Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g018550 Solanum pennellii HOM05D006846 ORTHO05D008473 4.2e-81 304.7 157 100.0
Solyc06g053470.3 Solanum lycopersicum HOM05D006846 ORTHO05D008473 1.6e-80 302.8 157 99.4
PGSC0003DMG400016299 Solanum tuberosum HOM05D006846 ORTHO05D008473 3.9e-79 298.1 155 98.1
Nitab4.5_0007368g0030 Nicotiana tabacum HOM05D006846 ORTHO05D008473 9.3e-65 250.4 158 82.3
Nitab4.5_0007474g0050 Nicotiana tabacum HOM05D006846 ORTHO05D008473 9.3e-65 250.4 158 82.3
CAN.G136.4 Capsicum annuum HOM05D006846 ORTHO05D008473 3.9e-63 245.0 158 85.4
Peaxi162Scf00579g00010 Petunia axillaris HOM05D006846 ORTHO05D008473 1.8e-52 209.5 139 78.4
Eucgr.H04110 Eucalyptus grandis HOM05D006846 ORTHO05D008473 5.7e-46 188.0 142 63.4
Lj6A699T67 Lonicera japonica HOM05D006846 ORTHO05D008473 6.3e-45 184.5 132 68.2
MSTRG.14213 Avicennia marina HOM05D006846 ORTHO05D008473 1.4e-44 183.3 129 69.8
Migut.H02019 Erythranthe guttata HOM05D006846 ORTHO05D008473 1.4e-44 183.3 129 72.9
Hma1.2p1_0013F.1_g007970 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 1.8e-44 183.0 117 75.2
Potri.008G099700 Populus trichocarpa HOM05D006846 ORTHO05D008473 1.8e-44 183.0 159 59.7
Prupe.1G108100 Prunus persica HOM05D006846 ORTHO05D008473 4.1e-44 181.8 127 70.1
QL06p041421 Quercus lobata HOM05D006846 ORTHO05D008473 4.1e-44 181.8 144 62.5
Actinidia18502 Actinidia chinensis HOM05D006846 ORTHO05D008473 5.3e-44 181.4 153 62.7
Ciclev10007018m.g Citrus clementina HOM05D006846 ORTHO05D008473 5.3e-44 181.4 118 75.4
MELO3C003207.2 Cucumis melo HOM05D006846 ORTHO05D008473 6.9e-44 181.0 152 61.2
Hund16859 Selenicereus undatus HOM05D006846 ORTHO05D008473 6.9e-44 181.0 116 72.4
CsaV3_4G025810 Cucumis sativus L. HOM05D006846 ORTHO05D008473 9.1e-44 180.6 152 59.9
GSVIVG01017604001 Vitis vinifera HOM05D006846 ORTHO05D008473 9.1e-44 180.6 127 70.9
GSVIVG01017661001 Vitis vinifera HOM05D006846 ORTHO05D008473 9.1e-44 180.6 127 70.9
Thecc.04G310600 Theobroma cacao HOM05D006846 ORTHO05D008473 4.5e-43 178.3 145 62.8
Gohir.D09G242700 Gossypium hirsutum HOM05D006846 ORTHO05D008473 7.7e-43 177.6 165 58.2
Gorai.006G266400 Gossypium raimondii HOM05D006846 ORTHO05D008473 7.7e-43 177.6 165 58.2
SGA_v2.0_scaffold127G34033 Striga asiatica HOM05D006846 ORTHO05D008473 7.7e-43 177.6 139 61.2
Duzib212G0339 Durio zibethinus HOM05D006846 ORTHO05D008473 1.3e-42 176.8 123 70.7
Sed0003831 Sechium edule HOM05D006846 ORTHO05D008473 2.2e-42 176.0 126 67.5
Carub.0001s3726 Capsella rubella HOM05D003832 ORTHO05D004365 2.9e-42 175.6 144 59.7
CiPaw.01G161800 Carya illinoinensis HOM05D006846 ORTHO05D008473 2.9e-42 175.6 136 64.7
THA.LOC104821808 Tarenaya hassleriana HOM05D006846 ORTHO05D008473 2.9e-42 175.6 120 68.3
MD13G1143600 Malus domestica HOM05D006846 ORTHO05D008473 5.0e-42 174.9 130 68.5
PGR004G1594 Punica granatum HOM05D006846 ORTHO05D008473 8.5e-42 174.1 121 71.1
PGR033G0007 Punica granatum HOM05D006846 ORTHO05D008473 8.5e-42 174.1 121 71.1
Sabra08G0075400 Salix brachista HOM05D006846 ORTHO05D008473 8.5e-42 174.1 167 56.9
Carub.0005s0005 Capsella rubella HOM05D006846 ORTHO05D008473 1.9e-41 172.9 144 59.0
Sc23g0000700 Simmondsia chinensis HOM05D006846 ORTHO05D008473 2.5e-41 172.6 140 60.0
Rhsim04G0247300 Rhododendron simsii HOM05D006846 ORTHO05D008473 4.2e-41 171.8 156 60.9
ECA233G5003 Erigeron canadensis HOM05D006846 ORTHO05D008473 5.5e-41 171.4 141 63.1
Manes.03G210800 Manihot esculenta HOM05D006846 ORTHO05D008473 5.5e-41 171.4 136 64.7
Medtr2g046100 Medicago truncatula HOM05D006846 ORTHO05D008473 5.5e-41 171.4 135 61.5
FvH4_4g21260 Fragaria vesca HOM05D006846 ORTHO05D008473 9.4e-41 170.6 123 70.7
FAN07G1325 Fragaria x ananassa HOM05D006846 ORTHO05D008473 9.4e-41 170.6 155 60.0
AL1G54740 Arabidopsis lyrata HOM05D006846 ORTHO05D008473 1.2e-40 170.2 142 60.6
BcaC08g43012 Brassica carinata HOM05D006846 ORTHO05D008473 1.2e-40 170.2 144 59.7
C06p02670 Brassica napus HOM05D006846 ORTHO05D008473 1.2e-40 170.2 144 59.7
AT1G48170 Arabidopsis thaliana HOM05D006846 ORTHO05D008473 2.1e-40 169.5 144 59.7
Os12g0182800 Oryza sativa ssp. japonica HOM05D006846 ORTHO05D008473 2.1e-40 169.5 127 65.4
Sp3g23740 Schrenkiella parvula HOM05D006846 ORTHO05D008473 2.1e-40 169.5 141 61.7
BolC6t35393H Brassica oleracea HOM05D006846 ORTHO05D008473 2.7e-40 169.1 144 59.0
Lj6g0016026 Lotus japonicus HOM05D006846 ORTHO05D008473 2.7e-40 169.1 137 62.8
A06p04640 Brassica napus HOM05D006846 ORTHO05D008473 4.7e-40 168.3 144 57.6
BraA06t23668Z Brassica rapa HOM05D006846 ORTHO05D008473 4.7e-40 168.3 144 57.6
Thhalv10012405m.g Eutrema salsugineum HOM05D006846 ORTHO05D008473 4.7e-40 168.3 148 58.8
BcaB07g33786 Brassica carinata HOM05D006846 ORTHO05D008473 6.1e-40 167.9 148 58.8
CARHR037810 Cardamine hirsuta HOM05D006846 ORTHO05D008473 7.9e-40 167.5 129 63.6
CANSAT01G2167 Cannabis sativa HOM05D006846 ORTHO05D008473 1.4e-39 166.8 132 66.7
PSO339G5299 Papaver somniferum HOM05D006846 ORTHO05D008473 1.4e-39 166.8 124 63.7
SGA_v2.0_scaffold64G22040 Striga asiatica HOM05D006846 ORTHO05D008473 1.4e-39 166.8 160 54.4
RcHm_v2.0_Chr4g0426881 Rosa chinensis HOM05D006846 ORTHO05D008473 1.8e-39 166.4 124 66.9
CARHR290870 Cardamine hirsuta HOM05D006846 ORTHO05D008473 3.0e-39 165.6 116 67.2
Dinv29523 Davidia involucrata HOM05D006846 ORTHO05D008473 5.2e-39 164.9 104 77.9
vmacro08003 Vaccinium macrocarpon HOM05D006846 ORTHO05D008473 5.2e-39 164.9 197 47.7
AUR62019042 Chenopodium quinoa HOM05D006846 ORTHO05D008473 8.8e-39 164.1 116 63.8
SEGI_09291 Sequoiadendron giganteum HOM05D006846 ORTHO05D008473 1.5e-38 163.3 150 56.0
PSO384G1587 Papaver somniferum HOM05D006846 ORTHO05D008473 2.6e-38 162.5 119 65.5
Psat1g017720 Pisum sativum HOM05D006846 ORTHO05D008473 2.6e-38 162.5 133 61.7
Cfa015953 Carpinus fangiana HOM05D006846 ORTHO05D008473 3.3e-38 162.2 130 63.1
Phvul.009G219800 Phaseolus vulgaris HOM05D006846 ORTHO05D008473 3.3e-38 162.2 121 66.1
SGA_v2.0_scaffold127G34034 Striga asiatica HOM05D006846 ORTHO05D008473 3.3e-38 162.2 150 57.3
AUR62027881 Chenopodium quinoa HOM05D006846 ORTHO05D008473 4.4e-38 161.8 116 63.8
VMungo1309G3101 Vigna mungo HOM05D006846 ORTHO05D008473 4.4e-38 161.8 139 60.4
EL10Ac1g01060 Beta vulgaris HOM05D006846 ORTHO05D008473 5.7e-38 161.4 135 60.0
Ca_02363_v3 Cicer arietinum L. HOM05D006846 ORTHO05D008473 5.7e-38 161.4 128 63.3
Lalb_Chr07g0181811 Lupinus albus HOM05D006846 ORTHO05D008473 9.7e-38 160.6 129 61.2
TWI73G0996 Tripterygium wilfordii HOM05D006846 ORTHO05D008473 9.7e-38 160.6 127 68.5
Aqoxy1G00358 Aquilegia oxysepala HOM05D006846 ORTHO05D008473 1.3e-37 160.2 141 61.7
Glyma.15G188800 Glycine max HOM05D006846 ORTHO05D008473 1.3e-37 160.2 140 59.3
HanXRQChr09g0246471 Helianthus annuus HOM05D006846 ORTHO05D008473 1.7e-37 159.8 150 59.3
arahy.Tifrunner.gnm1.ann1.BIT0EB Arachis hypogaea HOM05D006846 ORTHO05D008473 2.2e-37 159.5 113 66.4
Aa31LG10G5560 Aethionema arabicum HOM05D006846 ORTHO05D008473 2.8e-37 159.1 141 58.2
FAN12G0803 Fragaria x ananassa HOM05D006846 ORTHO05D008473 3.7e-37 158.7 148 58.8
MBI11_g10320_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 4.8e-37 158.3 128 61.7
Zm00001eb359370 Zea mays HOM05D006846 ORTHO05D008473 6.3e-37 157.9 155 53.5
CDE12G0609 Ceratophyllum demersum HOM05D006846 ORTHO05D008473 4.5e-35 151.8 120 60.0
Cc03_g00240 Coffea canephora HOM05D006846 ORTHO05D008473 6.5e-34 147.9 96 77.1
COL.COLO4_34545 Corchorus olitorius HOM05D005582 ORTHO05D007028 6.5e-34 147.9 93 75.3
SalBow8G5328 Salvia bowleyana HOM05D006846 ORTHO05D008473 8.5e-34 147.5 138 59.4
unitig_744.g24645 Utricularia gibba HOM05D006846 ORTHO05D008473 1.5e-33 146.7 116 65.5
Pp3c9_17660 Physcomitrium patens HOM05D006846 ORTHO05D008473 2.7e-32 142.5 129 53.5
TPR.G27493 Trifolium pratense HOM05D006846 ORTHO05D008473 6.7e-31 137.9 110 58.2
MD16G1146600 Malus domestica HOM05D006846 ORTHO05D008473 4.4e-30 135.2 126 56.3
Dinv29521 Davidia involucrata HOM05D006846 ORTHO05D008473 2.4e-28 129.4 102 65.7
Mapoly0021s0070 Marchantia polymorpha HOM05D006846 ORTHO05D008473 4.1e-28 128.6 117 51.3
Haze_00535 Corylus avellana HOM05D006846 ORTHO05D008473 9.1e-28 127.5 130 54.6
Haze_00536 Corylus avellana HOM05D006846 ORTHO05D008473 2.0e-27 126.3 130 54.6
HPP92_004479 Vanilla planifolia HOM05D006846 ORTHO05D008473 2.7e-27 125.9 121 55.4
QL11p040346 Quercus lobata HOM05D006846 ORTHO05D008473 5.9e-27 124.8 129 52.7
Gohir.A09G242000 Gossypium hirsutum HOM05D006846 ORTHO05D008473 1.3e-26 123.6 165 46.1
Lsat_1_v5_gn_6_71441 Lactuca sativa HOM05D006846 ORTHO05D008473 2.5e-25 119.4 113 56.6
Nn4g26496 Nelumbo nucifera HOM05D006846 ORTHO05D008473 2.5e-25 119.4 123 52.0
TAR365G0638 Trochodendron aralioides HOM05D006846 ORTHO05D008473 2.7e-24 115.9 73 74.0
arahy.Tifrunner.gnm1.ann1.EYUN0W Arachis hypogaea HOM05D000385 ORTHO05D000269 5.2e-23 111.7 116 50.0
MBI18_g09611_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 5.2e-23 111.7 104 53.8
CSS0050245 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 1.5e-22 110.2 102 55.9
ATR0693G432 Amborella trichopoda HOM05D006846 ORTHO05D008473 3.7e-21 105.5 75 68.0
ClCG04G007450 Citrullus lanatus HOM05D006846 ORTHO05D008473 1.0e-18 97.4 76 65.8
Glyma.09G078800 Glycine max HOM05D006846 ORTHO05D008473 1.9e-17 93.2 69 69.6
CSS0047848 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 2.8e-16 89.4 53 81.1
Hma1.2p1_0013F.1_g007960 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 3.6e-16 89.0 53 73.6
Cpa.g.sc146.38 Carica papaya HOM05D006846 ORTHO05D008473 2.6e-14 82.8 48 79.2
Zm00001eb158200 Zea mays HOM05D006846 ORTHO05D008473 2.0e-11 73.2 70 50.0
Cre04.g216300 Chlamydomonas reinhardtii HOM05D006846 ORTHO05D008473 1.3e-10 70.5 117 35.0
MBI19_g16347_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 1.1e-09 67.4 96 44.8
AagrBONN_evm.TU.Sc2ySwM_117.777 Anthoceros agrestis HOM05D006846 ORTHO05D008473 4.7e-08 62.0 55 45.5
Dinv18032 Davidia involucrata HOM05D006846 ORTHO05D008473 4.0e-07 58.9 75 48.0
Thecc.01G162200 Theobroma cacao HOM05D006846 ORTHO05D008473 4.0e-07 58.9 80 47.5


User provided reference genes

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