Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g015040 Solanum pennellii HOM05D000963 ORTHO05D011117 5.7e-80 300.8 150 100.0
unitig_8.g4107 Utricularia gibba HOM05D000963 ORTHO05D011117 5.0e-76 287.7 150 96.0
TAR633G1337 Trochodendron aralioides HOM05D001070 ORTHO05D002096 2.6e-48 195.7 119 84.0
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.2e-47 192.6 106 93.4
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.2e-47 192.6 106 93.4
MELO3C033790.2 Cucumis melo HOM05D000963 ORTHO05D011117 2.7e-45 185.7 95 98.9
BcaC04g20703 Brassica carinata HOM05D000963 ORTHO05D011117 6.0e-45 184.5 96 95.8
BcaC04g20780 Brassica carinata HOM05D000963 ORTHO05D011117 6.0e-45 184.5 96 95.8
BcaNung07084 Brassica carinata HOM05D000963 ORTHO05D011117 6.0e-45 184.5 96 95.8
C04p22530 Brassica napus HOM05D000963 ORTHO05D011117 6.0e-45 184.5 96 95.8
C09p24690 Brassica napus HOM05D000963 ORTHO05D011117 6.0e-45 184.5 96 95.8
C09p39370 Brassica napus HOM05D000963 ORTHO05D011117 6.0e-45 184.5 96 95.8
BolSC47t61068H Brassica oleracea HOM05D000963 ORTHO05D011117 6.0e-45 184.5 96 95.8
Cpa.g.sc2719.1 Carica papaya HOM05D000963 ORTHO05D011117 2.3e-44 182.6 96 94.8
arahy.Tifrunner.gnm1.ann1.URY1CV Arachis hypogaea HOM05D000533 ORTHO05D011117 3.0e-44 182.2 96 95.8
MELO3C027127.2 Cucumis melo HOM05D000963 ORTHO05D011117 6.6e-44 181.0 95 96.8
Oeu038562.1 Olea europaea HOM05D000963 ORTHO05D011117 6.9e-41 171.0 96 91.7
CSS0012622 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D011117 2.0e-40 169.5 96 89.6
PGSC0003DMG400039021 Solanum tuberosum HOM05D000963 ORTHO05D010201 6.4e-39 164.5 96 86.5
arahy.Tifrunner.gnm1.ann1.UXAL1K Arachis hypogaea HOM05D000963 ORTHO05D011117 2.4e-38 162.5 94 88.3
arahy.Tifrunner.gnm1.ann1.MJQ8WH Arachis hypogaea HOM05D000963 ORTHO05D011117 3.9e-36 155.2 94 85.1
unitig_91.g26528 Utricularia gibba HOM05D000963 ORTHO05D005131 4.0e-33 145.2 74 97.3
MELO3C028157.2 Cucumis melo HOM05D000963 ORTHO05D011117 1.2e-32 143.7 71 100.0
Sopen01g027140 Solanum pennellii HOM05D000963 ORTHO05D011117 8.4e-31 137.5 97 75.3
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 8.7e-28 127.5 70 92.9
BcaB02g11354 Brassica carinata HOM05D000963 ORTHO05D011117 1.9e-27 126.3 66 93.9
EL10As6g23662 Beta vulgaris HOM05D001325 ORTHO05D001540 5.6e-27 124.8 63 96.8
MELO3C028252.2 Cucumis melo HOM05D000963 ORTHO05D011117 1.6e-26 123.2 62 98.4
BcaNung01517 Brassica carinata HOM05D000963 ORTHO05D005131 3.1e-25 119.0 62 93.5
Migut.D01399 Erythranthe guttata HOM05D000963 ORTHO05D011117 7.4e-19 97.8 55 90.9
TAR629G1823 Trochodendron aralioides HOM05D001041 ORTHO05D000846 2.2e-18 96.3 56 89.3
DCAR_001525 Daucus carota HOM05D000963 ORTHO05D005131 6.3e-18 94.7 50 92.0
VMungo1024G0004 Vigna mungo HOM05D000963 ORTHO05D011117 6.3e-18 94.7 70 67.1
arahy.Tifrunner.gnm1.ann1.H1VL0A Arachis hypogaea HOM05D000963 ORTHO05D011117 5.3e-17 91.7 66 71.2
PGSC0003DMG400036067 Solanum tuberosum HOM05D000963 ORTHO05D001540 2.9e-15 85.9 43 95.3
MELO3C030559.2 Cucumis melo HOM05D000963 ORTHO05D011117 6.5e-15 84.7 41 95.1
BraSC143t45648Z Brassica rapa HOM05D000963 ORTHO05D011117 2.5e-14 82.8 42 90.5
Gohir.D12G186150 Gossypium hirsutum HOM05D000963 ORTHO05D011117 5.5e-14 81.6 47 85.1
EL10Ac6g15367 Beta vulgaris HOM05D000963 ORTHO05D011117 9.3e-14 80.9 78 62.8
Hma1.2p1_0016F.1_g010990 Hydrangea macrophylla HOM05D000963 ORTHO05D011117 1.2e-13 80.5 43 90.7
BcaC04g22599 Brassica carinata HOM05D000963 ORTHO05D011117 1.6e-13 80.1 40 92.5
BraSC138t45525Z Brassica rapa HOM05D000963 ORTHO05D011117 3.0e-12 75.9 41 92.7
BraSC58t46452Z Brassica rapa HOM05D000963 ORTHO05D011117 3.0e-12 75.9 43 86.0
Oeu012784.1 Olea europaea HOM05D000963 ORTHO05D005131 1.5e-11 73.6 43 81.4
arahy.Tifrunner.gnm1.ann1.NK9AGX Arachis hypogaea HOM05D000089 ORTHO05D011117 3.3e-11 72.4 38 94.7
Sc22g0004610 Simmondsia chinensis HOM05D000963 ORTHO05D011117 4.8e-10 68.6 42 81.0
Ca_03776_v3 Cicer arietinum L. HOM05D000963 ORTHO05D005131 1.8e-09 66.6 36 94.4
Ca_03777_v3 Cicer arietinum L. HOM05D000963 ORTHO05D005131 1.8e-09 66.6 36 94.4
Nitab4.5_0004841g0030 Nicotiana tabacum HOM05D000963 ORTHO05D005131 3.1e-09 65.9 44 68.2
SHI36891 Sapria himalayana HOM05D000963 ORTHO05D011117 1.0e-07 60.8 32 93.8
arahy.Tifrunner.gnm1.ann1.BMCQ1I Arachis hypogaea HOM05D000963 ORTHO05D005131 3.8e-07 58.9 33 87.9
Solyc10g047410.1 Solanum lycopersicum HOM05D000890 ORTHO05D000697 6.5e-07 58.2 31 87.1
Cfa023002 Carpinus fangiana HOM05D000963 ORTHO05D011117 1.1e-06 57.4 29 89.7
Peaxi162Scf00625g00037 Petunia axillaris HOM05D002660 ORTHO05D003902 9.4e-06 54.3 29 93.1


User provided reference genes

Program Settings