Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g016400 Solanum pennellii HOM05D007930 ORTHO05D007166 4.2e-180 634.8 377 100.0
Sopen12g018140 Solanum pennellii HOM05D007930 ORTHO05D007166 3.5e-65 253.1 377 43.5
Sopen04g018890 Solanum pennellii HOM05D007930 ORTHO05D007166 1.2e-62 244.6 190 71.6
Sopen07g008330 Solanum pennellii HOM05D007930 ORTHO05D007166 6.7e-61 238.8 190 70.0
Sopen10g014360 Solanum pennellii HOM05D007930 ORTHO05D007166 8.5e-56 221.9 345 42.3
Sopen07g016830 Solanum pennellii HOM05D007930 ORTHO05D007166 2.7e-54 216.9 334 44.0
Sopen05g026070 Solanum pennellii HOM05D007930 ORTHO05D007166 2.3e-53 213.8 164 68.3
Sopen08g008350 Solanum pennellii HOM05D007930 ORTHO05D007166 4.0e-53 213.0 341 42.2
Sopen06g013750 Solanum pennellii HOM05D007930 ORTHO05D007166 1.5e-52 211.1 159 69.8
Sopen10g009350 Solanum pennellii HOM05D007930 ORTHO05D007166 2.6e-52 210.3 164 67.1
Sopen01g016030 Solanum pennellii HOM05D000014 ORTHO05D000016 7.5e-52 208.8 164 66.5
Sopen00g009310 Solanum pennellii HOM05D007930 ORTHO05D007166 3.1e-50 203.4 164 69.5
Sopen08g011060 Solanum pennellii HOM05D007930 ORTHO05D007166 7.7e-49 198.7 356 39.3
Sopen05g019850 Solanum pennellii HOM05D007930 ORTHO05D007166 2.2e-48 197.2 151 68.9
Sopen08g009350 Solanum pennellii HOM05D007930 ORTHO05D007166 8.5e-48 195.3 147 70.1
Sopen11g018950 Solanum pennellii HOM05D000107 ORTHO05D000062 1.9e-47 194.1 147 70.1
Sopen08g014940 Solanum pennellii HOM05D000004 ORTHO05D007166 3.2e-47 193.4 334 43.4
Sopen11g021520 Solanum pennellii HOM05D007930 ORTHO05D007166 3.2e-47 193.4 326 41.7
PGSC0003DMG400041847 Solanum tuberosum HOM05D007930 ORTHO05D007166 4.2e-47 193.0 184 60.9
Sopen04g019100 Solanum pennellii HOM05D007930 ORTHO05D007166 1.6e-46 191.0 164 64.0
Sopen08g007710 Solanum pennellii HOM05D007930 ORTHO05D007166 3.6e-46 189.9 151 65.6
PGSC0003DMG400004241 Solanum tuberosum HOM05D007930 ORTHO05D007166 3.6e-46 189.9 149 68.5
Sopen10g018630 Solanum pennellii HOM05D007930 ORTHO05D007166 4.7e-46 189.5 160 71.2
Sopen01g007980 Solanum pennellii HOM05D007930 ORTHO05D007166 6.1e-46 189.1 142 69.7
PGSC0003DMG400046611 Solanum tuberosum HOM05D007930 ORTHO05D007166 1.4e-45 188.0 309 43.0
Sopen05g024480 Solanum pennellii HOM05D007930 ORTHO05D007166 4.0e-45 186.4 326 41.4
Sopen02g001050 Solanum pennellii HOM05D007930 ORTHO05D007166 8.8e-45 185.3 151 70.9
Sopen03g018540 Solanum pennellii HOM05D007930 ORTHO05D007166 2.0e-41 174.1 131 70.2
Sopen03g013860 Solanum pennellii HOM05D000004 ORTHO05D007166 3.5e-41 173.3 151 69.5
Sopen09g008030 Solanum pennellii HOM05D007930 ORTHO05D007166 3.5e-41 173.3 141 71.6
Sopen05g025930 Solanum pennellii HOM05D007930 ORTHO05D007166 1.0e-40 171.8 150 63.3
PGSC0003DMG400043538 Solanum tuberosum HOM05D007930 ORTHO05D007166 6.6e-40 169.1 318 39.0
Sopen03g014010 Solanum pennellii HOM05D000014 ORTHO05D000016 2.0e-36 157.5 389 33.2
Sopen02g002760 Solanum pennellii HOM05D007930 ORTHO05D007166 1.3e-35 154.8 103 76.7
Sopen04g011930 Solanum pennellii HOM05D007930 ORTHO05D007166 8.3e-35 152.1 93 79.6
Sopen09g024560 Solanum pennellii HOM05D000107 ORTHO05D000062 1.1e-34 151.8 364 38.5
Sopen08g014730 Solanum pennellii HOM05D007930 ORTHO05D007166 1.8e-34 151.0 282 39.0
Sopen02g002790 Solanum pennellii HOM05D007930 ORTHO05D007166 5.9e-33 146.0 97 75.3
Sopen07g010120 Solanum pennellii HOM05D000014 ORTHO05D000016 1.3e-32 144.8 115 66.1
Sopen11g012950 Solanum pennellii HOM05D007930 ORTHO05D007166 2.3e-32 144.1 117 65.0
PGSC0003DMG400044598 Solanum tuberosum HOM05D007930 ORTHO05D007166 8.6e-32 142.1 86 84.9
PGSC0003DMG400042507 Solanum tuberosum HOM05D007930 ORTHO05D007166 1.5e-31 141.4 116 66.4
PGSC0003DMG400045026 Solanum tuberosum HOM05D007930 ORTHO05D007166 5.2e-29 132.9 326 34.0
Lj1g0024910 Lotus japonicus HOM05D004615 ORTHO05D007166 2.2e-27 127.5 190 41.6
PGSC0003DMG400009722 Solanum tuberosum HOM05D007930 ORTHO05D007166 1.4e-26 124.8 78 80.8
Sopen03g016440 Solanum pennellii HOM05D007930 ORTHO05D007166 1.2e-25 121.7 263 34.6
Phvul.L001738 Phaseolus vulgaris HOM05D008859 ORTHO05D007166 2.0e-25 120.9 204 37.3
Sopen12g016200 Solanum pennellii HOM05D007930 ORTHO05D007166 7.8e-25 119.0 104 69.2
Lj2g0009854 Lotus japonicus HOM05D008859 ORTHO05D007166 1.3e-24 118.2 234 33.3
Sopen12g015810 Solanum pennellii HOM05D007930 ORTHO05D007166 1.3e-24 118.2 369 30.6
Sopen07g010680 Solanum pennellii HOM05D007930 ORTHO05D007166 1.7e-24 117.9 333 33.6
TPR.G25563 Trifolium pratense HOM05D000107 ORTHO05D000062 6.6e-24 115.9 192 38.5
Sopen01g024790 Solanum pennellii HOM05D007930 ORTHO05D007166 1.1e-23 115.2 299 35.1
Psat5g236880 Pisum sativum HOM05D008859 ORTHO05D007166 9.5e-23 112.1 208 33.7
Psat7g204000 Pisum sativum HOM05D008859 ORTHO05D007166 9.5e-23 112.1 208 33.7
Psat5g082960 Pisum sativum HOM05D008859 ORTHO05D007166 2.1e-22 110.9 124 46.0
Sopen01g009500 Solanum pennellii HOM05D007930 ORTHO05D007166 2.1e-22 110.9 116 54.3
Sopen01g021020 Solanum pennellii HOM05D000107 ORTHO05D009932 3.6e-22 110.2 105 57.1
TPR.G7595 Trifolium pratense HOM05D008859 ORTHO05D007166 3.6e-22 110.2 129 47.3
Psat3g052720 Pisum sativum HOM05D009811 ORTHO05D007166 6.2e-22 109.4 194 37.1
Sopen04g019050 Solanum pennellii HOM05D000004 ORTHO05D000002 8.1e-22 109.0 69 76.8
Lj3g0027022 Lotus japonicus HOM05D004615 ORTHO05D000385 2.3e-21 107.5 129 43.4
Sopen08g007420 Solanum pennellii HOM05D007930 ORTHO05D007166 4.0e-21 106.7 234 35.0
Ca_13632_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 6.8e-21 105.9 126 46.0
PGSC0003DMG400046823 Solanum tuberosum HOM05D007930 ORTHO05D007166 8.9e-21 105.5 63 84.1
Psat3g053800 Pisum sativum HOM05D009811 ORTHO05D007166 9.8e-20 102.1 179 38.0
Ca_22878_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 4.9e-19 99.8 186 34.9
PGSC0003DMG400038760 Solanum tuberosum HOM05D007930 ORTHO05D007166 1.4e-18 98.2 66 72.7
PGSC0003DMG400044440 Solanum tuberosum HOM05D007930 ORTHO05D007166 7.1e-18 95.9 158 42.4
Psat4g079480 Pisum sativum HOM05D009811 ORTHO05D007166 6.0e-17 92.8 164 36.6
Sopen12g025620 Solanum pennellii HOM05D007930 ORTHO05D012342 5.1e-16 89.7 55 78.2
Psat5g270240 Pisum sativum HOM05D008859 ORTHO05D007166 1.5e-15 88.2 220 30.9
Lj2g0010843 Lotus japonicus HOM05D004615 ORTHO05D000385 4.3e-15 86.7 102 44.1
Psat7g163400 Pisum sativum HOM05D008859 ORTHO05D007166 4.3e-15 86.7 174 32.8
Ca_14008_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 1.2e-14 85.1 110 40.9
PGSC0003DMG400046364 Solanum tuberosum HOM05D007930 ORTHO05D007166 2.1e-14 84.3 132 47.7
Psat7g230640 Pisum sativum HOM05D008859 ORTHO05D007166 2.8e-14 84.0 112 42.0
PGSC0003DMG400047111 Solanum tuberosum HOM05D007930 ORTHO05D007166 2.8e-14 84.0 85 52.9
Ca_03071_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 1.4e-13 81.6 100 42.0
PGSC0003DMG400014072 Solanum tuberosum HOM05D007930 ORTHO05D007166 1.8e-13 81.3 213 32.4
Ca_05541_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 4.0e-13 80.1 100 42.0
arahy.Tifrunner.gnm1.ann1.AC3I93 Arachis hypogaea HOM05D007930 ORTHO05D011783 5.8e-12 76.3 165 30.9
PGSC0003DMG400045641 Solanum tuberosum HOM05D007930 ORTHO05D007166 4.9e-11 73.2 50 72.0
Sopen11g023140 Solanum pennellii HOM05D000107 ORTHO05D000062 1.4e-10 71.6 205 31.2
PGSC0003DMG400045984 Solanum tuberosum HOM05D007930 ORTHO05D007166 1.9e-10 71.2 63 57.1
Lj4g0021021 Lotus japonicus HOM05D004615 ORTHO05D000385 3.2e-10 70.5 70 45.7
Lj3g0009883 Lotus japonicus HOM05D008859 ORTHO05D007166 5.4e-10 69.7 101 37.6
Sopen01g021130 Solanum pennellii HOM05D007930 ORTHO05D007166 7.1e-10 69.3 83 45.8
PGSC0003DMG400042050 Solanum tuberosum HOM05D007930 ORTHO05D007166 9.2e-10 68.9 63 57.1
Sopen01g007080 Solanum pennellii HOM05D007930 ORTHO05D000062 1.2e-09 68.6 63 55.6
Psat0s1330g0160 Pisum sativum HOM05D009811 ORTHO05D007166 2.7e-09 67.4 85 47.1
PGSC0003DMG400036502 Solanum tuberosum HOM05D007930 ORTHO05D007166 2.7e-09 67.4 63 55.6
Medtr6g043310 Medicago truncatula HOM05D008859 ORTHO05D007166 4.6e-09 66.6 126 42.9
Phvul.010G109450 Phaseolus vulgaris HOM05D008859 ORTHO05D007166 4.6e-09 66.6 144 35.4
Psat1g076560 Pisum sativum HOM05D009811 ORTHO05D007166 4.6e-09 66.6 100 42.0
Medtr3g055517 Medicago truncatula HOM05D007930 ORTHO05D030188 1.0e-08 65.5 105 37.1
Ca_25708_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 3.0e-08 63.9 100 35.0
Sopen02g002150 Solanum pennellii HOM05D000107 ORTHO05D000062 3.0e-08 63.9 205 30.2
Psat0s2928g0040 Pisum sativum HOM05D009811 ORTHO05D007166 5.1e-08 63.2 76 48.7
Psat1g098040 Pisum sativum HOM05D009811 ORTHO05D007166 5.1e-08 63.2 76 48.7
EL10Ac1g01843 Beta vulgaris HOM05D009343 ORTHO05D011970 1.1e-07 62.0 222 25.7
arahy.Tifrunner.gnm1.ann1.HKAM97 Arachis hypogaea HOM05D010482 ORTHO05D000385 1.5e-07 61.6 256 22.3
Psat6g116840 Pisum sativum HOM05D008859 ORTHO05D007166 1.5e-07 61.6 140 29.3
TPR.G18975 Trifolium pratense HOM05D007930 ORTHO05D030188 1.5e-07 61.6 109 33.0
Medtr5g061300 Medicago truncatula HOM05D004615 ORTHO05D000385 1.9e-07 61.2 117 33.3
TPR.G17520 Trifolium pratense HOM05D008859 ORTHO05D007166 1.9e-07 61.2 100 33.0
EL10Ac9g22741 Beta vulgaris HOM05D009343 ORTHO05D011970 2.5e-07 60.8 222 25.7
PGSC0003DMG400043533 Solanum tuberosum HOM05D007930 ORTHO05D007166 2.5e-07 60.8 37 81.1
PGSC0003DMG400023207 Solanum tuberosum HOM05D007930 ORTHO05D003213 3.3e-07 60.5 80 42.5
Psat7g246320 Pisum sativum HOM05D009811 ORTHO05D007166 5.6e-07 59.7 104 38.5
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 9.6e-07 58.9 135 33.3
Sopen02g004360 Solanum pennellii HOM05D007930 ORTHO05D007166 9.6e-07 58.9 57 56.1
TWI31G0781 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 9.6e-07 58.9 117 33.3
Lsat_1_v5_gn_9_120520 Lactuca sativa HOM05D001309 ORTHO05D005970 1.2e-06 58.5 138 29.7
Hund31150 Selenicereus undatus HOM05D004615 ORTHO05D000385 1.2e-06 58.5 122 36.1
Actinidia39002 Actinidia chinensis HOM05D001309 ORTHO05D000385 1.6e-06 58.2 145 30.3
AL1G63190 Arabidopsis lyrata HOM05D008309 ORTHO05D010308 2.1e-06 57.8 125 31.2
arahy.Tifrunner.gnm1.ann1.LQJ2G8 Arachis hypogaea HOM05D010482 ORTHO05D000385 6.2e-06 56.2 189 27.0


User provided reference genes

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