gossypium hirsutum HOM05D007582 ORTHO05D009645 4.5e-39 164.5 102 71.6
BolC6t35199H Brassica oleracea HOM05D007582 ORTHO05D009645 1.7e-38 162.5 106 67.9
CARHR035920 Cardamine hirsuta HOM05D007582 ORTHO05D009645 2.3e-38 162.2 106 64.2
Gorai.010G050500 Gossypium raimondii HOM05D007582 ORTHO05D009645 2.3e-38 162.2 102 70.6
Hma1.2p1_0054F.1_g031010 Hydrangea macrophylla HOM05D007582 ORTHO05D009645 5.0e-38 161.0 106 67.9
Glyma.14G150500 Glycine max HOM05D007582 ORTHO05D009645 1.1e-37 159.8 115 60.9
BcaC08g42847 Brassica carinata HOM05D007582 ORTHO05D009645 1.5e-37 159.5 106 67.0
C06p00630 Brassica napus HOM05D007582 ORTHO05D009645 1.5e-37 159.5 106 67.0
VMungo0647G1492 Vigna mungo HOM05D007582 ORTHO05D009645 1.9e-37 159.1 110 61.8
A06p11790 Brassica napus HOM05D007582 ORTHO05D009645 3.3e-37 158.3 106 67.9
Ciclev10002916m.g Citrus clementina HOM05D007582 ORTHO05D009645 7.3e-37 157.1 107 64.5
HanXRQChr15g0465231 Helianthus annuus HOM05D007582 ORTHO05D009645 3.6e-36 154.8 107 68.2
CsaV3_6G034440 Cucumis sativus L. HOM05D007582 ORTHO05D009645 8.0e-36 153.7 103 66.0
CDE06G0523 Ceratophyllum demersum HOM05D007582 ORTHO05D009645 1.0e-35 153.3 112 58.0
ATR0584G060 Amborella trichopoda HOM05D007582 ORTHO05D009645 2.3e-35 152.1 114 58.8
Phvul.008G160900 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 3.0e-35 151.8 110 59.1
Phvul.008G167875 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 3.0e-35 151.8 110 59.1
DCAR_016167 Daucus carota HOM05D007582 ORTHO05D009645 1.5e-34 149.4 106 63.2
SHI08583 Sapria himalayana HOM05D007582 ORTHO05D009645 1.5e-34 149.4 110 60.9
Gohir.A06G045000 Gossypium hirsutum HOM05D007582 ORTHO05D009645 2.6e-34 148.7 84 81.0
arahy.Tifrunner.gnm1.ann1.WSBZ3R Arachis hypogaea HOM05D007582 ORTHO05D009645 4.9e-33 144.4 94 67.0
HPP92_006841 Vanilla planifolia HOM05D007582 ORTHO05D009645 4.9e-33 144.4 119 58.0
Zm00001eb348620 Zea mays HOM05D007582 ORTHO05D009645 6.4e-33 144.1 107 63.6
Sed0002225 Sechium edule HOM05D007582 ORTHO05D009645 1.4e-32 142.9 114 57.0
Psat6g041680 Pisum sativum HOM05D007582 ORTHO05D009139 7.0e-32 140.6 96 60.4
ECA233G1368 Erigeron canadensis HOM05D007582 ORTHO05D009645 2.7e-31 138.7 100 62.0
Os05g0435400 Oryza sativa ssp. japonica HOM05D007582 ORTHO05D009645 3.6e-28 128.3 114 58.8
Nn3g18690 Nelumbo nucifera HOM05D007582 ORTHO05D009645 1.5e-26 122.9 106 53.8
SMO143G0209 Selaginella moellendorffii HOM05D007582 ORTHO05D009645 2.9e-25 118.6 105 47.6
Nitab4.5_0011334g0030 Nicotiana tabacum HOM05D007582 ORTHO05D009645 1.6e-23 112.8 78 66.7
Pp3c19_19360 Physcomitrium patens HOM05D007582 ORTHO05D009645 5.2e-19 97.8 120 39.2
Nn4g24512 Nelumbo nucifera HOM05D007582 ORTHO05D009645 2.6e-18 95.5 71 62.0
Mapoly0085s0071 Marchantia polymorpha HOM05D007582 ORTHO05D009645 6.4e-17 90.9 120 35.0
Aa31LG6G9370 Aethionema arabicum HOM05D007582 ORTHO05D009645 1.8e-11 72.8 106 40.6
AagrBONN_evm.TU.Sc2ySwM_362.1959 Anthoceros agrestis HOM05D007582 ORTHO05D009645 8.9e-11 70.5 67 49.3
Nn1g08790 Nelumbo nucifera HOM05D007582 ORTHO05D009645 2.0e-10 69.3 35 80.0
AagrBONN_evm.TU.Sc2ySwM_362.2461 Anthoceros agrestis HOM05D007582 ORTHO05D009645 2.2e-09 65.9 66 40.9
Aqoxy6G00222 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 1.9e-08 62.8 61 44.3
Phvul.L001669 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 3.2e-08 62.0 42 64.3


User provided reference genes

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