Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g019290 Solanum pennellii HOM05D007633 ORTHO05D008817 5.9e-107 391.0 209 100.0
Solyc06g054140.4 Solanum lycopersicum HOM05D007633 ORTHO05D008817 2.1e-88 329.3 174 94.8
Nitab4.5_0008118g0020 Nicotiana tabacum HOM05D007633 ORTHO05D008817 6.4e-69 264.6 173 75.1
Nitab4.5_0000321g0150 Nicotiana tabacum HOM05D007633 ORTHO05D008817 1.1e-60 237.3 173 70.5
Sopen09g031040 Solanum pennellii HOM05D007633 ORTHO05D008817 3.9e-58 228.8 174 67.2
Peaxi162Scf00192g01119 Petunia axillaris HOM05D007633 ORTHO05D008817 5.1e-58 228.4 168 70.8
Solyc09g082160.4 Solanum lycopersicum HOM05D007633 ORTHO05D008817 5.1e-58 228.4 174 67.2
Nitab4.5_0001342g0010 Nicotiana tabacum HOM05D007633 ORTHO05D008817 1.1e-57 227.3 174 66.7
PGSC0003DMG400032254 Solanum tuberosum HOM05D007633 ORTHO05D008817 1.5e-57 226.9 174 66.7
PGSC0003DMG400016306 Solanum tuberosum HOM05D007633 ORTHO05D008817 1.2e-48 197.2 103 96.1
Peaxi162Scf00092g00615 Petunia axillaris HOM05D007633 ORTHO05D008817 4.9e-45 185.3 176 58.0
Oeu011618.1 Olea europaea HOM05D007633 ORTHO05D008817 2.7e-43 179.5 174 52.3
CSS0018565 Camellia sinensis var. sinensis HOM05D007633 ORTHO05D008817 1.3e-40 170.6 168 51.2
Hma1.2p1_0745F.1_g212150 Hydrangea macrophylla HOM05D007633 ORTHO05D008817 5.3e-39 165.2 173 49.7
Cc03_g03920 Coffea canephora HOM05D007633 ORTHO05D008817 2.0e-38 163.3 171 49.7
MSTRG.21860 Avicennia marina HOM05D007633 ORTHO05D008817 2.9e-37 159.5 170 46.5
Actinidia36954 Actinidia chinensis HOM05D007633 ORTHO05D008817 1.1e-36 157.5 174 47.1
Rhsim02G0025900 Rhododendron simsii HOM05D007633 ORTHO05D008817 2.7e-35 152.9 175 44.0
Dinv14003 Davidia involucrata HOM05D007633 ORTHO05D008817 6.0e-35 151.8 163 46.6
Medtr5g006410 Medicago truncatula HOM05D007633 ORTHO05D008817 7.8e-35 151.4 172 42.4
Nitab4.5_0001920g0040 Nicotiana tabacum HOM05D007633 ORTHO05D008817 3.9e-34 149.1 124 61.3
FAN02G3335 Fragaria x ananassa HOM05D007633 ORTHO05D008817 1.5e-33 147.1 169 40.2
Eucgr.H03451 Eucalyptus grandis HOM05D007633 ORTHO05D008817 1.9e-33 146.7 158 43.7
Cfa015662 Carpinus fangiana HOM05D007633 ORTHO05D008817 7.3e-33 144.8 169 43.2
FAN22G0362 Fragaria x ananassa HOM05D007633 ORTHO05D008817 1.3e-32 144.1 169 39.6
FvH4_4g16290 Fragaria vesca HOM05D007633 ORTHO05D008817 1.6e-32 143.7 163 39.9
FAN12G0707 Fragaria x ananassa HOM05D007633 ORTHO05D008817 1.6e-32 143.7 163 39.9
Prupe.1G015500 Prunus persica HOM05D007633 ORTHO05D008817 2.1e-32 143.3 163 42.9
Haze_00885 Corylus avellana HOM05D007633 ORTHO05D008817 6.2e-32 141.7 169 42.6
QL06p002095 Quercus lobata HOM05D007633 ORTHO05D008817 6.2e-32 141.7 157 45.9
Ciclev10005651m.g Citrus clementina HOM05D007633 ORTHO05D008817 8.1e-32 141.4 158 42.4
Migut.N00191 Erythranthe guttata HOM05D007633 ORTHO05D008817 1.1e-31 141.0 172 40.7
Glyma.11G006100 Glycine max HOM05D007633 ORTHO05D008817 1.1e-31 141.0 158 43.0
LjContig00408g0001251 Lotus japonicus HOM05D007633 ORTHO05D008817 1.8e-31 140.2 164 40.9
RcHm_v2.0_Chr4g0415951 Rosa chinensis HOM05D007633 ORTHO05D008817 2.4e-31 139.8 158 39.9
Atru.chr4.2449 Acer truncatum HOM05D007633 ORTHO05D008817 3.1e-31 139.4 158 43.0
Potri.008G154200 Populus trichocarpa HOM05D007633 ORTHO05D008817 3.1e-31 139.4 175 44.0
TAR636G0739 Trochodendron aralioides HOM05D007633 ORTHO05D008817 2.0e-30 136.7 157 43.9
MELO3C006526.2 Cucumis melo HOM05D007633 ORTHO05D008817 4.5e-30 135.6 157 43.9
Gohir.A09G053600 Gossypium hirsutum HOM05D007633 ORTHO05D008817 4.5e-30 135.6 160 42.5
HanXRQChr02g0035611 Helianthus annuus HOM05D007633 ORTHO05D008817 9.9e-30 134.4 158 43.7
Psat4g209480 Pisum sativum HOM05D007633 ORTHO05D008817 1.3e-29 134.0 163 41.1
CsaV3_3G013230 Cucumis sativus L. HOM05D007633 ORTHO05D008817 1.7e-29 133.7 157 42.7
Ca_24403_v3 Cicer arietinum L. HOM05D007633 ORTHO05D008817 2.2e-29 133.3 174 39.1
PGR004G0463 Punica granatum HOM05D007633 ORTHO05D008817 3.8e-29 132.5 157 42.0
Aqoxy2G03409 Aquilegia oxysepala HOM05D007633 ORTHO05D008817 1.1e-28 131.0 159 42.8
ECA240G3784 Erigeron canadensis HOM05D000137 ORTHO05D000452 1.4e-28 130.6 163 40.5
TPR.G38043 Trifolium pratense HOM05D007633 ORTHO05D008817 1.4e-28 130.6 163 38.7
Nn1g02349 Nelumbo nucifera HOM05D007633 ORTHO05D008817 2.4e-28 129.8 152 44.7
MD16G1195500 Malus domestica HOM05D007633 ORTHO05D008817 3.2e-28 129.4 161 42.2
Potri.010G086300 Populus trichocarpa HOM05D007633 ORTHO05D008817 3.2e-28 129.4 159 41.5
Sed0010969 Sechium edule HOM05D007633 ORTHO05D008817 4.2e-28 129.0 158 40.5
Gorai.006G055000 Gossypium raimondii HOM05D007633 ORTHO05D008817 7.1e-28 128.3 165 41.8
GSVIVG01017995001 Vitis vinifera HOM05D007633 ORTHO05D008817 1.2e-27 127.5 157 40.8
Gohir.D09G053050 Gossypium hirsutum HOM05D007633 ORTHO05D008817 2.1e-27 126.7 159 42.1
SalBow3G0862 Salvia bowleyana HOM05D007633 ORTHO05D008817 2.1e-27 126.7 168 41.7
Lalb_Chr01g0013131 Lupinus albus HOM05D007633 ORTHO05D008817 2.7e-27 126.3 161 41.0
Sc19g0004060 Simmondsia chinensis HOM05D005574 ORTHO05D007102 2.7e-27 126.3 162 38.3
Sabra10G0057400 Salix brachista HOM05D007633 ORTHO05D008817 6.0e-27 125.2 158 39.2
Duzib212G0599 Durio zibethinus HOM05D007633 ORTHO05D008817 7.9e-27 124.8 160 41.2
Glyma.01G237200 Glycine max HOM05D007633 ORTHO05D008817 7.9e-27 124.8 157 40.1
CANSAT78G1135 Cannabis sativa HOM05D007633 ORTHO05D008817 9.6e-25 117.9 172 34.3
Thecc.04G233700 Theobroma cacao HOM05D007633 ORTHO05D008817 9.6e-25 117.9 172 37.8
vmacro15349 Vaccinium macrocarpon HOM05D007633 ORTHO05D008817 4.8e-24 115.5 178 36.0
Manes.03G177200 Manihot esculenta HOM05D007633 ORTHO05D008817 1.4e-23 114.0 151 38.4
Lsat_1_v5_gn_7_64401 Lactuca sativa HOM05D007633 ORTHO05D008817 2.4e-23 113.2 154 40.9
Hund12119 Selenicereus undatus HOM05D007633 ORTHO05D008817 2.0e-22 110.2 149 35.6
CDE07G1037 Ceratophyllum demersum HOM05D007633 ORTHO05D008817 2.6e-22 109.8 149 41.6
Phvul.002G044600 Phaseolus vulgaris HOM05D007633 ORTHO05D008817 2.6e-22 109.8 176 38.1
PSO761G0330 Papaver somniferum HOM05D007633 ORTHO05D008817 3.4e-22 109.4 158 39.2
VMungo1215G1793 Vigna mungo HOM05D007633 ORTHO05D008817 7.6e-22 108.2 183 36.1
TWI73G0352 Tripterygium wilfordii HOM05D007633 ORTHO05D008817 1.3e-21 107.5 159 34.6
ATR0697G107 Amborella trichopoda HOM05D007633 ORTHO05D008817 1.7e-21 107.1 151 39.7
PSO210G0191 Papaver somniferum HOM05D007633 ORTHO05D008817 8.4e-21 104.8 158 37.3
CiPaw.01G167500 Carya illinoinensis HOM05D007633 ORTHO05D008817 1.9e-20 103.6 167 34.7
PSO210G6592 Papaver somniferum HOM05D007633 ORTHO05D008817 2.5e-20 103.2 161 35.4
Ah.04g154590 Amaranthus hybridus HOM05D007633 ORTHO05D008817 5.5e-20 102.1 151 37.1
PSO761G0485 Papaver somniferum HOM05D007633 ORTHO05D008817 7.1e-20 101.7 161 35.4
AUR62034710 Chenopodium quinoa HOM05D007633 ORTHO05D008817 2.3e-18 96.7 143 35.7
FAN07G1430 Fragaria x ananassa HOM05D007633 ORTHO05D008817 3.0e-18 96.3 103 42.7
HPP92_006116 Vanilla planifolia HOM05D007633 ORTHO05D008817 3.3e-17 92.8 154 36.4
VMungo1215G1192 Vigna mungo HOM05D007633 ORTHO05D008817 4.3e-17 92.4 190 36.3
Lsat_1_v5_gn_8_155361 Lactuca sativa HOM05D007633 ORTHO05D008817 4.8e-16 89.0 114 40.4
ClCG05G005110 Citrullus lanatus HOM05D007633 ORTHO05D008817 7.6e-14 81.6 160 31.2
AT1G05430 Arabidopsis thaliana HOM05D012198 ORTHO05D008817 3.5e-11 72.8 165 33.3
Carub.0001s0476 Capsella rubella HOM05D012198 ORTHO05D008817 3.9e-10 69.3 165 33.3
AL1G15270 Arabidopsis lyrata HOM05D012198 ORTHO05D008817 6.7e-10 68.6 172 33.1
Aa31LG1G19200 Aethionema arabicum HOM05D005574 ORTHO05D007102 5.7e-09 65.5 170 30.6
THA.LOC104826165 Tarenaya hassleriana HOM05D012198 ORTHO05D008817 2.2e-08 63.5 164 28.7
SEGI_17234 Sequoiadendron giganteum HOM05D007633 ORTHO05D008817 4.8e-08 62.4 68 41.2
arahy.Tifrunner.gnm1.ann1.5LNY8Z Arachis hypogaea HOM05D007633 ORTHO05D008817 6.3e-08 62.0 79 38.0
arahy.Tifrunner.gnm1.ann1.VQRK5I Arachis hypogaea HOM05D007633 ORTHO05D008817 6.3e-08 62.0 79 38.0
BcaB02g06861 Brassica carinata HOM05D012198 ORTHO05D008817 1.8e-07 60.5 148 31.1
CARHR205340 Cardamine hirsuta HOM05D012198 ORTHO05D008817 1.8e-07 60.5 170 30.0
Lalb_Chr01g0013111 Lupinus albus HOM05D007633 ORTHO05D008817 3.1e-07 59.7 65 49.2
Sp1g04300 Schrenkiella parvula HOM05D012198 ORTHO05D008817 4.1e-07 59.3 170 30.6
A10p04130 Brassica napus HOM05D012198 ORTHO05D008817 5.3e-07 58.9 148 30.4
BraA10t42683Z Brassica rapa HOM05D012198 ORTHO05D008817 5.3e-07 58.9 148 30.4
BcaC05g24387 Brassica carinata HOM05D012198 ORTHO05D008817 6.9e-07 58.5 147 29.3
Thhalv10008449m.g Eutrema salsugineum HOM05D012198 ORTHO05D008817 6.9e-07 58.5 161 27.3
C05p03770 Brassica napus HOM05D012198 ORTHO05D008817 1.2e-06 57.8 147 29.3
BolC5t29154H Brassica oleracea HOM05D012198 ORTHO05D008817 1.2e-06 57.8 147 29.3
AUR62043551 Chenopodium quinoa HOM05D007633 ORTHO05D008817 2.6e-06 56.6 100 32.0
EL10Ac3g06495 Beta vulgaris HOM05D007633 ORTHO05D008817 4.5e-06 55.8 147 32.0


User provided reference genes

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