Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g017690 Solanum pennellii HOM05D007648 ORTHO05D009613 1.2e-36 156.0 80 100.0
PGSC0003DMG400023820 Solanum tuberosum HOM05D007648 ORTHO05D009613 2.7e-36 154.8 80 98.8
CAN.G22.4 Capsicum annuum HOM05D007648 ORTHO05D009613 4.3e-34 147.5 80 92.5
CAN.G22.7 Capsicum annuum HOM05D007648 ORTHO05D009613 5.9e-31 137.1 80 86.2
SalBow7G1731 Salvia bowleyana HOM05D007648 ORTHO05D009613 7.9e-28 126.7 80 80.0
Lj5g0008894 Lotus japonicus HOM05D007648 ORTHO05D009613 6.7e-27 123.6 78 76.9
Psat6g001120 Pisum sativum HOM05D007648 ORTHO05D009613 1.1e-26 122.9 78 74.4
GSVIVG01008741001 Vitis vinifera HOM05D007648 ORTHO05D009613 1.1e-26 122.9 80 75.0
Sabra14G0141300 Salix brachista HOM05D000525 ORTHO05D001368 1.5e-26 122.5 79 74.7
Dinv31891 Davidia involucrata HOM05D007648 ORTHO05D009613 2.0e-26 122.1 79 74.7
Potri.014G181400 Populus trichocarpa HOM05D007648 ORTHO05D009613 2.0e-26 122.1 79 74.7
CiPaw.07G143700 Carya illinoinensis HOM05D007648 ORTHO05D009613 2.5e-26 121.7 80 73.8
Glyma.17G261200 Glycine max HOM05D007648 ORTHO05D009613 7.4e-26 120.2 77 75.3
Lalb_Chr19g0131601 Lupinus albus HOM05D007648 ORTHO05D009613 9.7e-26 119.8 78 75.6
TAR625G0376 Trochodendron aralioides HOM05D007648 ORTHO05D009613 1.3e-25 119.4 80 72.5
arahy.Tifrunner.gnm1.ann1.8I3IQY Arachis hypogaea HOM05D007648 ORTHO05D009613 1.7e-25 119.0 80 75.0
arahy.Tifrunner.gnm1.ann1.EILY3I Arachis hypogaea HOM05D007648 ORTHO05D009613 2.2e-25 118.6 78 76.9
Ca_13484_v3 Cicer arietinum L. HOM05D007648 ORTHO05D009613 2.2e-25 118.6 78 71.8
QL02p012929 Quercus lobata HOM05D007648 ORTHO05D009613 2.2e-25 118.6 79 73.4
Eucgr.F03708 Eucalyptus grandis HOM05D007648 ORTHO05D009613 2.8e-25 118.2 79 74.7
Medtr1g026100 Medicago truncatula HOM05D007648 ORTHO05D009613 2.8e-25 118.2 78 71.8
Prupe.1G359500 Prunus persica HOM05D007648 ORTHO05D009613 3.7e-25 117.9 79 70.9
Rhsim07G0248300 Rhododendron simsii HOM05D007648 ORTHO05D009613 3.7e-25 117.9 80 73.8
Migut.C00899 Erythranthe guttata HOM05D007648 ORTHO05D009613 6.3e-25 117.1 79 73.4
Haze_22702 Corylus avellana HOM05D007648 ORTHO05D009613 1.1e-24 116.3 78 73.1
Phvul.001G002600 Phaseolus vulgaris HOM05D007648 ORTHO05D009613 1.1e-24 116.3 79 73.4
ClCG05G015420 Citrullus lanatus HOM05D007648 ORTHO05D009613 1.4e-24 115.9 79 67.1
TWI12G0541 Tripterygium wilfordii HOM05D007648 ORTHO05D009613 1.4e-24 115.9 78 70.5
Hund05152 Selenicereus undatus HOM05D000399 ORTHO05D000304 1.8e-24 115.5 74 71.6
CSS0030217 Camellia sinensis var. sinensis HOM05D007648 ORTHO05D009613 2.4e-24 115.2 80 71.2
THA.LOC104811443 Tarenaya hassleriana HOM05D007648 ORTHO05D009613 2.4e-24 115.2 79 70.9
VMungo0647G0751 Vigna mungo HOM05D007648 ORTHO05D009613 2.4e-24 115.2 75 76.0
Phvul.001G002300 Phaseolus vulgaris HOM05D007648 ORTHO05D009613 3.1e-24 114.8 78 73.1
RcHm_v2.0_Chr6g0303661 Rosa chinensis HOM05D007648 ORTHO05D009613 3.1e-24 114.8 79 68.4
FvH4_2g37960 Fragaria vesca HOM05D007648 ORTHO05D009613 5.3e-24 114.0 79 68.4
MD15G1006800 Malus domestica HOM05D007648 ORTHO05D009613 5.3e-24 114.0 79 68.4
Aqoxy5G01099 Aquilegia oxysepala HOM05D007648 ORTHO05D009613 6.9e-24 113.6 78 74.4
BraA08t32933Z Brassica rapa HOM05D007648 ORTHO05D009613 6.9e-24 113.6 79 68.4
MD08G1007600 Malus domestica HOM05D007648 ORTHO05D009613 6.9e-24 113.6 79 69.6
Manes.05G142600 Manihot esculenta HOM05D007648 ORTHO05D009613 6.9e-24 113.6 82 70.7
Thecc.08G051700 Theobroma cacao HOM05D007648 ORTHO05D009613 6.9e-24 113.6 79 69.6
Cc10_g01140 Coffea canephora HOM05D007648 ORTHO05D009613 9.1e-24 113.2 78 71.8
DCAR_021446 Daucus carota HOM05D007648 ORTHO05D009613 9.1e-24 113.2 79 70.9
Nitab4.5_0004193g0030 Nicotiana tabacum HOM05D000998 ORTHO05D000806 9.1e-24 113.2 68 83.8
Peaxi162Scf00394g00212 Petunia axillaris HOM05D007648 ORTHO05D009613 9.1e-24 113.2 67 86.6
Carub.0002s2295 Capsella rubella HOM05D007648 ORTHO05D009613 1.2e-23 112.8 79 67.1
CARHR069590 Cardamine hirsuta HOM05D007648 ORTHO05D009613 1.2e-23 112.8 79 67.1
Lsat_1_v5_gn_5_1580 Lactuca sativa HOM05D007648 ORTHO05D009613 1.2e-23 112.8 80 65.0
COL.COLO4_26084 Corchorus olitorius HOM05D007648 ORTHO05D009613 1.5e-23 112.5 79 69.6
ECA238G3742 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-23 112.5 73 72.6
Rhsim07G0248100 Rhododendron simsii HOM05D007648 ORTHO05D009613 1.5e-23 112.5 76 75.0
AT1G76065 Arabidopsis thaliana HOM05D007648 ORTHO05D009613 2.6e-23 111.7 78 66.7
A08p09340 Brassica napus HOM05D007648 ORTHO05D009613 3.4e-23 111.3 79 67.1
BolC8t48002H Brassica oleracea HOM05D007648 ORTHO05D009613 3.4e-23 111.3 79 67.1
FAN15G0474 Fragaria x ananassa HOM05D007648 ORTHO05D009613 3.4e-23 111.3 79 67.1
Actinidia29767 Actinidia chinensis HOM05D007648 ORTHO05D009613 4.5e-23 110.9 79 70.9
Duzib093G2040 Durio zibethinus HOM05D007648 ORTHO05D009613 4.5e-23 110.9 80 68.8
vmacro17151 Vaccinium macrocarpon HOM05D007648 ORTHO05D009613 4.5e-23 110.9 80 70.0
Sed0006121 Sechium edule HOM05D007648 ORTHO05D009613 5.9e-23 110.5 80 65.0
BcaB07g30075 Brassica carinata HOM05D007648 ORTHO05D009613 1.0e-22 109.8 79 67.1
BcaC07g37632 Brassica carinata HOM05D007648 ORTHO05D009613 1.0e-22 109.8 79 65.8
FAN20G1741 Fragaria x ananassa HOM05D007648 ORTHO05D009613 1.3e-22 109.4 79 65.8
Sc02g0008880 Simmondsia chinensis HOM05D007648 ORTHO05D009613 2.2e-22 108.6 80 65.0
Ciclev10003012m.g Citrus clementina HOM05D007648 ORTHO05D009613 2.9e-22 108.2 80 63.8
AL2G36100 Arabidopsis lyrata HOM05D007648 ORTHO05D009613 3.8e-22 107.8 78 62.8
BraA02t08664Z Brassica rapa HOM05D007648 ORTHO05D009613 3.8e-22 107.8 75 66.7
Thhalv10019391m.g Eutrema salsugineum HOM05D007648 ORTHO05D009613 5.0e-22 107.5 79 64.6
Nitab4.5_0000716g0050 Nicotiana tabacum HOM05D000998 ORTHO05D000806 6.5e-22 107.1 63 85.7
HanXRQChr06g0185111 Helianthus annuus HOM05D007648 ORTHO05D009613 1.1e-21 106.3 80 63.8
Sc02g0008840 Simmondsia chinensis HOM05D007648 ORTHO05D009613 1.1e-21 106.3 80 63.8
Aa31LG4G6180 Aethionema arabicum HOM05D007648 ORTHO05D009613 1.9e-21 105.5 77 64.9
HPP92_003481 Vanilla planifolia HOM05D007648 ORTHO05D009613 1.9e-21 105.5 78 62.8
PSO210G3155 Papaver somniferum HOM05D007648 ORTHO05D009613 2.5e-21 105.1 75 66.7
MELO3C003728.2 Cucumis melo HOM05D007648 ORTHO05D009613 4.2e-21 104.4 76 64.5
CsaV3_3G046120 Cucumis sativus L. HOM05D007648 ORTHO05D009613 5.5e-21 104.0 76 64.5
HPP92_026879 Vanilla planifolia HOM05D007648 ORTHO05D009613 7.2e-21 103.6 78 62.8
Ah.00g000660 Amaranthus hybridus HOM05D007648 ORTHO05D009613 9.4e-21 103.2 78 62.8
Atru.chr13.217 Acer truncatum HOM05D007648 ORTHO05D009613 1.2e-20 102.8 78 65.4
Gohir.D01G035600 Gossypium hirsutum HOM05D007648 ORTHO05D009613 2.1e-20 102.1 77 63.6
CDE04G2628 Ceratophyllum demersum HOM05D007648 ORTHO05D009613 2.7e-20 101.7 76 65.8
Gorai.002G043700 Gossypium raimondii HOM05D007648 ORTHO05D009613 2.7e-20 101.7 77 63.6
EL10Ac1g02083 Beta vulgaris HOM05D000399 ORTHO05D000304 3.6e-20 101.3 76 65.8
Gohir.A01G044700 Gossypium hirsutum HOM05D007648 ORTHO05D009613 4.7e-20 100.9 77 62.3
Os02g0667000 Oryza sativa ssp. japonica HOM05D007648 ORTHO05D009613 1.0e-19 99.8 77 61.0
BolC2t11627H Brassica oleracea HOM05D007648 ORTHO05D009613 1.5e-18 95.9 79 62.0
MBI05_g46751_MAGBIO Magnolia biondii HOM05D007648 ORTHO05D009613 2.8e-17 91.7 73 64.4
A02p36690 Brassica napus HOM05D007648 ORTHO05D009613 4.1e-16 87.8 61 65.6
Mapoly0088s0028 Marchantia polymorpha HOM05D007648 ORTHO05D009613 5.9e-15 84.0 77 53.2
C02p55750 Brassica napus HOM05D007648 ORTHO05D009613 1.3e-14 82.8 67 58.2
AUR62036713 Chenopodium quinoa HOM05D000399 ORTHO05D000304 4.2e-13 77.8 132 37.9
SalBow1G6040 Salvia bowleyana HOM05D038733 ORTHO05D009613 9.4e-13 76.6 51 72.5
SalBow7G3523 Salvia bowleyana HOM05D038733 ORTHO05D009613 9.4e-13 76.6 51 72.5
AagrBONN_evm.TU.Sc2ySwM_344.3278 Anthoceros agrestis HOM05D007648 ORTHO05D009613 6.1e-12 73.9 75 49.3
Pp3c8_20950 Physcomitrium patens HOM05D007648 ORTHO05D009613 1.0e-11 73.2 77 48.1
unitig_748.g7721 Utricularia gibba HOM05D007648 ORTHO05D009613 1.0e-11 73.2 60 58.3
AUR62013884 Chenopodium quinoa HOM05D007648 ORTHO05D009613 2.0e-10 68.9 44 72.7
Os03g0159800 Oryza sativa ssp. japonica HOM05D007648 ORTHO05D009613 1.8e-08 62.4 45 60.0
Actinidia37950 Actinidia chinensis HOM05D007648 ORTHO05D009613 9.1e-08 60.1 39 71.8
BcaC03g17585 Brassica carinata HOM05D007648 ORTHO05D009613 6.5e-06 53.9 77 41.6


User provided reference genes

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